RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, human

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLCC1-208	ENST00000473062	ALOX15	P16050	662 aa	Predicted RBP	4.36	□□□□□ -1.71
CLCC1-208	ENST00000473062	ATF3	P18847	181 aa		4.36	□□□□□ -1.71
CLCC1-208	ENST00000473062	MAN2A2	P49641	1150 aa		4.36	□□□□□ -1.71
CLCC1-208	ENST00000473062	CLRN1	P58418	232 aa		4.36	□□□□□ -1.71
CLCC1-208	ENST00000473062	GNAI1	P63096	354 aa		4.36	□□□□□ -1.71
CLCC1-208	ENST00000473062	MLC1	Q15049	377 aa		4.36	□□□□□ -1.71
CLCC1-208	ENST00000473062	ATAT1	Q5SQI0	421 aa		4.36	□□□□□ -1.71
CLCC1-208	ENST00000473062	PPP4R4	Q6NUP7	873 aa		4.36	□□□□□ -1.71
CLCC1-208	ENST00000473062	LILRA6	Q6PI73	481 aa		4.36	□□□□□ -1.71
CLCC1-208	ENST00000473062		Q6ZVL8	140 aa		4.36	□□□□□ -1.71
CLCC1-208	ENST00000473062	LIMS2	Q7Z4I7	341 aa		4.36	□□□□□ -1.71
CLCC1-208	ENST00000473062	DENND1C	Q8IV53	801 aa		4.36	□□□□□ -1.71
CLCC1-208	ENST00000473062	WDR75	Q8IWA0	830 aa	Known RBP	4.36	□□□□□ -1.71
CLCC1-208	ENST00000473062	GRAMD1C	Q8IYS0	662 aa		4.36	□□□□□ -1.71
CLCC1-208	ENST00000473062	PRR18	Q8N4B5	295 aa		4.36	□□□□□ -1.71
CLCC1-208	ENST00000473062	CCHCR1	Q8TD31	782 aa		4.36	□□□□□ -1.71
CLCC1-208	ENST00000473062	NSUN6	Q8TEA1	469 aa	Known RBP	4.36	□□□□□ -1.71
CLCC1-208	ENST00000473062	TFAP2C	Q92754	450 aa		4.36	□□□□□ -1.71
CLCC1-208	ENST00000473062	DVL3	Q92997	716 aa	Predicted RBP	4.36	□□□□□ -1.71
CLCC1-208	ENST00000473062	HPS3	Q969F9	1004 aa		4.36	□□□□□ -1.71
CLCC1-208	ENST00000473062	TMX3	Q96JJ7	454 aa		4.36	□□□□□ -1.71
CLCC1-208	ENST00000473062	DCLRE1C	Q96SD1	692 aa	Known RBP	4.36	□□□□□ -1.71
CLCC1-208	ENST00000473062	RBM15	Q96T37	977 aa	Known RBP eCLIP	4.36	□□□□□ -1.71	2e-12	■■□□□ 13.4
CLCC1-208	ENST00000473062	SIK2	Q9H0K1	926 aa		4.36	□□□□□ -1.71
CLCC1-208	ENST00000473062	C11orf54	Q9H0W9	315 aa	Predicted RBP	4.36	□□□□□ -1.71
CLCC1-208	ENST00000473062	SIDT1	Q9NXL6	827 aa	Known RBP	4.36	□□□□□ -1.71
CLCC1-208	ENST00000473062	CHPF2	Q9P2E5	772 aa		4.36	□□□□□ -1.71
CLCC1-208	ENST00000473062	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.36	□□□□□ -1.71
CLCC1-208	ENST00000473062	PAXBP1	Q9Y5B6	917 aa		4.36	□□□□□ -1.71
CLCC1-208	ENST00000473062	TBKBP1	A7MCY6	615 aa		4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	FAM227A	F5H4B4	570 aa		4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062		H3BML4	177 aa		4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	MUSK	O15146	869 aa		4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	FOXS1	O43638	330 aa		4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	AP1G1	O43747	822 aa		4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	POMC	P01189	267 aa		4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	FTL	P02792	175 aa	Predicted RBP	4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	ANXA1	P04083	346 aa		4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	ACO1	P21399	889 aa	Known RBP	4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	FXR1	P51114	621 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	FOXL1	Q12952	345 aa		4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	MTM1	Q13496	603 aa		4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	SEPT2	Q15019	361 aa		4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	PABPC1L	Q4VXU2	614 aa	Known RBP	4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	DACT2	Q5SW24	774 aa		4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	NAIF1	Q69YI7	327 aa	Predicted RBP	4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	ARMC6	Q6NXE6	501 aa		4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	MAMDC4	Q6UXC1	1216 aa		4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	SEM1	Q6ZVN7	128 aa		4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	SRGAP1	Q7Z6B7	1085 aa		4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	ATXN2L	Q8WWM7	1075 aa	Known RBP	4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	DPF2	Q92785	391 aa		4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	TTC17	Q96AE7	1141 aa		4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	CLPTM1L	Q96KA5	538 aa		4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	MRI1	Q9BV20	369 aa		4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	PACSIN1	Q9BY11	444 aa		4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	AGO3	Q9H9G7	860 aa	Known RBP	4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	RLIM	Q9NVW2	624 aa		4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	POGK	Q9P215	609 aa		4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	LIMCH1	Q9UPQ0	1083 aa		4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	STXBP5L	Q9Y2K9	1186 aa		4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	TESMIN	Q9Y4I5	508 aa		4.35	□□□□□ -1.71
CLCC1-208	ENST00000473062	TRIM24	O15164	1050 aa		4.34	□□□□□ -1.71
CLCC1-208	ENST00000473062	FOXD2	O60548	495 aa	Predicted RBP	4.34	□□□□□ -1.71
CLCC1-208	ENST00000473062	CTNND1	O60716	968 aa	Known RBP	4.34	□□□□□ -1.71
CLCC1-208	ENST00000473062	HLA-DOA	P06340	250 aa		4.34	□□□□□ -1.71
CLCC1-208	ENST00000473062	LPO	P22079	712 aa	Predicted RBP	4.34	□□□□□ -1.71
CLCC1-208	ENST00000473062	ACRV1	P26436	265 aa		4.34	□□□□□ -1.71
CLCC1-208	ENST00000473062	HIBADH	P31937	336 aa	Known RBP	4.34	□□□□□ -1.71
CLCC1-208	ENST00000473062	BMT2	Q1RMZ1	405 aa		4.34	□□□□□ -1.71
CLCC1-208	ENST00000473062	ARHGAP29	Q52LW3	1261 aa		4.34	□□□□□ -1.71
CLCC1-208	ENST00000473062	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	4.34	□□□□□ -1.71
CLCC1-208	ENST00000473062	AFMID	Q63HM1	303 aa		4.34	□□□□□ -1.71
CLCC1-208	ENST00000473062	DAAM2	Q86T65	1068 aa		4.34	□□□□□ -1.71
CLCC1-208	ENST00000473062	PLXDC1	Q8IUK5	500 aa		4.34	□□□□□ -1.71
CLCC1-208	ENST00000473062	LILRA3	Q8N6C8	439 aa	Predicted RBP	4.34	□□□□□ -1.71
CLCC1-208	ENST00000473062	OR52N2	Q8NGI0	321 aa		4.34	□□□□□ -1.71
CLCC1-208	ENST00000473062	SLC35G2	Q8TBE7	412 aa		4.34	□□□□□ -1.71
CLCC1-208	ENST00000473062		Q8TCH9	128 aa		4.34	□□□□□ -1.71
CLCC1-208	ENST00000473062	DIS3L	Q8TF46	1054 aa	Known RBP	4.34	□□□□□ -1.71
CLCC1-208	ENST00000473062	DDX17	Q92841	729 aa	Known RBP	4.34	□□□□□ -1.71
CLCC1-208	ENST00000473062	ADO	Q96SZ5	270 aa		4.34	□□□□□ -1.71
CLCC1-208	ENST00000473062	SSBP3	Q9BWW4	388 aa	Predicted RBP	4.34	□□□□□ -1.71
CLCC1-208	ENST00000473062	GPR87	Q9BY21	358 aa		4.34	□□□□□ -1.71
CLCC1-208	ENST00000473062	GTPBP4	Q9BZE4	634 aa	Known RBP	4.34	□□□□□ -1.71
CLCC1-208	ENST00000473062	KLC2	Q9H0B6	622 aa		4.34	□□□□□ -1.71
CLCC1-208	ENST00000473062	SPON1	Q9HCB6	807 aa		4.34	□□□□□ -1.71
CLCC1-208	ENST00000473062	PARPBP	Q9NWS1	579 aa		4.34	□□□□□ -1.71
CLCC1-208	ENST00000473062	CFAP97	Q9P2B7	532 aa		4.34	□□□□□ -1.71
CLCC1-208	ENST00000473062	SH3BP1	Q9Y3L3	701 aa		4.34	□□□□□ -1.71
CLCC1-208	ENST00000473062	ADAMTS20	P59510	1910 aa		4.34	□□□□□ -1.71
CLCC1-208	ENST00000473062	KRTAP23-1	A1A580	65 aa		4.33	□□□□□ -1.72
CLCC1-208	ENST00000473062	CXorf49	A8MYA2	514 aa	Predicted RBP	4.33	□□□□□ -1.72
CLCC1-208	ENST00000473062	HAUS5	O94927	633 aa		4.33	□□□□□ -1.72
CLCC1-208	ENST00000473062	PARN	O95453	639 aa	Known RBP	4.33	□□□□□ -1.72
CLCC1-208	ENST00000473062	GNAI2	P04899	355 aa		4.33	□□□□□ -1.72
CLCC1-208	ENST00000473062	MAGEA10	P43363	369 aa	Predicted RBP	4.33	□□□□□ -1.72
CLCC1-208	ENST00000473062	SLC6A9	P48067	706 aa		4.33	□□□□□ -1.72
CLCC1-208	ENST00000473062	HK3	P52790	923 aa		4.33	□□□□□ -1.72
CLCC1-208	ENST00000473062	CACNB3	P54284	484 aa		4.33	□□□□□ -1.72

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