RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 GHRP10912 638 aa5.07□□□□□ -1.6
LMNB1-205ENST00000472034 ALAS1P13196 640 aa5.07□□□□□ -1.6
LMNB1-205ENST00000472034 GLB1P16278 677 aa5.07□□□□□ -1.6
LMNB1-205ENST00000472034 IBSPP21815 317 aaPredicted RBP5.07□□□□□ -1.6
LMNB1-205ENST00000472034 HOXC13P31276 330 aa5.07□□□□□ -1.6
LMNB1-205ENST00000472034 ALDH5A1P51649 535 aaPredicted RBP5.07□□□□□ -1.6
LMNB1-205ENST00000472034 LIMK1P53667 647 aa5.07□□□□□ -1.6
LMNB1-205ENST00000472034 ITIH3Q06033 890 aa5.07□□□□□ -1.6
LMNB1-205ENST00000472034 ARHGAP1Q07960 439 aa5.07□□□□□ -1.6
LMNB1-205ENST00000472034 POU4F3Q15319 338 aa5.07□□□□□ -1.6
LMNB1-205ENST00000472034 ZNF423Q2M1K9 1284 aa5.07□□□□□ -1.6
LMNB1-205ENST00000472034 FOXD4L6Q3SYB3 417 aaPredicted RBP5.07□□□□□ -1.6
LMNB1-205ENST00000472034 HSP90B2PQ58FF3 399 aa5.07□□□□□ -1.6
LMNB1-205ENST00000472034 FDX2Q6P4F2 183 aa5.07□□□□□ -1.6
LMNB1-205ENST00000472034 FOXD4L3Q6VB84 417 aaPredicted RBP5.07□□□□□ -1.6
LMNB1-205ENST00000472034 NSMFQ6X4W1 530 aa5.07□□□□□ -1.6
LMNB1-205ENST00000472034 ZNF605Q86T29 641 aa5.07□□□□□ -1.6
LMNB1-205ENST00000472034 RTN4RL1Q86UN2 441 aaPredicted RBP5.07□□□□□ -1.6
LMNB1-205ENST00000472034 TMEFF1Q8IYR6 380 aa5.07□□□□□ -1.6
LMNB1-205ENST00000472034 CMTR2Q8IYT2 770 aaKnown RBP5.07□□□□□ -1.6
LMNB1-205ENST00000472034 LRRC47Q8N1G4 583 aaKnown RBP5.07□□□□□ -1.6
LMNB1-205ENST00000472034 ZNF843Q8N446 348 aa5.07□□□□□ -1.6
LMNB1-205ENST00000472034 CASP10Q92851 521 aa5.07□□□□□ -1.6
LMNB1-205ENST00000472034 TCF25Q9BQ70 676 aa5.07□□□□□ -1.6
LMNB1-205ENST00000472034 MYL10Q9BUA6 226 aa5.07□□□□□ -1.6
LMNB1-205ENST00000472034 RUSC1Q9BVN2 902 aa5.07□□□□□ -1.6
LMNB1-205ENST00000472034 MAF1Q9H063 256 aa5.07□□□□□ -1.6
LMNB1-205ENST00000472034 CYP4F12Q9HCS2 524 aa5.07□□□□□ -1.6
LMNB1-205ENST00000472034 TMEM260Q9NX78 707 aa5.07□□□□□ -1.6
LMNB1-205ENST00000472034 MCM9Q9NXL9 1143 aa5.07□□□□□ -1.6
LMNB1-205ENST00000472034 RAB23Q9ULC3 237 aa5.07□□□□□ -1.6
LMNB1-205ENST00000472034 DOCK8Q8NF50 2099 aa5.07□□□□□ -1.6
LMNB1-205ENST00000472034 NOTCH2Q04721 2471 aa5.07□□□□□ -1.6
LMNB1-205ENST00000472034 C2orf16Q68DN1 1984 aa5.07□□□□□ -1.6
LMNB1-205ENST00000472034 CACNA1EQ15878 2313 aa5.06□□□□□ -1.6
LMNB1-205ENST00000472034 FRMPD2Q68DX3 1309 aaPredicted RBP5.06□□□□□ -1.6
LMNB1-205ENST00000472034 SHROOM3Q8TF72 1996 aa5.06□□□□□ -1.6
LMNB1-205ENST00000472034 F5H6K3 240 aa5.06□□□□□ -1.6
LMNB1-205ENST00000472034 DDX3YO15523 660 aaKnown RBP5.06□□□□□ -1.6
LMNB1-205ENST00000472034 SMARCA5O60264 1052 aaPredicted RBP5.06□□□□□ -1.6
LMNB1-205ENST00000472034 USP17L7P0C7H9 530 aa5.06□□□□□ -1.6
LMNB1-205ENST00000472034 SRFP11831 508 aa5.06□□□□□ -1.6
LMNB1-205ENST00000472034 TDGF1P13385 188 aa5.06□□□□□ -1.6
LMNB1-205ENST00000472034 EPCAMP16422 314 aa5.06□□□□□ -1.6
LMNB1-205ENST00000472034 PBX3P40426 434 aa5.06□□□□□ -1.6
LMNB1-205ENST00000472034 DAB2P98082 770 aa5.06□□□□□ -1.6
LMNB1-205ENST00000472034 KLRC3Q07444 240 aa5.06□□□□□ -1.6
LMNB1-205ENST00000472034 SNW1Q13573 536 aaKnown RBP5.06□□□□□ -1.6
LMNB1-205ENST00000472034 BAATQ14032 418 aaPredicted RBP5.06□□□□□ -1.6
LMNB1-205ENST00000472034 UBXN2BQ14CS0 331 aa5.06□□□□□ -1.6
LMNB1-205ENST00000472034 LY6KQ17RY6 165 aa5.06□□□□□ -1.6
LMNB1-205ENST00000472034 EXOSC6Q5RKV6 272 aaKnown RBP5.06□□□□□ -1.6
LMNB1-205ENST00000472034 ATAT1Q5SQI0 421 aa5.06□□□□□ -1.6
LMNB1-205ENST00000472034 ANKRD34AQ69YU3 496 aa5.06□□□□□ -1.6
LMNB1-205ENST00000472034 TCEAL6Q6IPX3 200 aa5.06□□□□□ -1.6
LMNB1-205ENST00000472034 ZNF280DQ6N043 979 aa5.06□□□□□ -1.6
LMNB1-205ENST00000472034 CCDC62Q6P9F0 684 aa5.06□□□□□ -1.6
LMNB1-205ENST00000472034 SLC30A10Q6XR72 485 aa5.06□□□□□ -1.6
LMNB1-205ENST00000472034 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.06□□□□□ -1.6
LMNB1-205ENST00000472034 SDR42E1Q8WUS8 393 aa5.06□□□□□ -1.6
LMNB1-205ENST00000472034 TCEAL3Q969E4 200 aa5.06□□□□□ -1.6
LMNB1-205ENST00000472034 ACSF2Q96CM8 615 aaPredicted RBP5.06□□□□□ -1.6
LMNB1-205ENST00000472034 SPOCK3Q9BQ16 436 aa5.06□□□□□ -1.6
LMNB1-205ENST00000472034 RIOK1Q9BRS2 568 aaKnown RBP5.06□□□□□ -1.6
LMNB1-205ENST00000472034 EMILIN2Q9BXX0 1053 aa5.06□□□□□ -1.6
LMNB1-205ENST00000472034 ENTPD7Q9NQZ7 604 aa5.06□□□□□ -1.6
LMNB1-205ENST00000472034 PRMT8Q9NR22 394 aaPredicted RBP5.06□□□□□ -1.6
LMNB1-205ENST00000472034 RAD18Q9NS91 495 aa5.06□□□□□ -1.6
LMNB1-205ENST00000472034 FRMD4BQ9Y2L6 1034 aa5.06□□□□□ -1.6
LMNB1-205ENST00000472034 MRVI1Q9Y6F6 885 aa5.06□□□□□ -1.6
LMNB1-205ENST00000472034 PTPRQQ9UMZ3 2332 aa5.06□□□□□ -1.6
LMNB1-205ENST00000472034 GREB1Q4ZG55 1949 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 C2CD3Q4AC94 2353 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 KANSL1LA0AUZ9 987 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 MEGF11A6BM72 1044 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 FAM170BA6NMN3 283 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 NFIBO00712 420 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 NKRFO15226 690 aaKnown RBP eCLIP5.05□□□□□ -1.6
LMNB1-205ENST00000472034 KIF1CO43896 1103 aaKnown RBP5.05□□□□□ -1.6
LMNB1-205ENST00000472034 ZNF500O60304 480 aaPredicted RBP5.05□□□□□ -1.6
LMNB1-205ENST00000472034 IDH1O75874 414 aaKnown RBP5.05□□□□□ -1.6
LMNB1-205ENST00000472034 F2P00734 622 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 CHRNA1P02708 482 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 TCF3P15923 654 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 CD151P48509 253 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 OAZ1P54368 228 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 STARD6P59095 220 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 UBE3AQ05086 875 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 MTAPQ13126 283 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 SIM2Q14190 667 aaPredicted RBP5.05□□□□□ -1.6
LMNB1-205ENST00000472034 LPIN1Q14693 890 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 PTPN14Q15678 1187 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 ZRSR2Q15696 482 aaKnown RBP5.05□□□□□ -1.6
LMNB1-205ENST00000472034 SPOUT1Q5T280 376 aaKnown RBP5.05□□□□□ -1.6
LMNB1-205ENST00000472034 CCDC149Q6ZUS6 474 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 RASGRP2Q7LDG7 609 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 OTOP3Q7RTS5 596 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.05□□□□□ -1.6
LMNB1-205ENST00000472034 THNSL1Q8IYQ7 743 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 ZNF513Q8N8E2 541 aaPredicted RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms