RNA–Protein interactions for RNA: ENST00000474160.1

SYF2-203, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 2

Gene SYF2, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-203ENST00000474160 NAB2Q15742 525 aa20.68■□□□□ 0.9
SYF2-203ENST00000474160 L1TD1Q5T7N2 865 aaKnown RBP20.68■□□□□ 0.9
SYF2-203ENST00000474160 PLPP4Q5VZY2 271 aa20.68■□□□□ 0.9
SYF2-203ENST00000474160 RNF168Q8IYW5 571 aaPredicted RBP20.68■□□□□ 0.9
SYF2-203ENST00000474160 CEP120Q8N960 986 aa20.68■□□□□ 0.9
SYF2-203ENST00000474160 DDX27Q96GQ7 796 aaKnown RBP20.68■□□□□ 0.9
SYF2-203ENST00000474160 ZBTB45Q96K62 511 aaPredicted RBP20.68■□□□□ 0.9
SYF2-203ENST00000474160 PPP1R10Q96QC0 940 aaKnown RBP20.68■□□□□ 0.9
SYF2-203ENST00000474160 ACCSQ96QU6 501 aa20.68■□□□□ 0.9
SYF2-203ENST00000474160 HERC2P3Q9BVR0 1158 aa20.68■□□□□ 0.9
SYF2-203ENST00000474160 TMEM206Q9H813 350 aa20.68■□□□□ 0.9
SYF2-203ENST00000474160 FAM50BQ9Y247 325 aa20.68■□□□□ 0.9
SYF2-203ENST00000474160 PRG3Q9Y2Y8 225 aaPredicted RBP20.68■□□□□ 0.9
SYF2-203ENST00000474160 BRWD1Q9NSI6 2320 aa20.67■□□□□ 0.9
SYF2-203ENST00000474160 SMIM28A0A1B0GU29 152 aa20.67■□□□□ 0.9
SYF2-203ENST00000474160 TMEM189-UBE2V1I3L0A0 370 aa20.67■□□□□ 0.9
SYF2-203ENST00000474160 GCNT3O95395 438 aa20.67■□□□□ 0.9
SYF2-203ENST00000474160 PFKFB1P16118 471 aa20.67■□□□□ 0.9
SYF2-203ENST00000474160 ASIC1P78348 528 aa20.67■□□□□ 0.9
SYF2-203ENST00000474160 COASYQ13057 564 aa20.67■□□□□ 0.9
SYF2-203ENST00000474160 HSP90AA2PQ14568 343 aaPredicted RBP20.67■□□□□ 0.9
SYF2-203ENST00000474160 TMEM184AQ6ZMB5 413 aa20.67■□□□□ 0.9
SYF2-203ENST00000474160 UNC13DQ70J99 1090 aa20.67■□□□□ 0.9
SYF2-203ENST00000474160 CD302Q8IX05 232 aa20.67■□□□□ 0.9
SYF2-203ENST00000474160 CCDC34Q96HJ3 373 aa20.67■□□□□ 0.9
SYF2-203ENST00000474160 CLDND1Q9NY35 253 aa20.67■□□□□ 0.9
SYF2-203ENST00000474160 ADAM28Q9UKQ2 775 aa20.67■□□□□ 0.9
SYF2-203ENST00000474160 UNC80Q8N2C7 3258 aa20.67■□□□□ 0.9
SYF2-203ENST00000474160 C2orf71A6NGG8 1288 aa20.66■□□□□ 0.9
SYF2-203ENST00000474160 EIF3DO15371 548 aaKnown RBP eCLIP20.66■□□□□ 0.9
SYF2-203ENST00000474160 CXCL14O95715 111 aa20.66■□□□□ 0.9
SYF2-203ENST00000474160 C1RP00736 705 aa20.66■□□□□ 0.9
SYF2-203ENST00000474160 ANP32AP39687 249 aaKnown RBP20.66■□□□□ 0.9
SYF2-203ENST00000474160 SYKP43405 635 aa20.66■□□□□ 0.9
SYF2-203ENST00000474160 NRIP1P48552 1158 aa20.66■□□□□ 0.9
SYF2-203ENST00000474160 ZC2HC1CQ53FD0 456 aaPredicted RBP20.66■□□□□ 0.9
SYF2-203ENST00000474160 ADGRD2Q7Z7M1 963 aa20.66■□□□□ 0.9
SYF2-203ENST00000474160 PPFIBP1Q86W92 1011 aa20.66■□□□□ 0.9
SYF2-203ENST00000474160 BCL7CQ8WUZ0 217 aaPredicted RBP20.66■□□□□ 0.9
SYF2-203ENST00000474160 EMILIN2Q9BXX0 1053 aa20.66■□□□□ 0.9
SYF2-203ENST00000474160 MRPL17Q9NRX2 175 aaKnown RBP20.66■□□□□ 0.9
SYF2-203ENST00000474160 REV3LO60673 3130 aa20.65■□□□□ 0.9
SYF2-203ENST00000474160 CITO14578 2027 aa20.65■□□□□ 0.9
SYF2-203ENST00000474160 TCHHQ07283 1943 aa20.65■□□□□ 0.9
SYF2-203ENST00000474160 SF3B1O75533 1304 aaKnown RBP eCLIP20.65■□□□□ 0.9
SYF2-203ENST00000474160 UBE4BO95155 1302 aa20.65■□□□□ 0.9
SYF2-203ENST00000474160 KIAA0391O15091 583 aaKnown RBP20.65■□□□□ 0.9
SYF2-203ENST00000474160 XPOTO43592 962 aaKnown RBP20.65■□□□□ 0.9
SYF2-203ENST00000474160 ACTN4O43707 911 aaKnown RBP20.65■□□□□ 0.9
SYF2-203ENST00000474160 TADA2AO75478 443 aa20.65■□□□□ 0.9
SYF2-203ENST00000474160 URODP06132 367 aa20.65■□□□□ 0.9
SYF2-203ENST00000474160 ADRB2P07550 413 aa20.65■□□□□ 0.9
SYF2-203ENST00000474160 HARSP12081 509 aaKnown RBP20.65■□□□□ 0.9
SYF2-203ENST00000474160 KCNA5P22460 613 aa20.65■□□□□ 0.9
SYF2-203ENST00000474160 RPL9P32969 192 aaKnown RBP20.65■□□□□ 0.9
SYF2-203ENST00000474160 OSTNP61366 133 aa20.65■□□□□ 0.9
SYF2-203ENST00000474160 CREMQ03060 361 aa20.65■□□□□ 0.9
SYF2-203ENST00000474160 FUT10Q6P4F1 479 aa20.65■□□□□ 0.9
SYF2-203ENST00000474160 DCLRE1AQ6PJP8 1040 aa20.65■□□□□ 0.9
SYF2-203ENST00000474160 TMEM87AQ8NBN3 555 aa20.65■□□□□ 0.9
SYF2-203ENST00000474160 STAMQ92783 540 aa20.65■□□□□ 0.9
SYF2-203ENST00000474160 MSTO1Q9BUK6 570 aa20.65■□□□□ 0.9
SYF2-203ENST00000474160 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.65■□□□□ 0.9
SYF2-203ENST00000474160 A0A1B0GVL5 298 aa20.64■□□□□ 0.89
SYF2-203ENST00000474160 FAM189A1O60320 539 aa20.64■□□□□ 0.89
SYF2-203ENST00000474160 LDHAP00338 332 aaKnown RBP20.64■□□□□ 0.89
SYF2-203ENST00000474160 GARTP22102 1010 aa20.64■□□□□ 0.89
SYF2-203ENST00000474160 SNRPFP62306 86 aaKnown RBP20.64■□□□□ 0.89
SYF2-203ENST00000474160 PPP2R3AQ06190 1150 aa20.64■□□□□ 0.89
SYF2-203ENST00000474160 KCNC3Q14003 757 aa20.64■□□□□ 0.89
SYF2-203ENST00000474160 PTPN14Q15678 1187 aa20.64■□□□□ 0.89
SYF2-203ENST00000474160 SLC10A6Q3KNW5 377 aa20.64■□□□□ 0.89
SYF2-203ENST00000474160 USP41Q3LFD5 358 aa20.64■□□□□ 0.89
SYF2-203ENST00000474160 SLC39A4Q6P5W5 647 aa20.64■□□□□ 0.89
SYF2-203ENST00000474160 PDXDC1Q6P996 788 aa20.64■□□□□ 0.89
SYF2-203ENST00000474160 VN1R3Q9BXE9 311 aa20.64■□□□□ 0.89
SYF2-203ENST00000474160 HAPLN2Q9GZV7 340 aa20.64■□□□□ 0.89
SYF2-203ENST00000474160 IGFLR1Q9H665 355 aa20.64■□□□□ 0.89
SYF2-203ENST00000474160 RPF1Q9H9Y2 349 aaKnown RBP20.64■□□□□ 0.89
SYF2-203ENST00000474160 CHST7Q9NS84 486 aa20.64■□□□□ 0.89
SYF2-203ENST00000474160 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.63■□□□□ 0.89
SYF2-203ENST00000474160 TTC26A0AVF1 554 aa20.63■□□□□ 0.89
SYF2-203ENST00000474160 CASTOR2A6NHX0 329 aa20.63■□□□□ 0.89
SYF2-203ENST00000474160 HIDE1A8MVS5 230 aa20.63■□□□□ 0.89
SYF2-203ENST00000474160 TRAPPC3O43617 180 aa20.63■□□□□ 0.89
SYF2-203ENST00000474160 LILRB3O75022 631 aa20.63■□□□□ 0.89
SYF2-203ENST00000474160 CSPG5O95196 566 aa20.63■□□□□ 0.89
SYF2-203ENST00000474160 HOXB8P17481 243 aaPredicted RBP20.63■□□□□ 0.89
SYF2-203ENST00000474160 CYP3A5P20815 502 aa20.63■□□□□ 0.89
SYF2-203ENST00000474160 LTBRP36941 435 aa20.63■□□□□ 0.89
SYF2-203ENST00000474160 GLUD2P49448 558 aa20.63■□□□□ 0.89
SYF2-203ENST00000474160 NDUFV1P49821 464 aa20.63■□□□□ 0.89
SYF2-203ENST00000474160 DSG1Q02413 1049 aa20.63■□□□□ 0.89
SYF2-203ENST00000474160 TFF2Q03403 129 aa20.63■□□□□ 0.89
SYF2-203ENST00000474160 EHHADHQ08426 723 aa20.63■□□□□ 0.89
SYF2-203ENST00000474160 UPP1Q16831 310 aa20.63■□□□□ 0.89
SYF2-203ENST00000474160 FAM26FQ5R3K3 315 aa20.63■□□□□ 0.89
SYF2-203ENST00000474160 RBM23Q86U06 439 aaKnown RBP20.63■□□□□ 0.89
SYF2-203ENST00000474160 SYCP3Q8IZU3 236 aa20.63■□□□□ 0.89
SYF2-203ENST00000474160 CASP10Q92851 521 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms