RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 SNX5Q9Y5X3 404 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 CHD1O14646 1710 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 RTN2O75298 545 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 C6orf222P0C671 652 aaPredicted RBP11.57□□□□□ -0.56
VAPB-204ENST00000475243 CC2D1AQ6P1N0 951 aaPredicted RBP11.57□□□□□ -0.56
VAPB-204ENST00000475243 PYGBP11216 843 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 AP2B1P63010 937 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 ATP11CQ8NB49 1132 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 RNPC3Q96LT9 517 aaKnown RBP11.57□□□□□ -0.56
VAPB-204ENST00000475243 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.57□□□□□ -0.56
VAPB-204ENST00000475243 NOP53Q9NZM5 478 aaKnown RBP11.57□□□□□ -0.56
VAPB-204ENST00000475243 DYNC1LI2O43237 492 aaPredicted RBP11.57□□□□□ -0.56
VAPB-204ENST00000475243 HAUS5O94927 633 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 MYBL1P10243 752 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 NUMBP49757 651 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 ATXN3P54252 364 aaPredicted RBP11.57□□□□□ -0.56
VAPB-204ENST00000475243 LRRC74AQ0VAA2 488 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 PLA2G4FQ68DD2 849 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 SLC35G2Q8TBE7 412 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 EPAS1Q99814 870 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 BPIFA3Q9BQP9 254 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 HERC5Q9UII4 1024 aaKnown RBP11.57□□□□□ -0.56
VAPB-204ENST00000475243 ASAP2O43150 1006 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 MYO1DO94832 1006 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 ZFXP17010 805 aaPredicted RBP11.57□□□□□ -0.56
VAPB-204ENST00000475243 FRMD5Q7Z6J6 570 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 CDKL3Q8IVW4 592 aaPredicted RBP11.57□□□□□ -0.56
VAPB-204ENST00000475243 MFN1Q8IWA4 741 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 MICALL2Q8IY33 904 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 MCEEQ96PE7 176 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 CHCHD3Q9NX63 227 aaKnown RBP11.57□□□□□ -0.56
VAPB-204ENST00000475243 HSPBP1Q9NZL4 362 aa11.57□□□□□ -0.56
VAPB-204ENST00000475243 TCP11X1B4DZS4 312 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 DEUP1Q05D60 604 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 IL31Q6EBC2 164 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 SP8Q8IXZ3 490 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 GUF1Q8N442 669 aaKnown RBP11.56□□□□□ -0.56
VAPB-204ENST00000475243 TNIP3Q96KP6 325 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 FAM167BQ9BTA0 163 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 PLEKHA5Q9HAU0 1116 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 ADGRG1Q9Y653 693 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 FAM205CA6NFA0 338 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 ADCK2Q7Z695 626 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 NUP93Q8N1F7 819 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 APPL2Q8NEU8 664 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.56□□□□□ -0.56
VAPB-204ENST00000475243 LIMA1Q9UHB6 759 aaKnown RBP11.56□□□□□ -0.56
VAPB-204ENST00000475243 NRKQ7Z2Y5 1582 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 ACTR2P61160 394 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 COG2Q14746 738 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 ZFATQ9P243 1243 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 PCDHGB4Q9UN71 923 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 EYA4O95677 639 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 ACTN3Q08043 901 aaPredicted RBP11.56□□□□□ -0.56
VAPB-204ENST00000475243 NR1H3Q13133 447 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 CUL3Q13618 768 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 ENOSF1Q7L5Y1 443 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 ICA1LQ8NDH6 482 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 B4GALNT2Q8NHY0 566 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 MUC3BQ9H195 1237 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 RAB6BQ9NRW1 208 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 MAD2L2Q9UI95 211 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 KCNH4Q9UQ05 1017 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 GGPS1O95749 300 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 MAP4P27816 1152 aaKnown RBP11.56□□□□□ -0.56
VAPB-204ENST00000475243 KDSRQ06136 332 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 RAD51Q06609 339 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 WDR48Q8TAF3 677 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 SEPT5Q99719 369 aaPredicted RBP11.56□□□□□ -0.56
VAPB-204ENST00000475243 POLR1AO95602 1720 aaPredicted RBP11.56□□□□□ -0.56
VAPB-204ENST00000475243 SPHKAPQ2M3C7 1700 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 PRRG1O14668 218 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 ENO1P06733 434 aaKnown RBP11.56□□□□□ -0.56
VAPB-204ENST00000475243 C12orf60Q5U649 245 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 ZNF513Q8N8E2 541 aaPredicted RBP11.56□□□□□ -0.56
VAPB-204ENST00000475243 BHMTQ93088 406 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 PABPC5Q96DU9 382 aaKnown RBP11.56□□□□□ -0.56
VAPB-204ENST00000475243 ABHD8Q96I13 439 aa11.56□□□□□ -0.56
VAPB-204ENST00000475243 DBR1Q9UK59 544 aaKnown RBP11.56□□□□□ -0.56
VAPB-204ENST00000475243 PDAP1Q13442 181 aaKnown RBP11.55□□□□□ -0.56
VAPB-204ENST00000475243 NCOA4Q13772 614 aa11.55□□□□□ -0.56
VAPB-204ENST00000475243 TMEM132DQ14C87 1099 aa11.55□□□□□ -0.56
VAPB-204ENST00000475243 RFFLQ8WZ73 363 aa11.55□□□□□ -0.56
VAPB-204ENST00000475243 KIFC3Q9BVG8 833 aa11.55□□□□□ -0.56
VAPB-204ENST00000475243 ETNK1Q9HBU6 452 aa11.55□□□□□ -0.56
VAPB-204ENST00000475243 SENP1Q9P0U3 644 aa11.55□□□□□ -0.56
VAPB-204ENST00000475243 TRIM10Q9UDY6 481 aa11.55□□□□□ -0.56
VAPB-204ENST00000475243 PJA2O43164 708 aa11.55□□□□□ -0.56
VAPB-204ENST00000475243 SMTNL2Q2TAL5 461 aa11.55□□□□□ -0.56
VAPB-204ENST00000475243 ZC2HC1CQ53FD0 456 aaPredicted RBP11.55□□□□□ -0.56
VAPB-204ENST00000475243 PPHLN1Q8NEY8 458 aaKnown RBP11.55□□□□□ -0.56
VAPB-204ENST00000475243 NSUN4Q96CB9 384 aaKnown RBP11.55□□□□□ -0.56
VAPB-204ENST00000475243 ZNF560Q96MR9 790 aa11.55□□□□□ -0.56
VAPB-204ENST00000475243 TSC22D3Q99576 134 aa11.55□□□□□ -0.56
VAPB-204ENST00000475243 TMEM117Q9H0C3 514 aa11.55□□□□□ -0.56
VAPB-204ENST00000475243 EML4Q9HC35 981 aaKnown RBP11.55□□□□□ -0.56
VAPB-204ENST00000475243 TUFT1Q9NNX1 390 aa11.55□□□□□ -0.56
VAPB-204ENST00000475243 CDV3Q9UKY7 258 aaKnown RBP11.55□□□□□ -0.56
VAPB-204ENST00000475243 ASB14A6NK59 587 aa11.55□□□□□ -0.56
VAPB-204ENST00000475243 MEFVO15553 781 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms