RNA–Protein interactions for RNA: ENST00000476241.2

HNRNPU-209, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,844 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-209ENST00000476241 PDZD8Q8NEN9 1154 aa17.1■□□□□ 0.33
HNRNPU-209ENST00000476241 SPDL1Q96EA4 605 aa17.1■□□□□ 0.33
HNRNPU-209ENST00000476241 SALL1Q9NSC2 1324 aa17.1■□□□□ 0.33
HNRNPU-209ENST00000476241 CCT8L1PA6NM43 557 aa17.1■□□□□ 0.33
HNRNPU-209ENST00000476241 KIAA0391O15091 583 aaKnown RBP17.1■□□□□ 0.33
HNRNPU-209ENST00000476241 FDX1P10109 184 aa17.1■□□□□ 0.33
HNRNPU-209ENST00000476241 AP3M2P53677 418 aa17.1■□□□□ 0.33
HNRNPU-209ENST00000476241 PSMC1P62191 440 aaKnown RBP17.1■□□□□ 0.33
HNRNPU-209ENST00000476241 STXBP2Q15833 593 aa17.1■□□□□ 0.33
HNRNPU-209ENST00000476241 HIF1AQ16665 826 aa17.1■□□□□ 0.33
HNRNPU-209ENST00000476241 FAM129AQ9BZQ8 928 aa17.1■□□□□ 0.33
HNRNPU-209ENST00000476241 HSPBP1Q9NZL4 362 aa17.1■□□□□ 0.33
HNRNPU-209ENST00000476241 CCDC22O60826 627 aa17.1■□□□□ 0.33
HNRNPU-209ENST00000476241 TRPA1O75762 1119 aa17.1■□□□□ 0.33
HNRNPU-209ENST00000476241 MX2P20592 715 aa17.1■□□□□ 0.33
HNRNPU-209ENST00000476241 SIX6OS1Q8N1H7 587 aa17.1■□□□□ 0.33
HNRNPU-209ENST00000476241 BBS5Q8N3I7 341 aa17.1■□□□□ 0.33
HNRNPU-209ENST00000476241 RBM15Q96T37 977 aaKnown RBP eCLIP17.1■□□□□ 0.331e-8■■■□□ 18.1
HNRNPU-209ENST00000476241 HAUS8Q9BT25 410 aa17.1■□□□□ 0.33
HNRNPU-209ENST00000476241 G3BP2Q9UN86 482 aaKnown RBP17.1■□□□□ 0.33
HNRNPU-209ENST00000476241 PCDHA10Q9Y5I2 948 aa17.1■□□□□ 0.33
HNRNPU-209ENST00000476241 HEY1Q9Y5J3 304 aa17.1■□□□□ 0.33
HNRNPU-209ENST00000476241 CFAP69A5D8W1 941 aa17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 GOLGA8CPA6NN73 597 aa17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 KIF1CO43896 1103 aaKnown RBP17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 DDNO94850 711 aaPredicted RBP17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 HP1BP3Q5SSJ5 553 aaPredicted RBP17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 CAPRIN2Q6IMN6 1127 aaKnown RBP17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 P4HA2O15460 535 aa17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 COPB2P35606 906 aa17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 PPP4CP60510 307 aa17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 HERVK_113P62684 666 aa17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 TAF1BQ53T94 588 aaPredicted RBP17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 AGGF1Q8N302 714 aaeCLIP17.09■□□□□ 0.331e-9■■■□□ 16.9
HNRNPU-209ENST00000476241 FAM49AQ9H0Q0 323 aaPredicted RBP17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 SUDS3Q9H7L9 328 aaPredicted RBP17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 JMJD4Q9H9V9 463 aa17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 RRAGCQ9HB90 399 aa17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 RBAKQ9NYW8 714 aaPredicted RBP17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 PCSK1NQ9UHG2 260 aa17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 MAD2L2Q9UI95 211 aa17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 AGO2Q9UKV8 859 aaKnown RBP17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 LDHDQ86WU2 507 aa17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 NUDCD3Q8IVD9 361 aa17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 TPCN2Q8NHX9 752 aa17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 TRIM56Q9BRZ2 755 aaKnown RBP17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 UPF3AQ9H1J1 476 aaKnown RBP17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 SCAF8Q9UPN6 1271 aaKnown RBP17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 KPNA7A9QM74 516 aa17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 PSPC1Q8WXF1 523 aaKnown RBP17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 MTRQ99707 1265 aa17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 FAM167BQ9BTA0 163 aa17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 EHD2Q9NZN4 543 aa17.09■□□□□ 0.33
HNRNPU-209ENST00000476241 ABL1P00519 1130 aa17.08■□□□□ 0.33
HNRNPU-209ENST00000476241 GNAT1P11488 350 aa17.08■□□□□ 0.33
HNRNPU-209ENST00000476241 SDC4P31431 198 aa17.08■□□□□ 0.33
HNRNPU-209ENST00000476241 BCAR1P56945 870 aa17.08■□□□□ 0.33
HNRNPU-209ENST00000476241 AP2B1P63010 937 aa17.08■□□□□ 0.33
HNRNPU-209ENST00000476241 GRB10Q13322 594 aa17.08■□□□□ 0.33
HNRNPU-209ENST00000476241 SWSAP1Q6NVH7 229 aa17.08■□□□□ 0.33
HNRNPU-209ENST00000476241 RCOR2Q8IZ40 523 aa17.08■□□□□ 0.33
HNRNPU-209ENST00000476241 CELF4Q9BZC1 486 aaKnown RBP17.08■□□□□ 0.33
HNRNPU-209ENST00000476241 DBR1Q9UK59 544 aaKnown RBP17.08■□□□□ 0.33
HNRNPU-209ENST00000476241 PDHA1P08559 390 aa17.08■□□□□ 0.32
HNRNPU-209ENST00000476241 CETPP11597 493 aa17.08■□□□□ 0.32
HNRNPU-209ENST00000476241 COMTP21964 271 aa17.08■□□□□ 0.32
HNRNPU-209ENST00000476241 MYCBPAPQ8TBZ2 947 aa17.08■□□□□ 0.32
HNRNPU-209ENST00000476241 CASKIN2Q8WXE0 1202 aa17.08■□□□□ 0.32
HNRNPU-209ENST00000476241 ALKBH8Q96BT7 664 aaKnown RBP17.08■□□□□ 0.32
HNRNPU-209ENST00000476241 FAM161BQ96MY7 647 aa17.08■□□□□ 0.32
HNRNPU-209ENST00000476241 YIPF3Q9GZM5 350 aa17.08■□□□□ 0.32
HNRNPU-209ENST00000476241 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.08■□□□□ 0.32
HNRNPU-209ENST00000476241 FAM47DPA6NHR8 397 aa17.08■□□□□ 0.32
HNRNPU-209ENST00000476241 NDUFB10O96000 172 aa17.08■□□□□ 0.32
HNRNPU-209ENST00000476241 SKIV2LQ15477 1246 aaKnown RBP17.08■□□□□ 0.32
HNRNPU-209ENST00000476241 LONRF1Q17RB8 773 aa17.08■□□□□ 0.32
HNRNPU-209ENST00000476241 TTC39CQ8N584 583 aa17.08■□□□□ 0.32
HNRNPU-209ENST00000476241 HIPK4Q8NE63 616 aa17.08■□□□□ 0.32
HNRNPU-209ENST00000476241 VPS39Q96JC1 886 aa17.08■□□□□ 0.32
HNRNPU-209ENST00000476241 MTIF3Q9H2K0 278 aaKnown RBP17.08■□□□□ 0.32
HNRNPU-209ENST00000476241 ENTPD3O75355 529 aa17.08■□□□□ 0.32
HNRNPU-209ENST00000476241 OATP04181 439 aa17.08■□□□□ 0.32
HNRNPU-209ENST00000476241 HNRNPH1P31943 449 aaKnown RBP17.08■□□□□ 0.32
HNRNPU-209ENST00000476241 ARL13BQ3SXY8 428 aa17.08■□□□□ 0.32
HNRNPU-209ENST00000476241 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.08■□□□□ 0.327e-6■■■■■ 37.6
HNRNPU-209ENST00000476241 DCLK2Q8N568 766 aa17.08■□□□□ 0.32
HNRNPU-209ENST00000476241 FAM151AQ8WW52 585 aa17.08■□□□□ 0.32
HNRNPU-209ENST00000476241 C9orf72Q96LT7 481 aa17.08■□□□□ 0.32
HNRNPU-209ENST00000476241 LBHD1Q9BQE6 289 aaPredicted RBP17.08■□□□□ 0.32
HNRNPU-209ENST00000476241 PABPC3Q9H361 631 aaKnown RBP17.08■□□□□ 0.32
HNRNPU-209ENST00000476241 PRDM5Q9NQX1 630 aaPredicted RBP17.08■□□□□ 0.32
HNRNPU-209ENST00000476241 FGFR2P21802 821 aa17.07■□□□□ 0.32
HNRNPU-209ENST00000476241 TNFAIP2Q03169 654 aa17.07■□□□□ 0.32
HNRNPU-209ENST00000476241 SLC29A2Q14542 456 aa17.07■□□□□ 0.32
HNRNPU-209ENST00000476241 MAP1SQ66K74 1059 aaPredicted RBP17.07■□□□□ 0.32
HNRNPU-209ENST00000476241 PIP4K2CQ8TBX8 421 aa17.07■□□□□ 0.32
HNRNPU-209ENST00000476241 MMP19Q99542 508 aa17.07■□□□□ 0.32
HNRNPU-209ENST00000476241 WWP1Q9H0M0 922 aa17.07■□□□□ 0.32
HNRNPU-209ENST00000476241 GBA2Q9HCG7 927 aaPredicted RBP17.07■□□□□ 0.32
HNRNPU-209ENST00000476241 MAP2P11137 1827 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms