RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 CAP2P40123 477 aa22.6■■□□□ 1.21
COL18A1-207ENST00000473212 DYDC1Q8WWB3 177 aa22.6■■□□□ 1.21
COL18A1-207ENST00000473212 TCP11Q8WWU5 503 aa22.6■■□□□ 1.21
COL18A1-207ENST00000473212 ATG4AQ8WYN0 398 aa22.6■■□□□ 1.21
COL18A1-207ENST00000473212 VTI1AQ96AJ9 217 aa22.6■■□□□ 1.21
COL18A1-207ENST00000473212 NSRP1Q9H0G5 558 aaKnown RBP22.6■■□□□ 1.21
COL18A1-207ENST00000473212 TMEM206Q9H813 350 aa22.6■■□□□ 1.21
COL18A1-207ENST00000473212 ASTN2O75129 1339 aaPredicted RBP22.59■■□□□ 1.21
COL18A1-207ENST00000473212 P4HA2O15460 535 aa22.59■■□□□ 1.21
COL18A1-207ENST00000473212 CREB1P16220 341 aa22.59■■□□□ 1.21
COL18A1-207ENST00000473212 TRIP13Q15645 432 aaPredicted RBP22.59■■□□□ 1.21
COL18A1-207ENST00000473212 FAM102BQ5T8I3 360 aa22.59■■□□□ 1.21
COL18A1-207ENST00000473212 MFSD5Q6N075 450 aa22.59■■□□□ 1.21
COL18A1-207ENST00000473212 TBC1D1Q86TI0 1168 aaPredicted RBP22.59■■□□□ 1.21
COL18A1-207ENST00000473212 RPAINQ86UA6 219 aa22.59■■□□□ 1.21
COL18A1-207ENST00000473212 CLEC4DQ8WXI8 215 aa22.59■■□□□ 1.21
COL18A1-207ENST00000473212 PWWP2AQ96N64 755 aa22.59■■□□□ 1.21
COL18A1-207ENST00000473212 NOD2Q9HC29 1040 aa22.59■■□□□ 1.21
COL18A1-207ENST00000473212 AGO4Q9HCK5 861 aaKnown RBP22.59■■□□□ 1.21
COL18A1-207ENST00000473212 TP73O15350 636 aa22.59■■□□□ 1.21
COL18A1-207ENST00000473212 RWDD2BP57060 319 aa22.59■■□□□ 1.21
COL18A1-207ENST00000473212 SNRNP35Q16560 246 aaKnown RBP22.59■■□□□ 1.21
COL18A1-207ENST00000473212 C7orf43Q8WVR3 580 aa22.59■■□□□ 1.21
COL18A1-207ENST00000473212 FAM118BQ9BPY3 351 aa22.59■■□□□ 1.21
COL18A1-207ENST00000473212 EHMT1Q9H9B1 1298 aa22.59■■□□□ 1.21
COL18A1-207ENST00000473212 AAASQ9NRG9 546 aa22.59■■□□□ 1.21
COL18A1-207ENST00000473212 AGAP1Q9UPQ3 857 aa22.59■■□□□ 1.21
COL18A1-207ENST00000473212 CYP1A2P05177 515 aa22.58■■□□□ 1.21
COL18A1-207ENST00000473212 CLTAP09496 248 aa22.58■■□□□ 1.21
COL18A1-207ENST00000473212 EZRP15311 586 aaKnown RBP22.58■■□□□ 1.21
COL18A1-207ENST00000473212 CYP11B1P15538 503 aa22.58■■□□□ 1.21
COL18A1-207ENST00000473212 QARSP47897 775 aaKnown RBP22.58■■□□□ 1.21
COL18A1-207ENST00000473212 HSD17B4P51659 736 aa22.58■■□□□ 1.21
COL18A1-207ENST00000473212 TBC1D31Q96DN5 1066 aa22.58■■□□□ 1.21
COL18A1-207ENST00000473212 TAAR1Q96RJ0 339 aa22.58■■□□□ 1.21
COL18A1-207ENST00000473212 TACO1Q9BSH4 297 aaKnown RBP22.58■■□□□ 1.21
COL18A1-207ENST00000473212 RAVER2Q9HCJ3 691 aaKnown RBP22.58■■□□□ 1.21
COL18A1-207ENST00000473212 TMOD2Q9NZR1 351 aa22.58■■□□□ 1.21
COL18A1-207ENST00000473212 SNX3O60493 162 aa22.58■■□□□ 1.2
COL18A1-207ENST00000473212 MYCLP12524 364 aaPredicted RBP22.58■■□□□ 1.2
COL18A1-207ENST00000473212 SLC8A1P32418 973 aa22.58■■□□□ 1.2
COL18A1-207ENST00000473212 SSTR3P32745 418 aaPredicted RBP22.58■■□□□ 1.2
COL18A1-207ENST00000473212 GTF2BQ00403 316 aa22.58■■□□□ 1.2
COL18A1-207ENST00000473212 TRMT10CQ7L0Y3 403 aaKnown RBP22.58■■□□□ 1.2
COL18A1-207ENST00000473212 PNMA8AQ86V59 439 aaPredicted RBP22.58■■□□□ 1.2
COL18A1-207ENST00000473212 HELQQ8TDG4 1101 aa22.58■■□□□ 1.2
COL18A1-207ENST00000473212 BSNDQ8WZ55 320 aa22.58■■□□□ 1.2
COL18A1-207ENST00000473212 ARHGEF2Q92974 986 aaKnown RBP22.58■■□□□ 1.2
COL18A1-207ENST00000473212 ROPN1BQ9BZX4 212 aaPredicted RBP22.58■■□□□ 1.2
COL18A1-207ENST00000473212 ROPN1Q9HAT0 212 aaPredicted RBP22.58■■□□□ 1.2
COL18A1-207ENST00000473212 MLXIPLQ9NP71 852 aa22.58■■□□□ 1.2
COL18A1-207ENST00000473212 HOMER3Q9NSC5 361 aa22.58■■□□□ 1.2
COL18A1-207ENST00000473212 TCP11X1B4DZS4 312 aa22.57■■□□□ 1.2
COL18A1-207ENST00000473212 CCNE2O96020 404 aa22.57■■□□□ 1.2
COL18A1-207ENST00000473212 CHKAP35790 457 aa22.57■■□□□ 1.2
COL18A1-207ENST00000473212 PDE6CP51160 858 aa22.57■■□□□ 1.2
COL18A1-207ENST00000473212 KRT17Q04695 432 aa22.57■■□□□ 1.2
COL18A1-207ENST00000473212 ZNF568Q3ZCX4 644 aa22.57■■□□□ 1.2
COL18A1-207ENST00000473212 LMBRD2Q68DH5 695 aaPredicted RBP22.57■■□□□ 1.2
COL18A1-207ENST00000473212 C12orf50Q8NA57 414 aaPredicted RBP22.57■■□□□ 1.2
COL18A1-207ENST00000473212 SHC3Q92529 594 aa22.57■■□□□ 1.2
COL18A1-207ENST00000473212 N4BP2L2Q92802 583 aaPredicted RBP22.57■■□□□ 1.2
COL18A1-207ENST00000473212 LRRC19Q9H756 370 aa22.57■■□□□ 1.2
COL18A1-207ENST00000473212 FGFR1OP2Q9NVK5 253 aa22.57■■□□□ 1.2
COL18A1-207ENST00000473212 O00370 1275 aa22.57■■□□□ 1.2
COL18A1-207ENST00000473212 ELF1P32519 619 aa22.57■■□□□ 1.2
COL18A1-207ENST00000473212 FAM151AQ8WW52 585 aa22.57■■□□□ 1.2
COL18A1-207ENST00000473212 ZNF341Q9BYN7 854 aa22.57■■□□□ 1.2
COL18A1-207ENST00000473212 CHST7Q9NS84 486 aa22.57■■□□□ 1.2
COL18A1-207ENST00000473212 CTNNAL1Q9UBT7 734 aa22.57■■□□□ 1.2
COL18A1-207ENST00000473212 TMEM120BA0PK00 339 aa22.56■■□□□ 1.2
COL18A1-207ENST00000473212 SORBS3O60504 671 aa22.56■■□□□ 1.2
COL18A1-207ENST00000473212 UBOX5O94941 541 aa22.56■■□□□ 1.2
COL18A1-207ENST00000473212 MTMR1Q13613 665 aa22.56■■□□□ 1.2
COL18A1-207ENST00000473212 SGO2Q562F6 1265 aa22.56■■□□□ 1.2
COL18A1-207ENST00000473212 SLC39A4Q6P5W5 647 aa22.56■■□□□ 1.2
COL18A1-207ENST00000473212 ASIC3Q9UHC3 531 aa22.56■■□□□ 1.2
COL18A1-207ENST00000473212 GTF3C4Q9UKN8 822 aa22.56■■□□□ 1.2
COL18A1-207ENST00000473212 PTGER2P43116 358 aa22.56■■□□□ 1.2
COL18A1-207ENST00000473212 TRAF1Q13077 416 aa22.56■■□□□ 1.2
COL18A1-207ENST00000473212 DLGAP5Q15398 846 aa22.56■■□□□ 1.2
COL18A1-207ENST00000473212 XKR9Q5GH70 373 aa22.56■■□□□ 1.2
COL18A1-207ENST00000473212 PSPC1Q8WXF1 523 aaKnown RBP22.56■■□□□ 1.2
COL18A1-207ENST00000473212 GRIN3BO60391 1043 aa22.55■■□□□ 1.2
COL18A1-207ENST00000473212 APBA3O96018 575 aa22.55■■□□□ 1.2
COL18A1-207ENST00000473212 VPS41P49754 854 aa22.55■■□□□ 1.2
COL18A1-207ENST00000473212 ANKRD42Q8N9B4 389 aa22.55■■□□□ 1.2
COL18A1-207ENST00000473212 PARD3BQ8TEW8 1205 aa22.55■■□□□ 1.2
COL18A1-207ENST00000473212 DDX1Q92499 740 aaKnown RBP22.55■■□□□ 1.2
COL18A1-207ENST00000473212 USP15Q9Y4E8 981 aaPredicted RBP22.55■■□□□ 1.2
COL18A1-207ENST00000473212 OAS1P00973 400 aaKnown RBP22.55■■□□□ 1.2
COL18A1-207ENST00000473212 ICAM1P05362 532 aa22.55■■□□□ 1.2
COL18A1-207ENST00000473212 CNGA1P29973 690 aa22.55■■□□□ 1.2
COL18A1-207ENST00000473212 MFAP3P55082 362 aa22.55■■□□□ 1.2
COL18A1-207ENST00000473212 VSTM1Q6UX27 236 aa22.55■■□□□ 1.2
COL18A1-207ENST00000473212 C12orf56Q8IXR9 622 aa22.55■■□□□ 1.2
COL18A1-207ENST00000473212 KCNK9Q9NPC2 374 aa22.55■■□□□ 1.2
COL18A1-207ENST00000473212 WHRNQ9P202 907 aa22.55■■□□□ 1.2
COL18A1-207ENST00000473212 UVRAGQ9P2Y5 699 aa22.55■■□□□ 1.2
COL18A1-207ENST00000473212 FEM1BQ9UK73 627 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms