RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 COL4A3BPQ9Y5P4 624 aa10.09□□□□□ -0.79
SMC4-213ENST00000472282 EOMESO95936 686 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 SRGAP2CP0DJJ0 459 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 CYP11B2P19099 503 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 SFPQP23246 707 aaKnown RBP eCLIP10.08□□□□□ -0.8
SMC4-213ENST00000472282 STAT6P42226 847 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 AFF1P51825 1210 aaKnown RBP10.08□□□□□ -0.8
SMC4-213ENST00000472282 SLC12A3P55017 1021 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 LAMTOR4Q0VGL1 99 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 COASYQ13057 564 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 DHX8Q14562 1220 aaKnown RBP10.08□□□□□ -0.8
SMC4-213ENST00000472282 MCM6Q14566 821 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 UBXN11Q5T124 520 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 RRAGBQ5VZM2 374 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 RESP18Q5W5W9 173 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 ADALQ6DHV7 355 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 TWF2Q6IBS0 349 aaKnown RBP10.08□□□□□ -0.8
SMC4-213ENST00000472282 RINT1Q6NUQ1 792 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 CCDC73Q6ZRK6 1079 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 CATSPER4Q7RTX7 472 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 GPBP1Q86WP2 473 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 PARP9Q8IXQ6 854 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 ABI1Q8IZP0 508 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 SYT2Q8N9I0 419 aaPredicted RBP10.08□□□□□ -0.8
SMC4-213ENST00000472282 SMRP1Q8NCR6 262 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 MCPH1Q8NEM0 835 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 BCL7CQ8WUZ0 217 aaPredicted RBP10.08□□□□□ -0.8
SMC4-213ENST00000472282 TCP11Q8WWU5 503 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 PSPC1Q8WXF1 523 aaKnown RBP10.08□□□□□ -0.8
SMC4-213ENST00000472282 ZFP42Q96MM3 310 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 ZNF558Q96NG5 402 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 TCF25Q9BQ70 676 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 TRAIPQ9BWF2 469 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 POLD4Q9HCU8 107 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 CHST12Q9NRB3 414 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 AGPAT5Q9NUQ2 364 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 DACT1Q9NYF0 836 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 FAM13BQ9NYF5 915 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 PRKAG3Q9UGI9 489 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 CDH22Q9UJ99 828 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 BDP1A6H8Y1 2624 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 KMT2EQ8IZD2 1858 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 MYO10Q9HD67 2058 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 C5orf42Q9H799 3197 aa10.08□□□□□ -0.8
SMC4-213ENST00000472282 MTCL1Q9Y4B5 1905 aaKnown RBP10.07□□□□□ -0.8
SMC4-213ENST00000472282 CITO14578 2027 aa10.07□□□□□ -0.8
SMC4-213ENST00000472282 GPR37L1O60883 481 aa10.07□□□□□ -0.8
SMC4-213ENST00000472282 OFD1O75665 1012 aa10.07□□□□□ -0.8
SMC4-213ENST00000472282 HOXA11P31270 313 aaPredicted RBP10.07□□□□□ -0.8
SMC4-213ENST00000472282 BCAR1P56945 870 aa10.07□□□□□ -0.8
SMC4-213ENST00000472282 WDR4P57081 412 aaKnown RBP10.07□□□□□ -0.8
SMC4-213ENST00000472282 RAD51AP2Q09MP3 1159 aa10.07□□□□□ -0.8
SMC4-213ENST00000472282 TMEM31Q5JXX7 168 aa10.07□□□□□ -0.8
SMC4-213ENST00000472282 MRPL14Q6P1L8 145 aaKnown RBP10.07□□□□□ -0.8
SMC4-213ENST00000472282 AGMOQ6ZNB7 445 aa10.07□□□□□ -0.8
SMC4-213ENST00000472282 C1orf186Q6ZWK4 172 aa10.07□□□□□ -0.8
SMC4-213ENST00000472282 ZNF280BQ86YH2 543 aa10.07□□□□□ -0.8
SMC4-213ENST00000472282 FEZF2Q8TBJ5 459 aa10.07□□□□□ -0.8
SMC4-213ENST00000472282 ASAP3Q8TDY4 903 aa10.07□□□□□ -0.8
SMC4-213ENST00000472282 AUTS2Q8WXX7 1259 aa10.07□□□□□ -0.8
SMC4-213ENST00000472282 DHX58Q96C10 678 aa10.07□□□□□ -0.8
SMC4-213ENST00000472282 APOL5Q9BWW9 433 aa10.07□□□□□ -0.8
SMC4-213ENST00000472282 NRDE2Q9H7Z3 1164 aa10.07□□□□□ -0.8
SMC4-213ENST00000472282 ENTPD7Q9NQZ7 604 aa10.07□□□□□ -0.8
SMC4-213ENST00000472282 TBC1D13Q9NVG8 400 aa10.07□□□□□ -0.8
SMC4-213ENST00000472282 SPG21Q9NZD8 308 aa10.07□□□□□ -0.8
SMC4-213ENST00000472282 DNAJB4Q9UDY4 337 aa10.07□□□□□ -0.8
SMC4-213ENST00000472282 LZTS1Q9Y250 596 aa10.07□□□□□ -0.8
SMC4-213ENST00000472282 INPP5FQ9Y2H2 1132 aa10.07□□□□□ -0.8
SMC4-213ENST00000472282 USP15Q9Y4E8 981 aaPredicted RBP10.07□□□□□ -0.8
SMC4-213ENST00000472282 NPHP3-ACAD11A0A0J9YXS1 232 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 A0A1B0GVL5 298 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 A0A1W2PQ27 194 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 A0A1W2PQ64 194 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 A0A1W2PQD8 194 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 TRIM66O15016 1216 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 ZNF623O75123 536 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 HIP1RO75146 1068 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 ZC3H11AO75152 810 aaKnown RBP eCLIP10.06□□□□□ -0.84e-12■■■■■ 110
SMC4-213ENST00000472282 DDHD2O94830 711 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 PFKFB1P16118 471 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 GLRA2P23416 452 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 CMA1P23946 247 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 GUCY2CP25092 1073 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 ARL2P36404 184 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 CDC42EP1Q00587 391 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 MAPK7Q13164 816 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 CAPSQ13938 189 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 MXD4Q14582 209 aaPredicted RBP10.06□□□□□ -0.8
SMC4-213ENST00000472282 AGERQ15109 404 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 CSPP1Q1MSJ5 1256 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 LLGL2Q6P1M3 1020 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 SYCE2Q6PIF2 218 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 SRGAP1Q7Z6B7 1085 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 RNF135Q8IUD6 432 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 DAW1Q8N136 415 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 FSIP1Q8NA03 581 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 RNF149Q8NC42 400 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 SMG8Q8ND04 991 aaKnown RBP10.06□□□□□ -0.8
SMC4-213ENST00000472282 BSNDQ8WZ55 320 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms