RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 FAM89AQ96GI7 184 aa7.37□□□□□ -1.23
CLK1-209ENST00000472679 MRGPRX4Q96LA9 322 aa7.37□□□□□ -1.23
CLK1-209ENST00000472679 MRI1Q9BV20 369 aa7.37□□□□□ -1.23
CLK1-209ENST00000472679 CFAP20Q9Y6A4 193 aaKnown RBP7.37□□□□□ -1.23
CLK1-209ENST00000472679 BTBD11A6QL63 1104 aa7.36□□□□□ -1.23
CLK1-209ENST00000472679 TBKBP1A7MCY6 615 aa7.36□□□□□ -1.23
CLK1-209ENST00000472679 B5MCH6 92 aa7.36□□□□□ -1.23
CLK1-209ENST00000472679 SGTAO43765 313 aa7.36□□□□□ -1.23
CLK1-209ENST00000472679 PTTG1IPP53801 180 aa7.36□□□□□ -1.23
CLK1-209ENST00000472679 ZNF280AP59817 542 aaPredicted RBP7.36□□□□□ -1.23
CLK1-209ENST00000472679 CDSNQ15517 529 aa7.36□□□□□ -1.23
CLK1-209ENST00000472679 BMT2Q1RMZ1 405 aa7.36□□□□□ -1.23
CLK1-209ENST00000472679 ATAT1Q5SQI0 421 aa7.36□□□□□ -1.23
CLK1-209ENST00000472679 B3GNT9Q6UX72 402 aa7.36□□□□□ -1.23
CLK1-209ENST00000472679 PALM2Q8IXS6 379 aa7.36□□□□□ -1.23
CLK1-209ENST00000472679 DRC7Q8IY82 874 aa7.36□□□□□ -1.23
CLK1-209ENST00000472679 GRAMD1CQ8IYS0 662 aa7.36□□□□□ -1.23
CLK1-209ENST00000472679 DCBLD1Q8N8Z6 715 aa7.36□□□□□ -1.23
CLK1-209ENST00000472679 RNF169Q8NCN4 708 aa7.36□□□□□ -1.23
CLK1-209ENST00000472679 MVB12AQ96EY5 273 aa7.36□□□□□ -1.23
CLK1-209ENST00000472679 AIFM3Q96NN9 605 aa7.36□□□□□ -1.23
CLK1-209ENST00000472679 MOCS1Q9NZB8 636 aa7.36□□□□□ -1.23
CLK1-209ENST00000472679 HDAC5Q9UQL6 1122 aa7.36□□□□□ -1.23
CLK1-209ENST00000472679 KLRG2A4D1S0 409 aaPredicted RBP7.35□□□□□ -1.23
CLK1-209ENST00000472679 OFD1O75665 1012 aa7.35□□□□□ -1.23
CLK1-209ENST00000472679 IPO13O94829 963 aaKnown RBP7.35□□□□□ -1.23
CLK1-209ENST00000472679 ZNF20P17024 532 aa7.35□□□□□ -1.23
CLK1-209ENST00000472679 ADAM17P78536 824 aa7.35□□□□□ -1.23
CLK1-209ENST00000472679 PGS1Q32NB8 556 aa7.35□□□□□ -1.23
CLK1-209ENST00000472679 PPP4R3AQ6IN85 833 aa7.35□□□□□ -1.23
CLK1-209ENST00000472679 GSPT2Q8IYD1 628 aaKnown RBP7.35□□□□□ -1.23
CLK1-209ENST00000472679 TCEAL8Q8IYN2 117 aa7.35□□□□□ -1.23
CLK1-209ENST00000472679 CLIP3Q96DZ5 547 aa7.35□□□□□ -1.23
CLK1-209ENST00000472679 SPON1Q9HCB6 807 aa7.35□□□□□ -1.23
CLK1-209ENST00000472679 PLSCR1O15162 318 aa7.34□□□□□ -1.23
CLK1-209ENST00000472679 PJA2O43164 708 aa7.34□□□□□ -1.23
CLK1-209ENST00000472679 DTNBO60941 627 aa7.34□□□□□ -1.23
CLK1-209ENST00000472679 CLRN1P58418 232 aa7.34□□□□□ -1.23
CLK1-209ENST00000472679 CTXN1P60606 82 aa7.34□□□□□ -1.23
CLK1-209ENST00000472679 RAP2BP61225 183 aa7.34□□□□□ -1.23
CLK1-209ENST00000472679 PTH1RQ03431 593 aa7.34□□□□□ -1.23
CLK1-209ENST00000472679 GTF2H3Q13889 308 aa7.34□□□□□ -1.23
CLK1-209ENST00000472679 MLC1Q15049 377 aa7.34□□□□□ -1.23
CLK1-209ENST00000472679 KHDC1Q4VXA5 237 aaKnown RBP7.34□□□□□ -1.23
CLK1-209ENST00000472679 NXNQ6DKJ4 435 aa7.34□□□□□ -1.23
CLK1-209ENST00000472679 OTUD7BQ6GQQ9 843 aa7.34□□□□□ -1.23
CLK1-209ENST00000472679 CXorf57Q6NSI4 855 aaKnown RBP7.34□□□□□ -1.23
CLK1-209ENST00000472679 C14orf80Q86SX3 495 aa7.34□□□□□ -1.23
CLK1-209ENST00000472679 TTC7BQ86TV6 843 aa7.34□□□□□ -1.23
CLK1-209ENST00000472679 MAGEB6Q8N7X4 407 aa7.34□□□□□ -1.23
CLK1-209ENST00000472679 SLC35G2Q8TBE7 412 aa7.34□□□□□ -1.23
CLK1-209ENST00000472679 TFAP2CQ92754 450 aa7.34□□□□□ -1.23
CLK1-209ENST00000472679 DVL3Q92997 716 aaPredicted RBP7.34□□□□□ -1.23
CLK1-209ENST00000472679 MAP3K14Q99558 947 aa7.34□□□□□ -1.23
CLK1-209ENST00000472679 MNTQ99583 582 aa7.34□□□□□ -1.23
CLK1-209ENST00000472679 VRK1Q99986 396 aaPredicted RBP7.34□□□□□ -1.23
CLK1-209ENST00000472679 CHPF2Q9P2E5 772 aa7.34□□□□□ -1.23
CLK1-209ENST00000472679 PRR5-ARHGAP8B1AHC4 643 aa7.33□□□□□ -1.24
CLK1-209ENST00000472679 MUSKO15146 869 aa7.33□□□□□ -1.24
CLK1-209ENST00000472679 MYBP10242 640 aa7.33□□□□□ -1.24
CLK1-209ENST00000472679 HSPA6P17066 643 aa7.33□□□□□ -1.24
CLK1-209ENST00000472679 ATP5JP18859 108 aa7.33□□□□□ -1.24
CLK1-209ENST00000472679 TLE1Q04724 770 aa7.33□□□□□ -1.24
CLK1-209ENST00000472679 RRP1BQ14684 758 aaKnown RBP7.33□□□□□ -1.24
CLK1-209ENST00000472679 PRKD1Q15139 912 aaPredicted RBP7.33□□□□□ -1.24
CLK1-209ENST00000472679 VPS72Q15906 364 aa7.33□□□□□ -1.24
CLK1-209ENST00000472679 ZNF529Q6P280 563 aa7.33□□□□□ -1.24
CLK1-209ENST00000472679 PLXDC1Q8IUK5 500 aa7.33□□□□□ -1.24
CLK1-209ENST00000472679 SYT12Q8IV01 421 aa7.33□□□□□ -1.24
CLK1-209ENST00000472679 MYO1HQ8N1T3 1032 aa7.33□□□□□ -1.24
CLK1-209ENST00000472679 DIS3LQ8TF46 1054 aaKnown RBP7.33□□□□□ -1.24
CLK1-209ENST00000472679 TAAR9Q96RI9 348 aa7.33□□□□□ -1.24
CLK1-209ENST00000472679 C1QTNF3Q9BXJ4 246 aa7.33□□□□□ -1.24
CLK1-209ENST00000472679 GPR87Q9BY21 358 aa7.33□□□□□ -1.24
CLK1-209ENST00000472679 NMRK2Q9NPI5 230 aa7.33□□□□□ -1.24
CLK1-209ENST00000472679 TCRBV7S2A1N4TA0A589 114 aa7.32□□□□□ -1.24
CLK1-209ENST00000472679 ALDH2P05091 517 aa7.32□□□□□ -1.24
CLK1-209ENST00000472679 SNRPA1P09661 255 aaKnown RBP7.32□□□□□ -1.24
CLK1-209ENST00000472679 SBK3P0C264 359 aa7.32□□□□□ -1.24
CLK1-209ENST00000472679 MAN2A2P49641 1150 aa7.32□□□□□ -1.24
CLK1-209ENST00000472679 MAP2K6P52564 334 aa7.32□□□□□ -1.24
CLK1-209ENST00000472679 SNAPC2Q13487 334 aa7.32□□□□□ -1.24
CLK1-209ENST00000472679 RAB39AQ14964 217 aa7.32□□□□□ -1.24
CLK1-209ENST00000472679 SPATS1Q496A3 300 aa7.32□□□□□ -1.24
CLK1-209ENST00000472679 DCAF17Q5H9S7 520 aaPredicted RBP7.32□□□□□ -1.24
CLK1-209ENST00000472679 SPDYAQ5MJ70 313 aa7.32□□□□□ -1.24
CLK1-209ENST00000472679 EFCAB12Q6NXP0 572 aa7.32□□□□□ -1.24
CLK1-209ENST00000472679 GADL1Q6ZQY3 521 aa7.32□□□□□ -1.24
CLK1-209ENST00000472679 SEM1Q6ZVN7 128 aa7.32□□□□□ -1.24
CLK1-209ENST00000472679 HTR3DQ70Z44 454 aa7.32□□□□□ -1.24
CLK1-209ENST00000472679 UBE3BQ7Z3V4 1068 aa7.32□□□□□ -1.24
CLK1-209ENST00000472679 PRRT2Q7Z6L0 340 aaPredicted RBP7.32□□□□□ -1.24
CLK1-209ENST00000472679 WDR75Q8IWA0 830 aaKnown RBP7.32□□□□□ -1.24
CLK1-209ENST00000472679 PPP1R35Q8TAP8 253 aa7.32□□□□□ -1.24
CLK1-209ENST00000472679 FBXO34Q9NWN3 711 aa7.32□□□□□ -1.24
CLK1-209ENST00000472679 CALCOCO1Q9P1Z2 691 aa7.32□□□□□ -1.24
CLK1-209ENST00000472679 XDHP47989 1333 aa7.31□□□□□ -1.24
CLK1-209ENST00000472679 KRTAP23-1A1A580 65 aa7.31□□□□□ -1.24
CLK1-209ENST00000472679 LEFTY2O00292 366 aa7.31□□□□□ -1.24
CLK1-209ENST00000472679 CYP27B1O15528 508 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms