RNA–Protein interactions for RNA: ENST00000475716.5

SNX5-208, Transcript of sorting nexin 5, human

TSL 3

Gene SNX5, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNX5-208	ENST00000475716	CREM	Q03060	361 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	AAMP	Q13685	434 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	RAB33A	Q14088	237 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	ACAP1	Q15027	740 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	AMHR2	Q16671	573 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	UVSSA	Q2YD98	709 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	ADCK5	Q3MIX3	580 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	FAM78A	Q5JUQ0	283 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	NOTUM	Q6P988	496 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	DHX32	Q7L7V1	743 aa	Known RBP	11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	FERMT3	Q86UX7	667 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	FAM160A2	Q8N612	972 aa	Predicted RBP	11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	TBCK	Q8TEA7	893 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	SLC7A3	Q8WY07	619 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	PIK3R5	Q8WYR1	880 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	ELSPBP1	Q96BH3	223 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	TCEAL4	Q96EI5	215 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	ZSWIM3	Q96MP5	696 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	BRD9	Q9H8M2	597 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	VPS54	Q9P1Q0	977 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	ZMIZ1	Q9ULJ6	1067 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	SDK1	Q7Z5N4	2213 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	CYP3A7-CYP3A51P	A0A087WV96	503 aa		11.1	□□□□□ -0.63
SNX5-208	ENST00000475716	INO80B-WBP1	J3KQ70	363 aa		11.1	□□□□□ -0.63
SNX5-208	ENST00000475716		K7ESF4	209 aa		11.1	□□□□□ -0.63
SNX5-208	ENST00000475716	ASAP2	O43150	1006 aa		11.1	□□□□□ -0.63
SNX5-208	ENST00000475716	NPTXR	O95502	500 aa		11.1	□□□□□ -0.63
SNX5-208	ENST00000475716	ARF4	P18085	180 aa	Predicted RBP	11.1	□□□□□ -0.63
SNX5-208	ENST00000475716	CYP3A7	P24462	503 aa		11.1	□□□□□ -0.63
SNX5-208	ENST00000475716	AXL	P30530	894 aa		11.1	□□□□□ -0.63
SNX5-208	ENST00000475716	GDI1	P31150	447 aa		11.1	□□□□□ -0.63
SNX5-208	ENST00000475716	QARS	P47897	775 aa	Known RBP	11.1	□□□□□ -0.63
SNX5-208	ENST00000475716	PPP2R5D	Q14738	602 aa		11.1	□□□□□ -0.63
SNX5-208	ENST00000475716	AASDH	Q4L235	1098 aa	Predicted RBP	11.1	□□□□□ -0.63
SNX5-208	ENST00000475716	WDR44	Q5JSH3	913 aa		11.1	□□□□□ -0.63
SNX5-208	ENST00000475716	MAP4K3	Q8IVH8	894 aa		11.1	□□□□□ -0.63
SNX5-208	ENST00000475716	RASEF	Q8IZ41	740 aa		11.1	□□□□□ -0.63
SNX5-208	ENST00000475716	ETNPPL	Q8TBG4	499 aa		11.1	□□□□□ -0.63
SNX5-208	ENST00000475716	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.1	□□□□□ -0.63
SNX5-208	ENST00000475716	DDX1	Q92499	740 aa	Known RBP	11.1	□□□□□ -0.63
SNX5-208	ENST00000475716	DNASE1L2	Q92874	299 aa		11.1	□□□□□ -0.63
SNX5-208	ENST00000475716	TRMT61B	Q9BVS5	477 aa	Known RBP	11.1	□□□□□ -0.63
SNX5-208	ENST00000475716	TRIM6	Q9C030	488 aa	Predicted RBP	11.1	□□□□□ -0.63
SNX5-208	ENST00000475716	ARRDC1-AS1	Q9H2J1	176 aa		11.1	□□□□□ -0.63
SNX5-208	ENST00000475716	SMOC1	Q9H4F8	434 aa		11.1	□□□□□ -0.63
SNX5-208	ENST00000475716	ZNF334	Q9HCZ1	680 aa	Predicted RBP	11.1	□□□□□ -0.63
SNX5-208	ENST00000475716	RBM12	Q9NTZ6	932 aa	Known RBP	11.1	□□□□□ -0.63
SNX5-208	ENST00000475716	GDE1	Q9NZC3	331 aa		11.1	□□□□□ -0.63
SNX5-208	ENST00000475716	SF3B1	O75533	1304 aa	Known RBP eCLIP	11.09	□□□□□ -0.63
SNX5-208	ENST00000475716	KCNK5	O95279	499 aa		11.09	□□□□□ -0.63
SNX5-208	ENST00000475716	POU2F2	P09086	479 aa		11.09	□□□□□ -0.63
SNX5-208	ENST00000475716	CPA1	P15085	419 aa		11.09	□□□□□ -0.63
SNX5-208	ENST00000475716	PTPN2	P17706	415 aa		11.09	□□□□□ -0.63
SNX5-208	ENST00000475716	CCNE1	P24864	410 aa		11.09	□□□□□ -0.63
SNX5-208	ENST00000475716	RFC5	P40937	340 aa		11.09	□□□□□ -0.63
SNX5-208	ENST00000475716	VIPR2	P41587	438 aa		11.09	□□□□□ -0.63
SNX5-208	ENST00000475716	CCR2	P41597	374 aa		11.09	□□□□□ -0.63
SNX5-208	ENST00000475716	MBTD1	Q05BQ5	628 aa		11.09	□□□□□ -0.63
SNX5-208	ENST00000475716	NCBP1	Q09161	790 aa	Known RBP	11.09	□□□□□ -0.63
SNX5-208	ENST00000475716	GRIK3	Q13003	919 aa		11.09	□□□□□ -0.63
SNX5-208	ENST00000475716	EMC2	Q15006	297 aa		11.09	□□□□□ -0.63
SNX5-208	ENST00000475716	STPG1	Q5TH74	334 aa		11.09	□□□□□ -0.63
SNX5-208	ENST00000475716	LONP2	Q86WA8	852 aa		11.09	□□□□□ -0.63
SNX5-208	ENST00000475716	BICD2	Q8TD16	824 aa		11.09	□□□□□ -0.63
SNX5-208	ENST00000475716	ASAP3	Q8TDY4	903 aa		11.09	□□□□□ -0.63
SNX5-208	ENST00000475716	CCDC51	Q96ER9	411 aa		11.09	□□□□□ -0.63
SNX5-208	ENST00000475716	ESYT1	Q9BSJ8	1104 aa		11.09	□□□□□ -0.63
SNX5-208	ENST00000475716	SLK	Q9H2G2	1235 aa	Predicted RBP	11.09	□□□□□ -0.63
SNX5-208	ENST00000475716	ZFP14	Q9HCL3	533 aa		11.09	□□□□□ -0.63
SNX5-208	ENST00000475716	XPNPEP1	Q9NQW7	623 aa		11.09	□□□□□ -0.63
SNX5-208	ENST00000475716	RGL1	Q9NZL6	768 aa		11.09	□□□□□ -0.63
SNX5-208	ENST00000475716	CDY1	Q9Y6F8	540 aa		11.09	□□□□□ -0.63
SNX5-208	ENST00000475716	PIAS3	Q9Y6X2	628 aa		11.09	□□□□□ -0.63
SNX5-208	ENST00000475716	LAMA1	P25391	3075 aa		11.09	□□□□□ -0.63
SNX5-208	ENST00000475716	IGF2R	P11717	2491 aa		11.08	□□□□□ -0.64
SNX5-208	ENST00000475716	NBEA	Q8NFP9	2946 aa		11.08	□□□□□ -0.64
SNX5-208	ENST00000475716	AKAP13	Q12802	2813 aa		11.08	□□□□□ -0.64
SNX5-208	ENST00000475716	PTGES	O14684	152 aa		11.08	□□□□□ -0.64
SNX5-208	ENST00000475716	TOP3B	O95985	862 aa	Known RBP	11.08	□□□□□ -0.64
SNX5-208	ENST00000475716	P4HB	P07237	508 aa	Known RBP	11.08	□□□□□ -0.64
SNX5-208	ENST00000475716	SPINK2	P20155	84 aa		11.08	□□□□□ -0.64
SNX5-208	ENST00000475716	LIMK1	P53667	647 aa		11.08	□□□□□ -0.64
SNX5-208	ENST00000475716	TUSC3	Q13454	348 aa		11.08	□□□□□ -0.64
SNX5-208	ENST00000475716	NAB2	Q15742	525 aa		11.08	□□□□□ -0.64
SNX5-208	ENST00000475716	NTRK3	Q16288	839 aa		11.08	□□□□□ -0.64
SNX5-208	ENST00000475716	XKR9	Q5GH70	373 aa		11.08	□□□□□ -0.64
SNX5-208	ENST00000475716	PRSS36	Q5K4E3	855 aa		11.08	□□□□□ -0.64
SNX5-208	ENST00000475716	VIT	Q6UXI7	678 aa		11.08	□□□□□ -0.64
SNX5-208	ENST00000475716		Q6ZS52	159 aa		11.08	□□□□□ -0.64
SNX5-208	ENST00000475716	CEP68	Q76N32	757 aa		11.08	□□□□□ -0.64
SNX5-208	ENST00000475716	TCP11	Q8WWU5	503 aa		11.08	□□□□□ -0.64
SNX5-208	ENST00000475716	IRF7	Q92985	503 aa		11.08	□□□□□ -0.64
SNX5-208	ENST00000475716	CORO1B	Q9BR76	489 aa		11.08	□□□□□ -0.64
SNX5-208	ENST00000475716	LSM14B	Q9BX40	385 aa	Known RBP	11.08	□□□□□ -0.64
SNX5-208	ENST00000475716	ANO2	Q9NQ90	1003 aa		11.08	□□□□□ -0.64
SNX5-208	ENST00000475716	VAV3	Q9UKW4	847 aa		11.08	□□□□□ -0.64
SNX5-208	ENST00000475716	DSP	P15924	2871 aa	Known RBP	11.08	□□□□□ -0.64
SNX5-208	ENST00000475716	PKD1L2	Q7Z442	2459 aa		11.08	□□□□□ -0.64
SNX5-208	ENST00000475716		A0A087WWV3	80 aa		11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms