RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 HSP90AA4PQ58FG1 418 aa10.89□□□□□ -0.67
COL8A1-206ENST00000474648 XKR4Q5GH76 650 aa10.89□□□□□ -0.67
COL8A1-206ENST00000474648 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.89□□□□□ -0.67
COL8A1-206ENST00000474648 AGMOQ6ZNB7 445 aa10.89□□□□□ -0.67
COL8A1-206ENST00000474648 APTXQ7Z2E3 356 aaKnown RBP10.89□□□□□ -0.67
COL8A1-206ENST00000474648 APBB1IPQ7Z5R6 666 aaPredicted RBP10.89□□□□□ -0.67
COL8A1-206ENST00000474648 FAM186BQ8IYM0 893 aa10.89□□□□□ -0.67
COL8A1-206ENST00000474648 ACAP3Q96P50 834 aa10.89□□□□□ -0.67
COL8A1-206ENST00000474648 TRIM6Q9C030 488 aaPredicted RBP10.89□□□□□ -0.67
COL8A1-206ENST00000474648 C1orf112Q9NSG2 853 aa10.89□□□□□ -0.67
COL8A1-206ENST00000474648 FRMD4BQ9Y2L6 1034 aa10.89□□□□□ -0.67
COL8A1-206ENST00000474648 ALPK3Q96L96 1907 aa10.88□□□□□ -0.67
COL8A1-206ENST00000474648 ABHD14A-ACY1A0A1B0GW23 586 aa10.88□□□□□ -0.67
COL8A1-206ENST00000474648 TTC26A0AVF1 554 aa10.88□□□□□ -0.67
COL8A1-206ENST00000474648 FSD2A1L4K1 749 aa10.88□□□□□ -0.67
COL8A1-206ENST00000474648 LACTBL1A8MY62 500 aa10.88□□□□□ -0.67
COL8A1-206ENST00000474648 KCNJ18B7U540 433 aa10.88□□□□□ -0.67
COL8A1-206ENST00000474648 EOMESO95936 686 aa10.88□□□□□ -0.67
COL8A1-206ENST00000474648 CXCL8P10145 99 aa10.88□□□□□ -0.67
COL8A1-206ENST00000474648 EPB41P11171 864 aaKnown RBP10.88□□□□□ -0.67
COL8A1-206ENST00000474648 SKIP12755 728 aa10.88□□□□□ -0.67
COL8A1-206ENST00000474648 ITGA4P13612 1032 aa10.88□□□□□ -0.67
COL8A1-206ENST00000474648 RAB27AP51159 221 aa10.88□□□□□ -0.67
COL8A1-206ENST00000474648 DLG4P78352 724 aa10.88□□□□□ -0.67
COL8A1-206ENST00000474648 ENPEPQ07075 957 aa10.88□□□□□ -0.67
COL8A1-206ENST00000474648 KCNJ12Q14500 433 aa10.88□□□□□ -0.67
COL8A1-206ENST00000474648 PSMD6Q15008 389 aa10.88□□□□□ -0.67
COL8A1-206ENST00000474648 TCP11X2Q5H9J9 407 aa10.88□□□□□ -0.67
COL8A1-206ENST00000474648 TMEM240Q5SV17 173 aa10.88□□□□□ -0.67
COL8A1-206ENST00000474648 ZNF365Q70YC5 407 aa10.88□□□□□ -0.67
COL8A1-206ENST00000474648 BRSK2Q8IWQ3 736 aa10.88□□□□□ -0.67
COL8A1-206ENST00000474648 TRIM59Q8IWR1 403 aa10.88□□□□□ -0.67
COL8A1-206ENST00000474648 GSTCDQ8NEC7 633 aa10.88□□□□□ -0.67
COL8A1-206ENST00000474648 TMC2Q8TDI7 906 aa10.88□□□□□ -0.67
COL8A1-206ENST00000474648 PARD3BQ8TEW8 1205 aa10.88□□□□□ -0.67
COL8A1-206ENST00000474648 LPPQ93052 612 aa10.88□□□□□ -0.67
COL8A1-206ENST00000474648 CNOT6LQ96LI5 555 aaKnown RBP10.88□□□□□ -0.67
COL8A1-206ENST00000474648 POP1Q99575 1024 aaKnown RBP10.88□□□□□ -0.67
COL8A1-206ENST00000474648 CCDC94Q9BW85 323 aaPredicted RBP10.88□□□□□ -0.67
COL8A1-206ENST00000474648 ELAC1Q9H777 363 aaKnown RBP10.88□□□□□ -0.67
COL8A1-206ENST00000474648 RPF1Q9H9Y2 349 aaKnown RBP10.88□□□□□ -0.67
COL8A1-206ENST00000474648 PLEKHA5Q9HAU0 1116 aa10.88□□□□□ -0.67
COL8A1-206ENST00000474648 METTL14Q9HCE5 456 aaKnown RBP10.88□□□□□ -0.67
COL8A1-206ENST00000474648 PDE11AQ9HCR9 933 aa10.88□□□□□ -0.67
COL8A1-206ENST00000474648 RNF19AQ9NV58 838 aa10.88□□□□□ -0.67
COL8A1-206ENST00000474648 RBAKQ9NYW8 714 aaPredicted RBP10.88□□□□□ -0.67
COL8A1-206ENST00000474648 ARMCX3Q9UH62 379 aaPredicted RBP10.88□□□□□ -0.67
COL8A1-206ENST00000474648 LIMA1Q9UHB6 759 aaKnown RBP10.88□□□□□ -0.67
COL8A1-206ENST00000474648 NR2E3Q9Y5X4 410 aa10.88□□□□□ -0.67
COL8A1-206ENST00000474648 TET1Q8NFU7 2136 aa10.87□□□□□ -0.67
COL8A1-206ENST00000474648 GOLGA6L19H0YKK7 550 aa10.87□□□□□ -0.67
COL8A1-206ENST00000474648 AP5Z1O43299 807 aa10.87□□□□□ -0.67
COL8A1-206ENST00000474648 OFD1O75665 1012 aa10.87□□□□□ -0.67
COL8A1-206ENST00000474648 RECQL4O94761 1208 aa10.87□□□□□ -0.67
COL8A1-206ENST00000474648 FGBP02675 491 aa10.87□□□□□ -0.67
COL8A1-206ENST00000474648 EEF1GP26641 437 aaKnown RBP10.87□□□□□ -0.67
COL8A1-206ENST00000474648 VAMP7P51809 220 aa10.87□□□□□ -0.67
COL8A1-206ENST00000474648 AFF1P51825 1210 aaKnown RBP10.87□□□□□ -0.67
COL8A1-206ENST00000474648 CLDN10P78369 228 aa10.87□□□□□ -0.67
COL8A1-206ENST00000474648 KRT31Q15323 416 aa10.87□□□□□ -0.67
COL8A1-206ENST00000474648 ZBTB6Q15916 424 aa10.87□□□□□ -0.67
COL8A1-206ENST00000474648 CCDC40Q4G0X9 1142 aa10.87□□□□□ -0.67
COL8A1-206ENST00000474648 INTS8Q75QN2 995 aaKnown RBP10.87□□□□□ -0.67
COL8A1-206ENST00000474648 FAM114A1Q8IWE2 563 aa10.87□□□□□ -0.67
COL8A1-206ENST00000474648 ZNF516Q92618 1163 aa10.87□□□□□ -0.67
COL8A1-206ENST00000474648 SLC35C1Q96A29 364 aa10.87□□□□□ -0.67
COL8A1-206ENST00000474648 CCDC127Q96BQ5 260 aa10.87□□□□□ -0.67
COL8A1-206ENST00000474648 PGBD4Q96DM1 585 aa10.87□□□□□ -0.67
COL8A1-206ENST00000474648 SNX27Q96L92 541 aa10.87□□□□□ -0.67
COL8A1-206ENST00000474648 ZMAT2Q96NC0 199 aaKnown RBP10.87□□□□□ -0.67
COL8A1-206ENST00000474648 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.87□□□□□ -0.67
COL8A1-206ENST00000474648 APOL6Q9BWW8 343 aa10.87□□□□□ -0.67
COL8A1-206ENST00000474648 TMEM161AQ9NX61 479 aa10.87□□□□□ -0.67
COL8A1-206ENST00000474648 MIOSQ9NXC5 875 aa10.87□□□□□ -0.67
COL8A1-206ENST00000474648 KLK14Q9P0G3 267 aa10.87□□□□□ -0.67
COL8A1-206ENST00000474648 PARP2Q9UGN5 583 aa10.87□□□□□ -0.67
COL8A1-206ENST00000474648 GIT1Q9Y2X7 761 aa10.87□□□□□ -0.67
COL8A1-206ENST00000474648 PTPRJQ12913 1337 aa10.86□□□□□ -0.67
COL8A1-206ENST00000474648 SMIM28A0A1B0GU29 152 aa10.86□□□□□ -0.67
COL8A1-206ENST00000474648 C2orf72A6NCS6 295 aa10.86□□□□□ -0.67
COL8A1-206ENST00000474648 LRRIQ3A6PVS8 624 aaPredicted RBP10.86□□□□□ -0.67
COL8A1-206ENST00000474648 INPPL1O15357 1258 aa10.86□□□□□ -0.67
COL8A1-206ENST00000474648 BAIAP3O94812 1187 aa10.86□□□□□ -0.67
COL8A1-206ENST00000474648 KCNE1P15382 129 aa10.86□□□□□ -0.67
COL8A1-206ENST00000474648 CDK11BP21127 795 aaKnown RBP10.86□□□□□ -0.67
COL8A1-206ENST00000474648 SPAG1Q07617 926 aa10.86□□□□□ -0.67
COL8A1-206ENST00000474648 PPP3CAQ08209 521 aa10.86□□□□□ -0.67
COL8A1-206ENST00000474648 BFSP1Q12934 665 aa10.86□□□□□ -0.67
COL8A1-206ENST00000474648 HSP90AA2PQ14568 343 aaPredicted RBP10.86□□□□□ -0.67
COL8A1-206ENST00000474648 UVSSAQ2YD98 709 aa10.86□□□□□ -0.67
COL8A1-206ENST00000474648 MIIPQ5JXC2 388 aa10.86□□□□□ -0.67
COL8A1-206ENST00000474648 CLLU1OSQ5K130 101 aa10.86□□□□□ -0.67
COL8A1-206ENST00000474648 SCARA3Q6AZY7 606 aa10.86□□□□□ -0.67
COL8A1-206ENST00000474648 OTOP2Q7RTS6 562 aa10.86□□□□□ -0.67
COL8A1-206ENST00000474648 CREBRFQ8IUR6 639 aa10.86□□□□□ -0.67
COL8A1-206ENST00000474648 CD302Q8IX05 232 aa10.86□□□□□ -0.67
COL8A1-206ENST00000474648 EFCAB13Q8IY85 973 aa10.86□□□□□ -0.67
COL8A1-206ENST00000474648 RNF169Q8NCN4 708 aa10.86□□□□□ -0.67
COL8A1-206ENST00000474648 HERVK_113Q902F9 699 aa10.86□□□□□ -0.67
COL8A1-206ENST00000474648 TOP1MTQ969P6 601 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms