RNA–Protein interactions for RNA: ENST00000474309.1

EXOSC1-207, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 260 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-207ENST00000474309 CDCA2Q69YH5 1023 aaPredicted RBP12.74□□□□□ -0.37
EXOSC1-207ENST00000474309 DGLUCYQ7Z3D6 616 aa12.74□□□□□ -0.37
EXOSC1-207ENST00000474309 CDR2LQ86X02 465 aaPredicted RBP12.74□□□□□ -0.37
EXOSC1-207ENST00000474309 CEP57Q86XR8 500 aa12.74□□□□□ -0.37
EXOSC1-207ENST00000474309 ZBTB8OSQ8IWT0 167 aa12.74□□□□□ -0.37
EXOSC1-207ENST00000474309 MAML2Q8IZL2 1156 aaPredicted RBP12.74□□□□□ -0.37
EXOSC1-207ENST00000474309 PIGOQ8TEQ8 1089 aa12.74□□□□□ -0.37
EXOSC1-207ENST00000474309 RABGGTAQ92696 567 aa12.74□□□□□ -0.37
EXOSC1-207ENST00000474309 FGF13Q92913 245 aa12.74□□□□□ -0.37
EXOSC1-207ENST00000474309 MTMR9Q96QG7 549 aa12.74□□□□□ -0.37
EXOSC1-207ENST00000474309 BCO2Q9BYV7 579 aa12.74□□□□□ -0.37
EXOSC1-207ENST00000474309 C2orf40Q9H1Z8 148 aa12.74□□□□□ -0.37
EXOSC1-207ENST00000474309 DLL3Q9NYJ7 618 aa12.74□□□□□ -0.37
EXOSC1-207ENST00000474309 VWA8A3KMH1 1905 aa12.74□□□□□ -0.37
EXOSC1-207ENST00000474309 LRRIQ4A6NIV6 560 aa12.73□□□□□ -0.37
EXOSC1-207ENST00000474309 TMEM189-UBE2V1I3L0A0 370 aa12.73□□□□□ -0.37
EXOSC1-207ENST00000474309 ACKR2O00590 384 aa12.73□□□□□ -0.37
EXOSC1-207ENST00000474309 PTGESO14684 152 aa12.73□□□□□ -0.37
EXOSC1-207ENST00000474309 LAMTOR5O43504 91 aa12.73□□□□□ -0.37
EXOSC1-207ENST00000474309 KINO60870 393 aaKnown RBP12.73□□□□□ -0.37
EXOSC1-207ENST00000474309 SPATA31C1P0DKV0 1188 aa12.73□□□□□ -0.37
EXOSC1-207ENST00000474309 FDPSP14324 419 aaKnown RBP12.73□□□□□ -0.37
EXOSC1-207ENST00000474309 ATP2B1P20020 1258 aa12.73□□□□□ -0.37
EXOSC1-207ENST00000474309 TXKP42681 527 aa12.73□□□□□ -0.37
EXOSC1-207ENST00000474309 RBM25P49756 843 aaKnown RBP12.73□□□□□ -0.37
EXOSC1-207ENST00000474309 NTHL1P78549 312 aa12.73□□□□□ -0.37
EXOSC1-207ENST00000474309 SNW1Q13573 536 aaKnown RBP12.73□□□□□ -0.37
EXOSC1-207ENST00000474309 ANKRD1Q15327 319 aa12.73□□□□□ -0.37
EXOSC1-207ENST00000474309 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.73□□□□□ -0.37
EXOSC1-207ENST00000474309 GPR161Q8N6U8 529 aaKnown RBP12.73□□□□□ -0.37
EXOSC1-207ENST00000474309 NACC1Q96RE7 527 aa12.73□□□□□ -0.37
EXOSC1-207ENST00000474309 ADPGKQ9BRR6 497 aa12.73□□□□□ -0.37
EXOSC1-207ENST00000474309 FOXQ1Q9C009 403 aa12.73□□□□□ -0.37
EXOSC1-207ENST00000474309 TUFT1Q9NNX1 390 aa12.73□□□□□ -0.37
EXOSC1-207ENST00000474309 SNTG2Q9NY99 539 aa12.73□□□□□ -0.37
EXOSC1-207ENST00000474309 TPCN1Q9ULQ1 816 aa12.73□□□□□ -0.37
EXOSC1-207ENST00000474309 FAM205CA6NFA0 338 aa12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 CASTOR2A6NHX0 329 aa12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 POTEMA6NI47 508 aa12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 FAM170BA6NMN3 283 aa12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 SPTLC1O15269 473 aa12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 NCAM2O15394 837 aa12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 CCL16O15467 120 aa12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 NEMFO60524 1076 aa12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 USO1O60763 962 aaKnown RBP12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 KIF4AO95239 1232 aa12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 SDHBP21912 280 aa12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 FGFR3P22607 806 aa12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 OR1D2P34982 312 aa12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 PRPF4BQ13523 1007 aaKnown RBP12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 MAPK6Q16659 721 aa12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 ZBTB41Q5SVQ8 909 aa12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 AXDND1Q5T1B0 1012 aaPredicted RBP12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 CATSPER3Q86XQ3 398 aa12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 ITFG1Q8TB96 612 aa12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 HASPINQ8TF76 798 aa12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 CLDN23Q96B33 292 aa12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 POLR3CQ9BUI4 534 aaPredicted RBP12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 PDZD7Q9H5P4 517 aa12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 GPRC5CQ9NQ84 441 aa12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 AVENQ9NQS1 362 aaPredicted RBP12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 GDE1Q9NZC3 331 aa12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 DNMT3BQ9UBC3 853 aaKnown RBP12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 MTRRQ9UBK8 725 aa12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 CACNG4Q9UBN1 327 aa12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 PCDHGA2Q9Y5H1 932 aa12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 BACE2Q9Y5Z0 518 aa12.72□□□□□ -0.37
EXOSC1-207ENST00000474309 SPTBN2O15020 2390 aa12.71□□□□□ -0.37
EXOSC1-207ENST00000474309 CACNA1BQ00975 2339 aa12.71□□□□□ -0.37
EXOSC1-207ENST00000474309 A0A087WWV3 80 aa12.71□□□□□ -0.37
EXOSC1-207ENST00000474309 BTBD18B2RXH4 712 aa12.71□□□□□ -0.37
EXOSC1-207ENST00000474309 ADAM12O43184 909 aa12.71□□□□□ -0.37
EXOSC1-207ENST00000474309 TRAPPC3O43617 180 aa12.71□□□□□ -0.37
EXOSC1-207ENST00000474309 LRRN2O75325 713 aa12.71□□□□□ -0.37
EXOSC1-207ENST00000474309 ECI2O75521 394 aa12.71□□□□□ -0.37
EXOSC1-207ENST00000474309 RECQL4O94761 1208 aa12.71□□□□□ -0.37
EXOSC1-207ENST00000474309 CYP11B2P19099 503 aa12.71□□□□□ -0.37
EXOSC1-207ENST00000474309 MUTP22033 750 aa12.71□□□□□ -0.37
EXOSC1-207ENST00000474309 NAMPTP43490 491 aa12.71□□□□□ -0.37
EXOSC1-207ENST00000474309 RPS9P46781 194 aaKnown RBP12.71□□□□□ -0.37
EXOSC1-207ENST00000474309 PABPC1LQ4VXU2 614 aaKnown RBP12.71□□□□□ -0.37
EXOSC1-207ENST00000474309 VARS2Q5ST30 1063 aaKnown RBP12.71□□□□□ -0.37
EXOSC1-207ENST00000474309 ANKS3Q6ZW76 656 aa12.71□□□□□ -0.37
EXOSC1-207ENST00000474309 DCLK2Q8N568 766 aa12.71□□□□□ -0.37
EXOSC1-207ENST00000474309 ZBTB44Q8NCP5 570 aa12.71□□□□□ -0.37
EXOSC1-207ENST00000474309 SLC7A14Q8TBB6 771 aa12.71□□□□□ -0.37
EXOSC1-207ENST00000474309 NELL1Q92832 810 aa12.71□□□□□ -0.37
EXOSC1-207ENST00000474309 UROC1Q96N76 676 aa12.71□□□□□ -0.37
EXOSC1-207ENST00000474309 HINFPQ9BQA5 517 aa12.71□□□□□ -0.37
EXOSC1-207ENST00000474309 LTB4R2Q9NPC1 389 aa12.71□□□□□ -0.37
EXOSC1-207ENST00000474309 SPATA6Q9NWH7 488 aaPredicted RBP12.71□□□□□ -0.37
EXOSC1-207ENST00000474309 POLIQ9UNA4 740 aa12.71□□□□□ -0.37
EXOSC1-207ENST00000474309 MTF2Q9Y483 593 aaPredicted RBP12.71□□□□□ -0.37
EXOSC1-207ENST00000474309 MED19A0JLT2 244 aaPredicted RBP12.7□□□□□ -0.38
EXOSC1-207ENST00000474309 TTLL13PA6NNM8 815 aa12.7□□□□□ -0.38
EXOSC1-207ENST00000474309 B3GAT3O94766 335 aa12.7□□□□□ -0.38
EXOSC1-207ENST00000474309 PRKCBP05771 671 aa12.7□□□□□ -0.38
EXOSC1-207ENST00000474309 PTPN2P17706 415 aa12.7□□□□□ -0.38
EXOSC1-207ENST00000474309 RPA1P27694 616 aa12.7□□□□□ -0.38
EXOSC1-207ENST00000474309 EFNA5P52803 228 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms