RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 KMT2EQ8IZD2 1858 aa24.78■■□□□ 1.56
C9orf3-213ENST00000471978 PHLPP2Q6ZVD8 1323 aa24.78■■□□□ 1.56
C9orf3-213ENST00000471978 GLRA4Q5JXX5 417 aa24.77■■□□□ 1.56
C9orf3-213ENST00000471978 C1orf186Q6ZWK4 172 aa24.77■■□□□ 1.56
C9orf3-213ENST00000471978 STAMQ92783 540 aa24.77■■□□□ 1.56
C9orf3-213ENST00000471978 ZNF707Q96C28 371 aaPredicted RBP24.77■■□□□ 1.56
C9orf3-213ENST00000471978 ACO2Q99798 780 aaKnown RBP24.77■■□□□ 1.56
C9orf3-213ENST00000471978 NT5C3AQ9H0P0 336 aa24.77■■□□□ 1.56
C9orf3-213ENST00000471978 TMEM134Q9H6X4 195 aa24.77■■□□□ 1.56
C9orf3-213ENST00000471978 PIDD1Q9HB75 910 aa24.77■■□□□ 1.56
C9orf3-213ENST00000471978 ZDHHC7Q9NXF8 308 aa24.77■■□□□ 1.56
C9orf3-213ENST00000471978 CLUHO75153 1309 aa24.77■■□□□ 1.56
C9orf3-213ENST00000471978 N4BP1O75113 896 aaKnown RBP24.76■■□□□ 1.55
C9orf3-213ENST00000471978 MRE11P49959 708 aa24.76■■□□□ 1.55
C9orf3-213ENST00000471978 ELAVL2Q12926 359 aaKnown RBP24.76■■□□□ 1.55
C9orf3-213ENST00000471978 MAPK7Q13164 816 aa24.76■■□□□ 1.55
C9orf3-213ENST00000471978 PSMD5Q16401 504 aa24.76■■□□□ 1.55
C9orf3-213ENST00000471978 LNX1Q8TBB1 728 aaPredicted RBP24.76■■□□□ 1.55
C9orf3-213ENST00000471978 PIK3R5Q8WYR1 880 aa24.76■■□□□ 1.55
C9orf3-213ENST00000471978 PPP1R10Q96QC0 940 aaKnown RBP24.76■■□□□ 1.55
C9orf3-213ENST00000471978 MRPL4Q9BYD3 311 aaKnown RBP24.76■■□□□ 1.55
C9orf3-213ENST00000471978 KCNK12Q9HB15 430 aa24.76■■□□□ 1.55
C9orf3-213ENST00000471978 ARHGAP28Q9P2N2 729 aa24.76■■□□□ 1.55
C9orf3-213ENST00000471978 RBM19Q9Y4C8 960 aaKnown RBP24.76■■□□□ 1.55
C9orf3-213ENST00000471978 VWA3AA6NCI4 1184 aa24.75■■□□□ 1.55
C9orf3-213ENST00000471978 PAPLNO95428 1278 aa24.75■■□□□ 1.55
C9orf3-213ENST00000471978 GBP2P32456 591 aaPredicted RBP24.75■■□□□ 1.55
C9orf3-213ENST00000471978 MCM2P49736 904 aa24.75■■□□□ 1.55
C9orf3-213ENST00000471978 TCF15Q12870 199 aa24.75■■□□□ 1.55
C9orf3-213ENST00000471978 TDGQ13569 410 aa24.75■■□□□ 1.55
C9orf3-213ENST00000471978 ZNF568Q3ZCX4 644 aa24.75■■□□□ 1.55
C9orf3-213ENST00000471978 TAS1R3Q7RTX0 852 aa24.75■■□□□ 1.55
C9orf3-213ENST00000471978 CLSTN3Q9BQT9 956 aa24.75■■□□□ 1.55
C9orf3-213ENST00000471978 TIPINQ9BVW5 301 aa24.75■■□□□ 1.55
C9orf3-213ENST00000471978 CCDC94Q9BW85 323 aaPredicted RBP24.75■■□□□ 1.55
C9orf3-213ENST00000471978 PRKD2Q9BZL6 878 aa24.75■■□□□ 1.55
C9orf3-213ENST00000471978 CDT1Q9H211 546 aa24.75■■□□□ 1.55
C9orf3-213ENST00000471978 C17orf75Q9HAS0 396 aa24.75■■□□□ 1.55
C9orf3-213ENST00000471978 PTPRHQ9HD43 1115 aa24.75■■□□□ 1.55
C9orf3-213ENST00000471978 SFI1A8K8P3 1242 aa24.74■■□□□ 1.55
C9orf3-213ENST00000471978 GUCY2CP25092 1073 aa24.74■■□□□ 1.55
C9orf3-213ENST00000471978 GRM5P41594 1212 aa24.74■■□□□ 1.55
C9orf3-213ENST00000471978 YARSP54577 528 aaKnown RBP24.74■■□□□ 1.55
C9orf3-213ENST00000471978 OSTNP61366 133 aa24.74■■□□□ 1.55
C9orf3-213ENST00000471978 HYIQ5T013 277 aa24.74■■□□□ 1.55
C9orf3-213ENST00000471978 PDXDC1Q6P996 788 aa24.74■■□□□ 1.55
C9orf3-213ENST00000471978 DCLRE1AQ6PJP8 1040 aa24.74■■□□□ 1.55
C9orf3-213ENST00000471978 CEP120Q8N960 986 aa24.74■■□□□ 1.55
C9orf3-213ENST00000471978 PNMA5Q96PV4 448 aa24.74■■□□□ 1.55
C9orf3-213ENST00000471978 PLIN2Q99541 437 aa24.74■■□□□ 1.55
C9orf3-213ENST00000471978 TARS2Q9BW92 718 aaKnown RBP24.74■■□□□ 1.55
C9orf3-213ENST00000471978 TOPORSQ9NS56 1045 aaPredicted RBP24.74■■□□□ 1.55
C9orf3-213ENST00000471978 IGSF9Q9P2J2 1179 aa24.74■■□□□ 1.55
C9orf3-213ENST00000471978 SMC3Q9UQE7 1217 aa24.74■■□□□ 1.55
C9orf3-213ENST00000471978 MTCL1Q9Y4B5 1905 aaKnown RBP24.74■■□□□ 1.55
C9orf3-213ENST00000471978 SMIM28A0A1B0GU29 152 aa24.73■■□□□ 1.55
C9orf3-213ENST00000471978 SLC16A4O15374 487 aa24.73■■□□□ 1.55
C9orf3-213ENST00000471978 ZMYND10O75800 440 aa24.73■■□□□ 1.55
C9orf3-213ENST00000471978 B3GAT3O94766 335 aa24.73■■□□□ 1.55
C9orf3-213ENST00000471978 CLCNKBP51801 687 aa24.73■■□□□ 1.55
C9orf3-213ENST00000471978 RAD51AP2Q09MP3 1159 aa24.73■■□□□ 1.55
C9orf3-213ENST00000471978 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.73■■□□□ 1.55
C9orf3-213ENST00000471978 UROC1Q96N76 676 aa24.73■■□□□ 1.55
C9orf3-213ENST00000471978 TCHPQ9BT92 498 aa24.73■■□□□ 1.55
C9orf3-213ENST00000471978 FBXW11Q9UKB1 542 aa24.73■■□□□ 1.55
C9orf3-213ENST00000471978 TMEM189-UBE2V1I3L0A0 370 aa24.72■■□□□ 1.55
C9orf3-213ENST00000471978 IGFBP6P24592 240 aaPredicted RBP24.72■■□□□ 1.55
C9orf3-213ENST00000471978 UPP1Q16831 310 aa24.72■■□□□ 1.55
C9orf3-213ENST00000471978 ARL6IP4Q66PJ3 421 aaKnown RBP24.72■■□□□ 1.55
C9orf3-213ENST00000471978 KCTD17Q8N5Z5 321 aa24.72■■□□□ 1.55
C9orf3-213ENST00000471978 SYT2Q8N9I0 419 aaPredicted RBP24.72■■□□□ 1.55
C9orf3-213ENST00000471978 CDK5RAP3Q96JB5 506 aa24.72■■□□□ 1.55
C9orf3-213ENST00000471978 MYADMQ96S97 322 aa24.72■■□□□ 1.55
C9orf3-213ENST00000471978 MFSD1Q9H3U5 465 aa24.72■■□□□ 1.55
C9orf3-213ENST00000471978 GOLGA2P5Q9HBQ8 144 aa24.72■■□□□ 1.55
C9orf3-213ENST00000471978 EPS15L1Q9UBC2 864 aa24.72■■□□□ 1.55
C9orf3-213ENST00000471978 ADAM12O43184 909 aa24.71■■□□□ 1.55
C9orf3-213ENST00000471978 MCF2P10911 925 aa24.71■■□□□ 1.55
C9orf3-213ENST00000471978 LIN9Q5TKA1 542 aa24.71■■□□□ 1.55
C9orf3-213ENST00000471978 LARP1BQ659C4 914 aaKnown RBP24.71■■□□□ 1.55
C9orf3-213ENST00000471978 ALKAL1Q6UXT8 129 aa24.71■■□□□ 1.55
C9orf3-213ENST00000471978 PHOX2BQ99453 314 aa24.71■■□□□ 1.55
C9orf3-213ENST00000471978 NTPCRQ9BSD7 190 aaKnown RBP24.71■■□□□ 1.55
C9orf3-213ENST00000471978 KCNG1Q9UIX4 513 aa24.71■■□□□ 1.55
C9orf3-213ENST00000471978 DUSP12Q9UNI6 340 aa24.71■■□□□ 1.55
C9orf3-213ENST00000471978 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.71■■□□□ 1.55
C9orf3-213ENST00000471978 PLS3P13797 630 aa24.7■■□□□ 1.54
C9orf3-213ENST00000471978 FGFR3P22607 806 aa24.7■■□□□ 1.54
C9orf3-213ENST00000471978 PROZP22891 400 aa24.7■■□□□ 1.54
C9orf3-213ENST00000471978 NUBP1P53384 320 aa24.7■■□□□ 1.54
C9orf3-213ENST00000471978 SLC12A3P55017 1021 aa24.7■■□□□ 1.54
C9orf3-213ENST00000471978 STRN3Q13033 797 aa24.7■■□□□ 1.54
C9orf3-213ENST00000471978 XKR4Q5GH76 650 aa24.7■■□□□ 1.54
C9orf3-213ENST00000471978 ASTLQ6HA08 431 aaPredicted RBP24.7■■□□□ 1.54
C9orf3-213ENST00000471978 MPZL3Q6UWV2 235 aa24.7■■□□□ 1.54
C9orf3-213ENST00000471978 CD300LGQ6UXG3 332 aa24.7■■□□□ 1.54
C9orf3-213ENST00000471978 SPIRE2Q8WWL2 714 aa24.7■■□□□ 1.54
C9orf3-213ENST00000471978 RSAD2Q8WXG1 361 aa24.7■■□□□ 1.54
C9orf3-213ENST00000471978 TBC1D32Q96NH3 1257 aa24.7■■□□□ 1.54
C9orf3-213ENST00000471978 ACAP3Q96P50 834 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms