RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 SESTD1Q86VW0 696 aa16.01■□□□□ 0.15
LMNA-213ENST00000473598 CNGA4Q8IV77 575 aa16.01■□□□□ 0.15
LMNA-213ENST00000473598 ARRDC4Q8NCT1 418 aa16.01■□□□□ 0.15
LMNA-213ENST00000473598 LRRN4CLQ8ND94 238 aa16.01■□□□□ 0.15
LMNA-213ENST00000473598 SCLT1Q96NL6 688 aa16.01■□□□□ 0.15
LMNA-213ENST00000473598 NAA15Q9BXJ9 866 aaKnown RBP16.01■□□□□ 0.15
LMNA-213ENST00000473598 ARFGAP3Q9NP61 516 aa16.01■□□□□ 0.15
LMNA-213ENST00000473598 TNRC18O15417 2968 aaPredicted RBP16■□□□□ 0.15
LMNA-213ENST00000473598 CLDN3O15551 220 aa16■□□□□ 0.15
LMNA-213ENST00000473598 CABYRO75952 493 aa16■□□□□ 0.15
LMNA-213ENST00000473598 SEC31AO94979 1220 aaKnown RBP16■□□□□ 0.15
LMNA-213ENST00000473598 MATR3P43243 847 aaKnown RBP eCLIP16■□□□□ 0.15
LMNA-213ENST00000473598 FXR1P51114 621 aaKnown RBP eCLIP16■□□□□ 0.155e-7■■■■□ 19.8
LMNA-213ENST00000473598 VAMP7P51809 220 aa16■□□□□ 0.15
LMNA-213ENST00000473598 TMEM62Q0P6H9 643 aa16■□□□□ 0.15
LMNA-213ENST00000473598 KIZQ2M2Z5 673 aa16■□□□□ 0.15
LMNA-213ENST00000473598 DNAJC21Q5F1R6 531 aaKnown RBP16■□□□□ 0.15
LMNA-213ENST00000473598 GPR161Q8N6U8 529 aaKnown RBP16■□□□□ 0.15
LMNA-213ENST00000473598 CPLX3Q8WVH0 158 aa16■□□□□ 0.15
LMNA-213ENST00000473598 CCDC51Q96ER9 411 aa16■□□□□ 0.15
LMNA-213ENST00000473598 MFSD14AQ96MC6 490 aa16■□□□□ 0.15
LMNA-213ENST00000473598 PCMTD1Q96MG8 357 aaPredicted RBP16■□□□□ 0.15
LMNA-213ENST00000473598 FAM213AQ9BRX8 229 aa16■□□□□ 0.15
LMNA-213ENST00000473598 NUP58Q9BVL2 599 aa16■□□□□ 0.15
LMNA-213ENST00000473598 MOXD2PA6NHM9 499 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 DNM1LO00429 736 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 ABLIM1O14639 778 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 B4GALT5O43286 388 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 CSDE1O75534 798 aaKnown RBP15.99■□□□□ 0.15
LMNA-213ENST00000473598 FECHP22830 423 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 PROZP22891 400 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 ACLYP53396 1101 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 ETF1P62495 437 aaKnown RBP15.99■□□□□ 0.15
LMNA-213ENST00000473598 DLG4P78352 724 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 AMHR2Q16671 573 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 FAM47CQ5HY64 1035 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 FIGNQ5HY92 759 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 ATF7IP2Q5U623 682 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 GDF6Q6KF10 455 aaPredicted RBP15.99■□□□□ 0.15
LMNA-213ENST00000473598 TAF2Q6P1X5 1199 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 TOGARAM2Q6ZUX3 1019 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 NME8Q8N427 588 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 TSEN34Q9BSV6 310 aaKnown RBP15.99■□□□□ 0.15
LMNA-213ENST00000473598 MSTO1Q9BUK6 570 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 TTYH3Q9C0H2 523 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 PTPRHQ9HD43 1115 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 GRIN2DO15399 1336 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 ZNF233A6NK53 670 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 KBTBD13C9JR72 458 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 TRIM49P0CI25 452 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 TRIM49CP0CI26 452 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 TRIM21P19474 475 aaKnown RBP15.99■□□□□ 0.15
LMNA-213ENST00000473598 FMO5P49326 533 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 ENPEPQ07075 957 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 MCL1Q07820 350 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 C11orf91Q3C1V1 193 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 TRIM65Q6PJ69 517 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 UBE2Q1Q7Z7E8 422 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 PLEKHO2Q8TD55 490 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 IQCDQ96DY2 449 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 SGSM3Q96HU1 749 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 TCHPQ9BT92 498 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 FUT8Q9BYC5 575 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 GCOM2Q9BZD3 368 aaPredicted RBP15.99■□□□□ 0.15
LMNA-213ENST00000473598 MMRN2Q9H8L6 949 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 DNAI1Q9UI46 699 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 TNFSF13BQ9Y275 285 aa15.99■□□□□ 0.15
LMNA-213ENST00000473598 CNTNAP2Q9UHC6 1331 aa15.98■□□□□ 0.15
LMNA-213ENST00000473598 GTPBP10A4D1E9 387 aaKnown RBP15.98■□□□□ 0.15
LMNA-213ENST00000473598 GOLGA6L9A6NEM1 432 aa15.98■□□□□ 0.15
LMNA-213ENST00000473598 CYP24A1Q07973 514 aa15.98■□□□□ 0.15
LMNA-213ENST00000473598 C1orf220Q5T0J3 134 aa15.98■□□□□ 0.15
LMNA-213ENST00000473598 MPZL3Q6UWV2 235 aa15.98■□□□□ 0.15
LMNA-213ENST00000473598 CRELD2Q6UXH1 353 aaPredicted RBP15.98■□□□□ 0.15
LMNA-213ENST00000473598 RNF217Q8TC41 542 aa15.98■□□□□ 0.15
LMNA-213ENST00000473598 TMC2Q8TDI7 906 aa15.98■□□□□ 0.15
LMNA-213ENST00000473598 PARD3BQ8TEW8 1205 aa15.98■□□□□ 0.15
LMNA-213ENST00000473598 SENP6Q9GZR1 1112 aaPredicted RBP15.98■□□□□ 0.15
LMNA-213ENST00000473598 CDHR5Q9HBB8 845 aa15.98■□□□□ 0.15
LMNA-213ENST00000473598 CAPN11Q9UMQ6 739 aa15.98■□□□□ 0.15
LMNA-213ENST00000473598 ANK1P16157 1881 aa15.98■□□□□ 0.15
LMNA-213ENST00000473598 TTC26A0AVF1 554 aa15.97■□□□□ 0.15
LMNA-213ENST00000473598 SOWAHDA6NJG2 315 aa15.97■□□□□ 0.15
LMNA-213ENST00000473598 RNF225M0QZC1 329 aaPredicted RBP15.97■□□□□ 0.15
LMNA-213ENST00000473598 ACOT2P49753 483 aa15.97■□□□□ 0.15
LMNA-213ENST00000473598 ITGA7Q13683 1181 aa15.97■□□□□ 0.15
LMNA-213ENST00000473598 TMEM132AQ24JP5 1023 aa15.97■□□□□ 0.15
LMNA-213ENST00000473598 ZBTB33Q86T24 672 aa15.97■□□□□ 0.15
LMNA-213ENST00000473598 ANKLE1Q8NAG6 615 aa15.97■□□□□ 0.15
LMNA-213ENST00000473598 OSMRQ99650 979 aa15.97■□□□□ 0.15
LMNA-213ENST00000473598 CRACR2AQ9BSW2 395 aa15.97■□□□□ 0.15
LMNA-213ENST00000473598 FAM207AQ9NSI2 230 aaPredicted RBP15.97■□□□□ 0.15
LMNA-213ENST00000473598 GINS2Q9Y248 185 aa15.97■□□□□ 0.15
LMNA-213ENST00000473598 A0A1W2PQ45 241 aaPredicted RBP15.97■□□□□ 0.15
LMNA-213ENST00000473598 A0A1W2PQJ5 194 aa15.97■□□□□ 0.15
LMNA-213ENST00000473598 A0A1W2PQY0 241 aa15.97■□□□□ 0.15
LMNA-213ENST00000473598 FAM189A1O60320 539 aa15.97■□□□□ 0.15
LMNA-213ENST00000473598 TSPAN1O60635 241 aa15.97■□□□□ 0.15
LMNA-213ENST00000473598 ERLIN2O94905 339 aa15.97■□□□□ 0.15
LMNA-213ENST00000473598 COL6A1P12109 1028 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms