RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 CEP120Q8N960 986 aa17.07■□□□□ 0.32
MRPL55-226ENST00000473066 HASPINQ8TF76 798 aa17.07■□□□□ 0.32
MRPL55-226ENST00000473066 RABGGTAQ92696 567 aa17.07■□□□□ 0.32
MRPL55-226ENST00000473066 RIPOR3Q96MK2 946 aa17.07■□□□□ 0.32
MRPL55-226ENST00000473066 UROC1Q96N76 676 aa17.07■□□□□ 0.32
MRPL55-226ENST00000473066 NECTIN4Q96NY8 510 aa17.07■□□□□ 0.32
MRPL55-226ENST00000473066 ACAP3Q96P50 834 aa17.07■□□□□ 0.32
MRPL55-226ENST00000473066 SFXN1Q9H9B4 322 aa17.07■□□□□ 0.32
MRPL55-226ENST00000473066 CD320Q9NPF0 282 aa17.07■□□□□ 0.32
MRPL55-226ENST00000473066 SLC38A7Q9NVC3 462 aa17.07■□□□□ 0.32
MRPL55-226ENST00000473066 DPP7Q9UHL4 492 aa17.07■□□□□ 0.32
MRPL55-226ENST00000473066 DENND4AQ7Z401 1863 aa17.07■□□□□ 0.32
MRPL55-226ENST00000473066 C19orf67A6NJJ6 358 aa17.06■□□□□ 0.32
MRPL55-226ENST00000473066 F8W810 466 aa17.06■□□□□ 0.32
MRPL55-226ENST00000473066 CLDN3O15551 220 aa17.06■□□□□ 0.32
MRPL55-226ENST00000473066 TRAK2O60296 914 aa17.06■□□□□ 0.32
MRPL55-226ENST00000473066 KIF4AO95239 1232 aa17.06■□□□□ 0.32
MRPL55-226ENST00000473066 ZSCAN22P10073 491 aaPredicted RBP17.06■□□□□ 0.32
MRPL55-226ENST00000473066 ALADP13716 330 aa17.06■□□□□ 0.32
MRPL55-226ENST00000473066 PROZP22891 400 aa17.06■□□□□ 0.32
MRPL55-226ENST00000473066 DDIT3P35638 169 aa17.06■□□□□ 0.32
MRPL55-226ENST00000473066 MTHFRP42898 656 aa17.06■□□□□ 0.32
MRPL55-226ENST00000473066 DSG1Q02413 1049 aa17.06■□□□□ 0.32
MRPL55-226ENST00000473066 RARS2Q5T160 578 aaKnown RBP17.06■□□□□ 0.32
MRPL55-226ENST00000473066 USP49Q70CQ1 688 aa17.06■□□□□ 0.32
MRPL55-226ENST00000473066 SV2BQ7L1I2 683 aa17.06■□□□□ 0.32
MRPL55-226ENST00000473066 RNF168Q8IYW5 571 aaPredicted RBP17.06■□□□□ 0.32
MRPL55-226ENST00000473066 SPRYD3Q8NCJ5 442 aa17.06■□□□□ 0.32
MRPL55-226ENST00000473066 LRRC15Q8TF66 581 aa17.06■□□□□ 0.32
MRPL55-226ENST00000473066 RIN2Q8WYP3 895 aaPredicted RBP17.06■□□□□ 0.32
MRPL55-226ENST00000473066 SUSD6Q92537 303 aa17.06■□□□□ 0.32
MRPL55-226ENST00000473066 SNX27Q96L92 541 aa17.06■□□□□ 0.32
MRPL55-226ENST00000473066 FBXL18Q96ME1 805 aa17.06■□□□□ 0.32
MRPL55-226ENST00000473066 PTPRHQ9HD43 1115 aa17.06■□□□□ 0.32
MRPL55-226ENST00000473066 CACNG4Q9UBN1 327 aa17.06■□□□□ 0.32
MRPL55-226ENST00000473066 BDP1A6H8Y1 2624 aa17.06■□□□□ 0.32
MRPL55-226ENST00000473066 SPTLC2O15270 562 aa17.05■□□□□ 0.32
MRPL55-226ENST00000473066 YEATS4O95619 227 aa17.05■□□□□ 0.32
MRPL55-226ENST00000473066 BRD1O95696 1058 aa17.05■□□□□ 0.32
MRPL55-226ENST00000473066 GLUD1P00367 558 aa17.05■□□□□ 0.32
MRPL55-226ENST00000473066 F13A1P00488 732 aa17.05■□□□□ 0.32
MRPL55-226ENST00000473066 ZNF131P52739 623 aa17.05■□□□□ 0.32
MRPL55-226ENST00000473066 DYMQ7RTS9 669 aa17.05■□□□□ 0.32
MRPL55-226ENST00000473066 SLC22A17Q8WUG5 538 aa17.05■□□□□ 0.32
MRPL55-226ENST00000473066 RPGRIP1Q96KN7 1286 aa17.05■□□□□ 0.32
MRPL55-226ENST00000473066 PPP1R10Q96QC0 940 aaKnown RBP17.05■□□□□ 0.32
MRPL55-226ENST00000473066 PAAF1Q9BRP4 392 aa17.05■□□□□ 0.32
MRPL55-226ENST00000473066 GPR62Q9BZJ7 368 aa17.05■□□□□ 0.32
MRPL55-226ENST00000473066 DCXO43602 365 aa17.04■□□□□ 0.32
MRPL55-226ENST00000473066 PPP6R2O75170 966 aa17.04■□□□□ 0.32
MRPL55-226ENST00000473066 CLCN4P51793 760 aa17.04■□□□□ 0.32
MRPL55-226ENST00000473066 KYAT1Q16773 422 aa17.04■□□□□ 0.32
MRPL55-226ENST00000473066 FAM171A1Q5VUB5 890 aa17.04■□□□□ 0.32
MRPL55-226ENST00000473066 KIAA0319Q5VV43 1072 aa17.04■□□□□ 0.32
MRPL55-226ENST00000473066 PDXDC1Q6P996 788 aa17.04■□□□□ 0.32
MRPL55-226ENST00000473066 TAS1R1Q7RTX1 841 aa17.04■□□□□ 0.32
MRPL55-226ENST00000473066 CEP57Q86XR8 500 aa17.04■□□□□ 0.32
MRPL55-226ENST00000473066 GPR65Q8IYL9 337 aa17.04■□□□□ 0.32
MRPL55-226ENST00000473066 LINC00301Q8NCQ3 95 aa17.04■□□□□ 0.32
MRPL55-226ENST00000473066 ZBTB45Q96K62 511 aaPredicted RBP17.04■□□□□ 0.32
MRPL55-226ENST00000473066 B3GALT6Q96L58 329 aa17.04■□□□□ 0.32
MRPL55-226ENST00000473066 TTPALQ9BTX7 342 aa17.04■□□□□ 0.32
MRPL55-226ENST00000473066 S1PR5Q9H228 398 aa17.04■□□□□ 0.32
MRPL55-226ENST00000473066 ADAM7Q9H2U9 754 aa17.04■□□□□ 0.32
MRPL55-226ENST00000473066 TFIP11Q9UBB9 837 aaKnown RBP17.04■□□□□ 0.32
MRPL55-226ENST00000473066 TBX20Q9UMR3 447 aa17.04■□□□□ 0.32
MRPL55-226ENST00000473066 NR2E1Q9Y466 385 aa17.04■□□□□ 0.32
MRPL55-226ENST00000473066 ANK1P16157 1881 aa17.03■□□□□ 0.32
MRPL55-226ENST00000473066 SMIM28A0A1B0GU29 152 aa17.03■□□□□ 0.32
MRPL55-226ENST00000473066 TMEM189-UBE2V1I3L0A0 370 aa17.03■□□□□ 0.32
MRPL55-226ENST00000473066 ABLIM1O14639 778 aa17.03■□□□□ 0.32
MRPL55-226ENST00000473066 TEX28O15482 410 aa17.03■□□□□ 0.32
MRPL55-226ENST00000473066 TRAPPC3O43617 180 aa17.03■□□□□ 0.32
MRPL55-226ENST00000473066 LILRB3O75022 631 aa17.03■□□□□ 0.32
MRPL55-226ENST00000473066 B3GAT3O94766 335 aa17.03■□□□□ 0.32
MRPL55-226ENST00000473066 GAP43P17677 238 aa17.03■□□□□ 0.32
MRPL55-226ENST00000473066 MCL1Q07820 350 aa17.03■□□□□ 0.32
MRPL55-226ENST00000473066 NAB2Q15742 525 aa17.03■□□□□ 0.32
MRPL55-226ENST00000473066 FOXD4L6Q3SYB3 417 aaPredicted RBP17.03■□□□□ 0.32
MRPL55-226ENST00000473066 ATAT1Q5SQI0 421 aa17.03■□□□□ 0.32
MRPL55-226ENST00000473066 FOXD4L3Q6VB84 417 aaPredicted RBP17.03■□□□□ 0.32
MRPL55-226ENST00000473066 GLYCTKQ8IVS8 523 aa17.03■□□□□ 0.32
MRPL55-226ENST00000473066 C12orf76Q8N812 135 aaPredicted RBP17.03■□□□□ 0.32
MRPL55-226ENST00000473066 KCNN1Q92952 543 aa17.03■□□□□ 0.32
MRPL55-226ENST00000473066 DDX27Q96GQ7 796 aaKnown RBP17.03■□□□□ 0.32
MRPL55-226ENST00000473066 CXCL16Q9H2A7 254 aa17.03■□□□□ 0.32
MRPL55-226ENST00000473066 EPHX3Q9H6B9 360 aa17.03■□□□□ 0.32
MRPL55-226ENST00000473066 RXFP1Q9HBX9 757 aa17.03■□□□□ 0.32
MRPL55-226ENST00000473066 MAN1C1Q9NR34 630 aa17.03■□□□□ 0.32
MRPL55-226ENST00000473066 TSHZ2Q9NRE2 1034 aa17.03■□□□□ 0.32
MRPL55-226ENST00000473066 CHST7Q9NS84 486 aa17.03■□□□□ 0.32
MRPL55-226ENST00000473066 FNIP2Q9P278 1114 aa17.03■□□□□ 0.32
MRPL55-226ENST00000473066 SEL1LQ9UBV2 794 aa17.03■□□□□ 0.32
MRPL55-226ENST00000473066 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.03■□□□□ 0.32
MRPL55-226ENST00000473066 LOC730098B7Z3J9 87 aa17.02■□□□□ 0.32
MRPL55-226ENST00000473066 PI4K2BG5E9Z4 385 aa17.02■□□□□ 0.32
MRPL55-226ENST00000473066 CUTAO60888 179 aa17.02■□□□□ 0.32
MRPL55-226ENST00000473066 EFEMP2O95967 443 aa17.02■□□□□ 0.32
MRPL55-226ENST00000473066 PIGRP01833 764 aa17.02■□□□□ 0.32
MRPL55-226ENST00000473066 CLTAP09496 248 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms