RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 SAFBQ15424 915 aaKnown RBP eCLIP27.48■■□□□ 1.99
TMEM54-205ENST00000475208 NAB2Q15742 525 aa27.48■■□□□ 1.99
TMEM54-205ENST00000475208 PPM1LQ5SGD2 360 aa27.48■■□□□ 1.99
TMEM54-205ENST00000475208 SLC2A4RGQ9NR83 387 aa27.48■■□□□ 1.99
TMEM54-205ENST00000475208 ZFP37Q9Y6Q3 630 aaPredicted RBP27.48■■□□□ 1.99
TMEM54-205ENST00000475208 ADAM12O43184 909 aa27.47■■□□□ 1.99
TMEM54-205ENST00000475208 C8AP07357 584 aa27.47■■□□□ 1.99
TMEM54-205ENST00000475208 OR52Z1P0C646 297 aa27.47■■□□□ 1.99
TMEM54-205ENST00000475208 SPECC1Q5M775 1068 aa27.47■■□□□ 1.99
TMEM54-205ENST00000475208 EEF1DP3Q658K8 133 aa27.47■■□□□ 1.99
TMEM54-205ENST00000475208 PHLDB3Q6NSJ2 640 aa27.47■■□□□ 1.99
TMEM54-205ENST00000475208 CDH7Q9ULB5 785 aa27.47■■□□□ 1.99
TMEM54-205ENST00000475208 GDAQ9Y2T3 454 aa27.47■■□□□ 1.99
TMEM54-205ENST00000475208 HOXA9P31269 272 aa27.46■■□□□ 1.99
TMEM54-205ENST00000475208 PPP2R5AQ15172 486 aa27.46■■□□□ 1.99
TMEM54-205ENST00000475208 PDXDC1Q6P996 788 aa27.46■■□□□ 1.99
TMEM54-205ENST00000475208 KIFC3Q9BVG8 833 aa27.46■■□□□ 1.99
TMEM54-205ENST00000475208 DOCK6Q96HP0 2047 aa27.46■■□□□ 1.99
TMEM54-205ENST00000475208 GVINP1Q7Z2Y8 2422 aa27.46■■□□□ 1.99
TMEM54-205ENST00000475208 CCL16O15467 120 aa27.45■■□□□ 1.98
TMEM54-205ENST00000475208 DCNP07585 359 aaKnown RBP27.45■■□□□ 1.98
TMEM54-205ENST00000475208 ZNF174Q15697 407 aa27.45■■□□□ 1.98
TMEM54-205ENST00000475208 DCAF4L1Q3SXM0 396 aa27.45■■□□□ 1.98
TMEM54-205ENST00000475208 DCLRE1AQ6PJP8 1040 aa27.45■■□□□ 1.98
TMEM54-205ENST00000475208 PARM1Q6UWI2 310 aa27.45■■□□□ 1.98
TMEM54-205ENST00000475208 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.45■■□□□ 1.98
TMEM54-205ENST00000475208 FGF14Q92915 247 aa27.45■■□□□ 1.98
TMEM54-205ENST00000475208 RPP25Q9BUL9 199 aaKnown RBP27.45■■□□□ 1.98
TMEM54-205ENST00000475208 POLIQ9UNA4 740 aa27.45■■□□□ 1.98
TMEM54-205ENST00000475208 VWA8A3KMH1 1905 aa27.45■■□□□ 1.98
TMEM54-205ENST00000475208 XYLBO75191 536 aa27.44■■□□□ 1.98
TMEM54-205ENST00000475208 ORC2Q13416 577 aaPredicted RBP27.44■■□□□ 1.98
TMEM54-205ENST00000475208 SIT1Q9Y3P8 196 aa27.44■■□□□ 1.98
TMEM54-205ENST00000475208 GLRA4Q5JXX5 417 aa27.43■■□□□ 1.98
TMEM54-205ENST00000475208 HAUS3Q68CZ6 603 aa27.43■■□□□ 1.98
TMEM54-205ENST00000475208 SLC7A14Q8TBB6 771 aa27.43■■□□□ 1.98
TMEM54-205ENST00000475208 FGF13Q92913 245 aa27.43■■□□□ 1.98
TMEM54-205ENST00000475208 C8orf76Q96K31 380 aa27.43■■□□□ 1.98
TMEM54-205ENST00000475208 IFT74Q96LB3 600 aa27.43■■□□□ 1.98
TMEM54-205ENST00000475208 POLD4Q9HCU8 107 aa27.43■■□□□ 1.98
TMEM54-205ENST00000475208 DLGAP2Q9P1A6 1054 aa27.43■■□□□ 1.98
TMEM54-205ENST00000475208 MYH15Q9Y2K3 1946 aa27.42■■□□□ 1.98
TMEM54-205ENST00000475208 TMEM189-UBE2V1I3L0A0 370 aa27.42■■□□□ 1.98
TMEM54-205ENST00000475208 FGFR3P22607 806 aa27.42■■□□□ 1.98
TMEM54-205ENST00000475208 GPC5P78333 572 aa27.42■■□□□ 1.98
TMEM54-205ENST00000475208 FOXK2Q01167 660 aa27.42■■□□□ 1.98
TMEM54-205ENST00000475208 RAB33AQ14088 237 aa27.42■■□□□ 1.98
TMEM54-205ENST00000475208 AXDND1Q5T1B0 1012 aaPredicted RBP27.42■■□□□ 1.98
TMEM54-205ENST00000475208 ATF7IP2Q5U623 682 aa27.42■■□□□ 1.98
TMEM54-205ENST00000475208 ITFG1Q8TB96 612 aa27.42■■□□□ 1.98
TMEM54-205ENST00000475208 KCNG4Q8TDN1 519 aa27.42■■□□□ 1.98
TMEM54-205ENST00000475208 FOXQ1Q9C009 403 aa27.42■■□□□ 1.98
TMEM54-205ENST00000475208 MTRRQ9UBK8 725 aa27.42■■□□□ 1.98
TMEM54-205ENST00000475208 R4GN57 208 aa27.42■■□□□ 1.98
TMEM54-205ENST00000475208 B3GAT3O94766 335 aa27.41■■□□□ 1.98
TMEM54-205ENST00000475208 NEFLP07196 543 aa27.41■■□□□ 1.98
TMEM54-205ENST00000475208 MUTP22033 750 aa27.41■■□□□ 1.98
TMEM54-205ENST00000475208 IGFBP6P24592 240 aaPredicted RBP27.41■■□□□ 1.98
TMEM54-205ENST00000475208 OR1D2P34982 312 aa27.41■■□□□ 1.98
TMEM54-205ENST00000475208 CCT6AP40227 531 aaKnown RBP27.41■■□□□ 1.98
TMEM54-205ENST00000475208 RBM25P49756 843 aaKnown RBP27.41■■□□□ 1.98
TMEM54-205ENST00000475208 EFNA5P52803 228 aa27.41■■□□□ 1.98
TMEM54-205ENST00000475208 ECM1Q16610 540 aa27.41■■□□□ 1.98
TMEM54-205ENST00000475208 TTC38Q5R3I4 469 aa27.41■■□□□ 1.98
TMEM54-205ENST00000475208 NT5DC1Q5TFE4 455 aa27.41■■□□□ 1.98
TMEM54-205ENST00000475208 MTSS1LQ765P7 747 aa27.41■■□□□ 1.98
TMEM54-205ENST00000475208 PJA1Q8NG27 643 aa27.41■■□□□ 1.98
TMEM54-205ENST00000475208 PPP1R10Q96QC0 940 aaKnown RBP27.41■■□□□ 1.98
TMEM54-205ENST00000475208 BHMT2Q9H2M3 363 aa27.41■■□□□ 1.98
TMEM54-205ENST00000475208 FOXP1Q9H334 677 aaPredicted RBP27.41■■□□□ 1.98
TMEM54-205ENST00000475208 SEMA4AQ9H3S1 761 aa27.41■■□□□ 1.98
TMEM54-205ENST00000475208 LMNAP02545 664 aaKnown RBP27.4■■□□□ 1.98
TMEM54-205ENST00000475208 POU2F2P09086 479 aa27.4■■□□□ 1.98
TMEM54-205ENST00000475208 CLCNKBP51801 687 aa27.4■■□□□ 1.98
TMEM54-205ENST00000475208 CCDC83Q8IWF9 413 aa27.4■■□□□ 1.98
TMEM54-205ENST00000475208 KIFAP3Q92845 792 aa27.4■■□□□ 1.98
TMEM54-205ENST00000475208 SHDQ96IW2 340 aa27.4■■□□□ 1.98
TMEM54-205ENST00000475208 HCFC1R1Q9NWW0 138 aa27.4■■□□□ 1.98
TMEM54-205ENST00000475208 STARD6P59095 220 aa27.39■■□□□ 1.98
TMEM54-205ENST00000475208 UVSSAQ2YD98 709 aa27.39■■□□□ 1.98
TMEM54-205ENST00000475208 RSPO2Q6UXX9 243 aaPredicted RBP27.39■■□□□ 1.98
TMEM54-205ENST00000475208 APBB1IPQ7Z5R6 666 aaPredicted RBP27.39■■□□□ 1.98
TMEM54-205ENST00000475208 GOLGA2P5Q9HBQ8 144 aa27.39■■□□□ 1.98
TMEM54-205ENST00000475208 CDY1Q9Y6F8 540 aa27.39■■□□□ 1.98
TMEM54-205ENST00000475208 TKTP29401 623 aaKnown RBP27.38■■□□□ 1.97
TMEM54-205ENST00000475208 ID4P47928 161 aa27.38■■□□□ 1.97
TMEM54-205ENST00000475208 PABPC1LQ4VXU2 614 aaKnown RBP27.38■■□□□ 1.97
TMEM54-205ENST00000475208 CD300LGQ6UXG3 332 aa27.38■■□□□ 1.97
TMEM54-205ENST00000475208 C1orf210Q8IVY1 113 aa27.38■■□□□ 1.97
TMEM54-205ENST00000475208 UROC1Q96N76 676 aa27.38■■□□□ 1.97
TMEM54-205ENST00000475208 DNMT3BQ9UBC3 853 aaKnown RBP27.38■■□□□ 1.97
TMEM54-205ENST00000475208 DAXXQ9UER7 740 aaPredicted RBP27.38■■□□□ 1.97
TMEM54-205ENST00000475208 I3L4J1 428 aa27.37■■□□□ 1.97
TMEM54-205ENST00000475208 K7ERI5 159 aa27.37■■□□□ 1.97
TMEM54-205ENST00000475208 LRRN2O75325 713 aa27.37■■□□□ 1.97
TMEM54-205ENST00000475208 SP9P0CG40 484 aa27.37■■□□□ 1.97
TMEM54-205ENST00000475208 GLULP15104 373 aa27.37■■□□□ 1.97
TMEM54-205ENST00000475208 FXR2P51116 673 aaKnown RBP eCLIP27.37■■□□□ 1.97
TMEM54-205ENST00000475208 SNW1Q13573 536 aaKnown RBP27.37■■□□□ 1.97
TMEM54-205ENST00000475208 UPP1Q16831 310 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms