RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 LIG4P49917 911 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 SEC13P55735 322 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 SNRPFP62306 86 aaKnown RBP8.29□□□□□ -1.08
CCDC93-207ENST00000474006 DHX9Q08211 1270 aaKnown RBP8.29□□□□□ -1.08
CCDC93-207ENST00000474006 NFX1Q12986 1120 aaKnown RBP8.29□□□□□ -1.08
CCDC93-207ENST00000474006 PAK1Q13153 545 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 ADAM9Q13443 819 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 MBTPS1Q14703 1052 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 ATF7IP2Q5U623 682 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 SLFN12LQ6IEE8 588 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 TTI2Q6NXR4 508 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 SLC39A4Q6P5W5 647 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 ZPBP2Q6X784 338 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 LRRC8DQ7L1W4 858 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 HS2ST1Q7LGA3 356 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 FAM228AQ86W67 206 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 CDR2LQ86X02 465 aaPredicted RBP8.29□□□□□ -1.08
CCDC93-207ENST00000474006 DHX40Q8IX18 779 aaKnown RBP8.29□□□□□ -1.08
CCDC93-207ENST00000474006 USP38Q8NB14 1042 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 GOLGA5Q8TBA6 731 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 EEF2KMTQ96G04 330 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 CPB2Q96IY4 423 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 PRIMPOLQ96LW4 560 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 TSG101Q99816 390 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 DUSP9Q99956 384 aaKnown RBP8.29□□□□□ -1.08
CCDC93-207ENST00000474006 BPIFA3Q9BQP9 254 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 TCHPQ9BT92 498 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 SRRTQ9BXP5 876 aaKnown RBP8.29□□□□□ -1.08
CCDC93-207ENST00000474006 PCIF1Q9H4Z3 704 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 CBX8Q9HC52 389 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 PTPRHQ9HD43 1115 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 PRDM5Q9NQX1 630 aaPredicted RBP8.29□□□□□ -1.08
CCDC93-207ENST00000474006 AGPAT3Q9NRZ7 376 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 TYW1Q9NV66 732 aaKnown RBP8.29□□□□□ -1.08
CCDC93-207ENST00000474006 CGNQ9P2M7 1197 aaKnown RBP8.29□□□□□ -1.08
CCDC93-207ENST00000474006 TRAF3IP3Q9Y228 551 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 TNFSF13BQ9Y275 285 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 STYXL1Q9Y6J8 313 aa8.29□□□□□ -1.08
CCDC93-207ENST00000474006 A0A0B4J269 797 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 SMTNL1A8MU46 457 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 HNRNPDLO14979 420 aaKnown RBP8.28□□□□□ -1.08
CCDC93-207ENST00000474006 CLDN3O15551 220 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 TOM1L1O75674 476 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 ERLIN2O94905 339 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 RAG1P15918 1043 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 PROZP22891 400 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 RPL13P26373 211 aaKnown RBP8.28□□□□□ -1.08
CCDC93-207ENST00000474006 GRM5P41594 1212 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 MATR3P43243 847 aaKnown RBP eCLIP8.28□□□□□ -1.08
CCDC93-207ENST00000474006 FKBP3Q00688 224 aaKnown RBP8.28□□□□□ -1.08
CCDC93-207ENST00000474006 LRRC63Q05C16 580 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 PAK2Q13177 524 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 MMRN1Q13201 1228 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 IQCB1Q15051 598 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 TPD52L1Q16890 204 aaPredicted RBP8.28□□□□□ -1.08
CCDC93-207ENST00000474006 EDRF1Q3B7T1 1238 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 ZCWPW2Q504Y3 356 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 TMCO4Q5TGY1 634 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 SPATA1Q5VX52 437 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 EEF1DP3Q658K8 133 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 PHLDB3Q6NSJ2 640 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 FOXR2Q6PJQ5 311 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 CSGALNACT2Q8N6G5 542 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 TPCN2Q8NHX9 752 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 TMEM174Q8WUU8 243 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 POMGNT1Q8WZA1 660 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 DPF3Q92784 378 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 SCLYQ96I15 445 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 CBWD1Q9BRT8 395 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 HAPLN2Q9GZV7 340 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 WNT8AQ9H1J5 351 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 TMX1Q9H3N1 280 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 ERVK-5Q9HDB9 667 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 CHST12Q9NRB3 414 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 FANCLQ9NW38 375 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 DMAC2Q9NW81 257 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 CNTNAP2Q9UHC6 1331 aa8.28□□□□□ -1.08
CCDC93-207ENST00000474006 ZMYM2Q9UBW7 1377 aa8.27□□□□□ -1.09
CCDC93-207ENST00000474006 GOLGA8IPA6NC78 632 aa8.27□□□□□ -1.09
CCDC93-207ENST00000474006 GOLGA8JA6NMD2 632 aa8.27□□□□□ -1.09
CCDC93-207ENST00000474006 BECN2A8MW95 431 aa8.27□□□□□ -1.09
CCDC93-207ENST00000474006 ENPP3O14638 875 aa8.27□□□□□ -1.09
CCDC93-207ENST00000474006 ABLIM1O14639 778 aa8.27□□□□□ -1.09
CCDC93-207ENST00000474006 IKBKBO14920 756 aa8.27□□□□□ -1.09
CCDC93-207ENST00000474006 N4BP3O15049 544 aa8.27□□□□□ -1.09
CCDC93-207ENST00000474006 CETN3O15182 167 aa8.27□□□□□ -1.09
CCDC93-207ENST00000474006 PARNO95453 639 aaKnown RBP8.27□□□□□ -1.09
CCDC93-207ENST00000474006 CXCL10P02778 98 aa8.27□□□□□ -1.09
CCDC93-207ENST00000474006 NR3C1P04150 777 aa8.27□□□□□ -1.09
CCDC93-207ENST00000474006 ZSCAN20P17040 1043 aaPredicted RBP8.27□□□□□ -1.09
CCDC93-207ENST00000474006 GARTP22102 1010 aa8.27□□□□□ -1.09
CCDC93-207ENST00000474006 FSHRP23945 695 aa8.27□□□□□ -1.09
CCDC93-207ENST00000474006 NR2F2P24468 414 aa8.27□□□□□ -1.09
CCDC93-207ENST00000474006 SLC19A1P41440 591 aa8.27□□□□□ -1.09
CCDC93-207ENST00000474006 CYP2J2P51589 502 aa8.27□□□□□ -1.09
CCDC93-207ENST00000474006 RAB15P59190 212 aa8.27□□□□□ -1.09
CCDC93-207ENST00000474006 MYL5Q02045 173 aa8.27□□□□□ -1.09
CCDC93-207ENST00000474006 MCL1Q07820 350 aa8.27□□□□□ -1.09
CCDC93-207ENST00000474006 MYBPC2Q14324 1141 aa8.27□□□□□ -1.09
CCDC93-207ENST00000474006 DSC3Q14574 896 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms