RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 PDXDC1Q6P996 788 aa22.64■■□□□ 1.21
VPS36-203ENST00000475375 ATRIPQ8WXE1 791 aa22.64■■□□□ 1.21
VPS36-203ENST00000475375 HSD17B14Q9BPX1 270 aa22.64■■□□□ 1.21
VPS36-203ENST00000475375 GPRC5CQ9NQ84 441 aa22.64■■□□□ 1.21
VPS36-203ENST00000475375 MTF2Q9Y483 593 aaPredicted RBP22.64■■□□□ 1.21
VPS36-203ENST00000475375 MYH15Q9Y2K3 1946 aa22.64■■□□□ 1.21
VPS36-203ENST00000475375 STK36Q9NRP7 1315 aa22.63■■□□□ 1.21
VPS36-203ENST00000475375 SPTLC1O15269 473 aa22.63■■□□□ 1.21
VPS36-203ENST00000475375 ADAM12O43184 909 aa22.63■■□□□ 1.21
VPS36-203ENST00000475375 CD72P21854 359 aa22.63■■□□□ 1.21
VPS36-203ENST00000475375 HOXA9P31269 272 aa22.63■■□□□ 1.21
VPS36-203ENST00000475375 AXDND1Q5T1B0 1012 aaPredicted RBP22.63■■□□□ 1.21
VPS36-203ENST00000475375 ZBTB8OSQ8IWT0 167 aa22.63■■□□□ 1.21
VPS36-203ENST00000475375 TM6SF1Q9BZW5 370 aa22.63■■□□□ 1.21
VPS36-203ENST00000475375 TTC12Q9H892 705 aaPredicted RBP22.63■■□□□ 1.21
VPS36-203ENST00000475375 BRMS1Q9HCU9 246 aa22.63■■□□□ 1.21
VPS36-203ENST00000475375 PRMT7Q9NVM4 692 aaPredicted RBP22.63■■□□□ 1.21
VPS36-203ENST00000475375 SNTG2Q9NY99 539 aa22.63■■□□□ 1.21
VPS36-203ENST00000475375 DLL3Q9NYJ7 618 aa22.63■■□□□ 1.21
VPS36-203ENST00000475375 FBXO4Q9UKT5 387 aa22.63■■□□□ 1.21
VPS36-203ENST00000475375 DOCK6Q96HP0 2047 aa22.63■■□□□ 1.21
VPS36-203ENST00000475375 MIA3Q5JRA6 1907 aa22.63■■□□□ 1.21
VPS36-203ENST00000475375 LIG1P18858 919 aa22.62■■□□□ 1.21
VPS36-203ENST00000475375 KRT2P35908 639 aa22.62■■□□□ 1.21
VPS36-203ENST00000475375 TXKP42681 527 aa22.62■■□□□ 1.21
VPS36-203ENST00000475375 NR5A1Q13285 461 aa22.62■■□□□ 1.21
VPS36-203ENST00000475375 PABPC1LQ4VXU2 614 aaKnown RBP22.62■■□□□ 1.21
VPS36-203ENST00000475375 VARS2Q5ST30 1063 aaKnown RBP22.62■■□□□ 1.21
VPS36-203ENST00000475375 ING5Q8WYH8 240 aa22.62■■□□□ 1.21
VPS36-203ENST00000475375 PRIMPOLQ96LW4 560 aa22.62■■□□□ 1.21
VPS36-203ENST00000475375 DDX23Q9BUQ8 820 aaKnown RBP22.62■■□□□ 1.21
VPS36-203ENST00000475375 HCFC1R1Q9NWW0 138 aa22.62■■□□□ 1.21
VPS36-203ENST00000475375 FANCMQ8IYD8 2048 aa22.62■■□□□ 1.21
VPS36-203ENST00000475375 COL4A3Q01955 1670 aa22.62■■□□□ 1.21
VPS36-203ENST00000475375 PTGESO14684 152 aa22.61■■□□□ 1.21
VPS36-203ENST00000475375 N4BP3O15049 544 aa22.61■■□□□ 1.21
VPS36-203ENST00000475375 RECQL4O94761 1208 aa22.61■■□□□ 1.21
VPS36-203ENST00000475375 OR1D2P34982 312 aa22.61■■□□□ 1.21
VPS36-203ENST00000475375 ZBTB41Q5SVQ8 909 aa22.61■■□□□ 1.21
VPS36-203ENST00000475375 PPP4R3CPQ6ZMV5 832 aa22.61■■□□□ 1.21
VPS36-203ENST00000475375 NPAS3Q8IXF0 933 aa22.61■■□□□ 1.21
VPS36-203ENST00000475375 WASF1Q92558 559 aa22.61■■□□□ 1.21
VPS36-203ENST00000475375 SECISBP2LQ93073 1101 aaKnown RBP22.61■■□□□ 1.21
VPS36-203ENST00000475375 ADPGKQ9BRR6 497 aa22.61■■□□□ 1.21
VPS36-203ENST00000475375 OSBPL6Q9BZF3 934 aa22.61■■□□□ 1.21
VPS36-203ENST00000475375 PDZD7Q9H5P4 517 aa22.61■■□□□ 1.21
VPS36-203ENST00000475375 LTB4R2Q9NPC1 389 aa22.61■■□□□ 1.21
VPS36-203ENST00000475375 ORC3Q9UBD5 711 aaPredicted RBP22.61■■□□□ 1.21
VPS36-203ENST00000475375 PRPF4BQ13523 1007 aaKnown RBP22.6■■□□□ 1.21
VPS36-203ENST00000475375 RSPO2Q6UXX9 243 aaPredicted RBP22.6■■□□□ 1.21
VPS36-203ENST00000475375 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.6■■□□□ 1.21
VPS36-203ENST00000475375 TPRG1Q6ZUI0 275 aa22.6■■□□□ 1.21
VPS36-203ENST00000475375 NOSTRINQ8IVI9 506 aa22.6■■□□□ 1.21
VPS36-203ENST00000475375 DNMT3BQ9UBC3 853 aaKnown RBP22.6■■□□□ 1.21
VPS36-203ENST00000475375 MRPS23Q9Y3D9 190 aaKnown RBP22.6■■□□□ 1.21
VPS36-203ENST00000475375 PCDHGA2Q9Y5H1 932 aa22.6■■□□□ 1.21
VPS36-203ENST00000475375 TTLL13PA6NNM8 815 aa22.59■■□□□ 1.21
VPS36-203ENST00000475375 NEMFO60524 1076 aa22.59■■□□□ 1.21
VPS36-203ENST00000475375 ATP2B1P20020 1258 aa22.59■■□□□ 1.21
VPS36-203ENST00000475375 MAGEA9P43362 315 aa22.59■■□□□ 1.21
VPS36-203ENST00000475375 RAB33AQ14088 237 aa22.59■■□□□ 1.21
VPS36-203ENST00000475375 UVSSAQ2YD98 709 aa22.59■■□□□ 1.21
VPS36-203ENST00000475375 MCPH1Q8NEM0 835 aa22.59■■□□□ 1.21
VPS36-203ENST00000475375 BORCS6Q96GS4 357 aa22.59■■□□□ 1.21
VPS36-203ENST00000475375 C2orf40Q9H1Z8 148 aa22.59■■□□□ 1.21
VPS36-203ENST00000475375 CXCL16Q9H2A7 254 aa22.59■■□□□ 1.21
VPS36-203ENST00000475375 FZD8Q9H461 694 aa22.59■■□□□ 1.21
VPS36-203ENST00000475375 KCNH3Q9ULD8 1083 aa22.59■■□□□ 1.21
VPS36-203ENST00000475375 GDAQ9Y2T3 454 aa22.59■■□□□ 1.21
VPS36-203ENST00000475375 NCAM2O15394 837 aa22.58■■□□□ 1.21
VPS36-203ENST00000475375 MAPK6Q16659 721 aa22.58■■□□□ 1.21
VPS36-203ENST00000475375 FAM187BQ17R55 369 aa22.58■■□□□ 1.21
VPS36-203ENST00000475375 CDCA2Q69YH5 1023 aaPredicted RBP22.58■■□□□ 1.21
VPS36-203ENST00000475375 MCRS1Q96EZ8 462 aa22.58■■□□□ 1.21
VPS36-203ENST00000475375 ZSCAN32Q9NX65 697 aa22.58■■□□□ 1.21
VPS36-203ENST00000475375 SMG5Q9UPR3 1016 aaKnown RBP22.58■■□□□ 1.21
VPS36-203ENST00000475375 USP20Q9Y2K6 914 aa22.58■■□□□ 1.21
VPS36-203ENST00000475375 CDY1Q9Y6F8 540 aa22.58■■□□□ 1.21
VPS36-203ENST00000475375 EPB41L2O43491 1005 aaKnown RBP22.57■■□□□ 1.2
VPS36-203ENST00000475375 PFKFB2O60825 505 aa22.57■■□□□ 1.2
VPS36-203ENST00000475375 B3GAT3O94766 335 aa22.57■■□□□ 1.2
VPS36-203ENST00000475375 PRKCBP05771 671 aa22.57■■□□□ 1.2
VPS36-203ENST00000475375 POU2F2P09086 479 aa22.57■■□□□ 1.2
VPS36-203ENST00000475375 XRCC6P12956 609 aaKnown RBP eCLIP22.57■■□□□ 1.2
VPS36-203ENST00000475375 TARSP26639 723 aaKnown RBP22.57■■□□□ 1.2
VPS36-203ENST00000475375 NAB2Q15742 525 aa22.57■■□□□ 1.2
VPS36-203ENST00000475375 TSSK4Q6SA08 328 aa22.57■■□□□ 1.2
VPS36-203ENST00000475375 GPR161Q8N6U8 529 aaKnown RBP22.57■■□□□ 1.2
VPS36-203ENST00000475375 NELL2Q99435 816 aa22.57■■□□□ 1.2
VPS36-203ENST00000475375 TPCN1Q9ULQ1 816 aa22.57■■□□□ 1.2
VPS36-203ENST00000475375 ECI2O75521 394 aa22.56■■□□□ 1.2
VPS36-203ENST00000475375 SDHBP21912 280 aa22.56■■□□□ 1.2
VPS36-203ENST00000475375 FGFR3P22607 806 aa22.56■■□□□ 1.2
VPS36-203ENST00000475375 GLRA4Q5JXX5 417 aa22.56■■□□□ 1.2
VPS36-203ENST00000475375 ZNF852Q6ZMS4 543 aa22.56■■□□□ 1.2
VPS36-203ENST00000475375 DEPTORQ8TB45 409 aa22.56■■□□□ 1.2
VPS36-203ENST00000475375 TNFRSF25Q93038 417 aa22.56■■□□□ 1.2
VPS36-203ENST00000475375 HEBP1Q9NRV9 189 aa22.56■■□□□ 1.2
VPS36-203ENST00000475375 MTRRQ9UBK8 725 aa22.56■■□□□ 1.2
VPS36-203ENST00000475375 MRPS17Q9Y2R5 130 aaKnown RBP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms