RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 BCL7CQ8WUZ0 217 aaPredicted RBP12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 SPIRE2Q8WWL2 714 aa12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 MS4A3Q96HJ5 214 aa12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 NTPCRQ9BSD7 190 aaKnown RBP12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 COLEC11Q9BWP8 271 aa12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 MRPL4Q9BYD3 311 aaKnown RBP12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 POLD4Q9HCU8 107 aa12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 ARHGAP28Q9P2N2 729 aa12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 TNFSF13BQ9Y275 285 aa12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 PRG3Q9Y2Y8 225 aaPredicted RBP12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 TTLL13PA6NNM8 815 aa12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 H0YCG3 227 aa12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 GALR2O43603 387 aaPredicted RBP12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 STX6O43752 255 aa12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 SOD2P04179 222 aa12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 PLS3P13797 630 aa12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 ZP2Q05996 745 aa12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 MAPK7Q13164 816 aa12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 ANKRD54Q6NXT1 300 aa12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 DNAJC14Q6Y2X3 702 aaPredicted RBP12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 PPFIBP1Q86W92 1011 aa12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 HSCBQ8IWL3 235 aa12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 GSTCDQ8NEC7 633 aa12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 VN1R2Q8NFZ6 395 aa12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 CCDC97Q96F63 343 aaPredicted RBP12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 TIGD1Q96MW7 591 aa12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 PLIN2Q99541 437 aa12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 C1QTNF1Q9BXJ1 281 aa12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 EMILIN2Q9BXX0 1053 aa12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 MARCH5Q9NX47 278 aa12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 MIOSQ9NXC5 875 aa12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 SNTG2Q9NY99 539 aa12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 FAM13BQ9NYF5 915 aa12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 LARSQ9P2J5 1176 aaKnown RBP12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 ODF2LQ9ULJ1 636 aa12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 MTMR6Q9Y217 621 aa12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 HCFC2Q9Y5Z7 792 aa12.62□□□□□ -0.39
HLA-DOB-208ENST00000475235 CUL9Q8IWT3 2517 aa12.61□□□□□ -0.39
HLA-DOB-208ENST00000475235 CLASP2O75122 1294 aaKnown RBP12.61□□□□□ -0.39
HLA-DOB-208ENST00000475235 RECQL4O94761 1208 aa12.61□□□□□ -0.39
HLA-DOB-208ENST00000475235 EDN1P05305 212 aa12.61□□□□□ -0.39
HLA-DOB-208ENST00000475235 URODP06132 367 aa12.61□□□□□ -0.39
HLA-DOB-208ENST00000475235 FOXD4Q12950 439 aaPredicted RBP12.61□□□□□ -0.39
HLA-DOB-208ENST00000475235 STRN3Q13033 797 aa12.61□□□□□ -0.39
HLA-DOB-208ENST00000475235 TUSC3Q13454 348 aa12.61□□□□□ -0.39
HLA-DOB-208ENST00000475235 NFKBIBQ15653 356 aa12.61□□□□□ -0.39
HLA-DOB-208ENST00000475235 PTPN14Q15678 1187 aa12.61□□□□□ -0.39
HLA-DOB-208ENST00000475235 HSP90B2PQ58FF3 399 aa12.61□□□□□ -0.39
HLA-DOB-208ENST00000475235 NT5DC1Q5TFE4 455 aa12.61□□□□□ -0.39
HLA-DOB-208ENST00000475235 EEF1DP3Q658K8 133 aa12.61□□□□□ -0.39
HLA-DOB-208ENST00000475235 LLGL2Q6P1M3 1020 aa12.61□□□□□ -0.39
HLA-DOB-208ENST00000475235 CREBRFQ8IUR6 639 aa12.61□□□□□ -0.39
HLA-DOB-208ENST00000475235 HERC2P3Q9BVR0 1158 aa12.61□□□□□ -0.39
HLA-DOB-208ENST00000475235 CCSER1Q9C0I3 900 aa12.61□□□□□ -0.39
HLA-DOB-208ENST00000475235 MRPL17Q9NRX2 175 aaKnown RBP12.61□□□□□ -0.39
HLA-DOB-208ENST00000475235 KLK14Q9P0G3 267 aa12.61□□□□□ -0.39
HLA-DOB-208ENST00000475235 CLIC4Q9Y696 253 aa12.61□□□□□ -0.39
HLA-DOB-208ENST00000475235 MORC2Q9Y6X9 1032 aaPredicted RBP12.61□□□□□ -0.39
HLA-DOB-208ENST00000475235 PLXNA4Q9HCM2 1894 aa12.6□□□□□ -0.39
HLA-DOB-208ENST00000475235 THP07101 528 aa12.6□□□□□ -0.39
HLA-DOB-208ENST00000475235 TXLNAP40222 546 aa12.6□□□□□ -0.39
HLA-DOB-208ENST00000475235 RAD51AP2Q09MP3 1159 aa12.6□□□□□ -0.39
HLA-DOB-208ENST00000475235 PTPAQ15257 358 aa12.6□□□□□ -0.39
HLA-DOB-208ENST00000475235 ZNF568Q3ZCX4 644 aa12.6□□□□□ -0.39
HLA-DOB-208ENST00000475235 ACO2Q99798 780 aaKnown RBP12.6□□□□□ -0.39
HLA-DOB-208ENST00000475235 VN1R3Q9BXE9 311 aa12.6□□□□□ -0.39
HLA-DOB-208ENST00000475235 GZF1Q9H116 711 aaPredicted RBP12.6□□□□□ -0.39
HLA-DOB-208ENST00000475235 CD320Q9NPF0 282 aa12.6□□□□□ -0.39
HLA-DOB-208ENST00000475235 TOPORSQ9NS56 1045 aaPredicted RBP12.6□□□□□ -0.39
HLA-DOB-208ENST00000475235 DZANK1Q9NVP4 752 aa12.6□□□□□ -0.39
HLA-DOB-208ENST00000475235 CGNQ9P2M7 1197 aaKnown RBP12.6□□□□□ -0.39
HLA-DOB-208ENST00000475235 CCDC39Q9UFE4 941 aa12.6□□□□□ -0.39
HLA-DOB-208ENST00000475235 USP20Q9Y2K6 914 aa12.6□□□□□ -0.39
HLA-DOB-208ENST00000475235 USP15Q9Y4E8 981 aaPredicted RBP12.6□□□□□ -0.39
HLA-DOB-208ENST00000475235 PAXBP1Q9Y5B6 917 aa12.6□□□□□ -0.39
HLA-DOB-208ENST00000475235 PCDHB13Q9Y5F0 798 aa12.6□□□□□ -0.39
HLA-DOB-208ENST00000475235 SRPRBQ9Y5M8 271 aaKnown RBP12.6□□□□□ -0.39
HLA-DOB-208ENST00000475235 SFI1A8K8P3 1242 aa12.59□□□□□ -0.39
HLA-DOB-208ENST00000475235 SLC16A4O15374 487 aa12.59□□□□□ -0.39
HLA-DOB-208ENST00000475235 KRT18P05783 430 aaKnown RBP12.59□□□□□ -0.39
HLA-DOB-208ENST00000475235 MCF2P10911 925 aa12.59□□□□□ -0.39
HLA-DOB-208ENST00000475235 ALADP13716 330 aa12.59□□□□□ -0.39
HLA-DOB-208ENST00000475235 PLCG1P19174 1290 aa12.59□□□□□ -0.39
HLA-DOB-208ENST00000475235 ABCD1P33897 745 aa12.59□□□□□ -0.39
HLA-DOB-208ENST00000475235 GRM5P41594 1212 aa12.59□□□□□ -0.39
HLA-DOB-208ENST00000475235 GLUD2P49448 558 aa12.59□□□□□ -0.39
HLA-DOB-208ENST00000475235 YARSP54577 528 aaKnown RBP12.59□□□□□ -0.39
HLA-DOB-208ENST00000475235 GRIN1Q05586 938 aa12.59□□□□□ -0.39
HLA-DOB-208ENST00000475235 ITIH3Q06033 890 aa12.59□□□□□ -0.39
HLA-DOB-208ENST00000475235 KARSQ15046 597 aaKnown RBP12.59□□□□□ -0.39
HLA-DOB-208ENST00000475235 C11orf91Q3C1V1 193 aa12.59□□□□□ -0.39
HLA-DOB-208ENST00000475235 KIAA1841Q6NSI8 718 aa12.59□□□□□ -0.39
HLA-DOB-208ENST00000475235 CES5AQ6NT32 575 aa12.59□□□□□ -0.39
HLA-DOB-208ENST00000475235 GPBP1Q86WP2 473 aa12.59□□□□□ -0.39
HLA-DOB-208ENST00000475235 GPR65Q8IYL9 337 aa12.59□□□□□ -0.39
HLA-DOB-208ENST00000475235 RNF168Q8IYW5 571 aaPredicted RBP12.59□□□□□ -0.39
HLA-DOB-208ENST00000475235 TMEM161BQ8NDZ6 487 aa12.59□□□□□ -0.39
HLA-DOB-208ENST00000475235 AUTS2Q8WXX7 1259 aa12.59□□□□□ -0.39
HLA-DOB-208ENST00000475235 SUSD6Q92537 303 aa12.59□□□□□ -0.39
HLA-DOB-208ENST00000475235 RAD54LQ92698 747 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms