RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 ZNF568Q3ZCX4 644 aa12.65□□□□□ -0.38
COL4A3-205ENST00000471862 RTP2Q5QGT7 225 aa12.65□□□□□ -0.38
COL4A3-205ENST00000471862 LILRA6Q6PI73 481 aa12.65□□□□□ -0.38
COL4A3-205ENST00000471862 CD300LGQ6UXG3 332 aa12.65□□□□□ -0.38
COL4A3-205ENST00000471862 ALKAL1Q6UXT8 129 aa12.65□□□□□ -0.38
COL4A3-205ENST00000471862 TRIM67Q6ZTA4 783 aa12.65□□□□□ -0.38
COL4A3-205ENST00000471862 APBB1IPQ7Z5R6 666 aaPredicted RBP12.65□□□□□ -0.38
COL4A3-205ENST00000471862 HDAC7Q8WUI4 952 aa12.65□□□□□ -0.38
COL4A3-205ENST00000471862 PIK3R5Q8WYR1 880 aa12.65□□□□□ -0.38
COL4A3-205ENST00000471862 CDK5RAP3Q96JB5 506 aa12.65□□□□□ -0.38
COL4A3-205ENST00000471862 USTQ9Y2C2 406 aa12.65□□□□□ -0.38
COL4A3-205ENST00000471862 NPHP3-ACAD11A0A0J9YXS1 232 aa12.64□□□□□ -0.39
COL4A3-205ENST00000471862 VPS37CA5D8V6 355 aaPredicted RBP12.64□□□□□ -0.39
COL4A3-205ENST00000471862 TMEM221A6NGB7 291 aa12.64□□□□□ -0.39
COL4A3-205ENST00000471862 M0R296 226 aa12.64□□□□□ -0.39
COL4A3-205ENST00000471862 MEFVO15553 781 aaPredicted RBP12.64□□□□□ -0.39
COL4A3-205ENST00000471862 MAPTP10636 758 aaKnown RBP12.64□□□□□ -0.39
COL4A3-205ENST00000471862 MCF2P10911 925 aa12.64□□□□□ -0.39
COL4A3-205ENST00000471862 PDCP20941 246 aa12.64□□□□□ -0.39
COL4A3-205ENST00000471862 IGFBP6P24592 240 aaPredicted RBP12.64□□□□□ -0.39
COL4A3-205ENST00000471862 PLA2G5P39877 138 aa12.64□□□□□ -0.39
COL4A3-205ENST00000471862 NCKAP1LP55160 1127 aa12.64□□□□□ -0.39
COL4A3-205ENST00000471862 CACNB1Q02641 598 aaPredicted RBP12.64□□□□□ -0.39
COL4A3-205ENST00000471862 SIGLEC14Q08ET2 396 aa12.64□□□□□ -0.39
COL4A3-205ENST00000471862 RAD51AP2Q09MP3 1159 aa12.64□□□□□ -0.39
COL4A3-205ENST00000471862 GLRA4Q5JXX5 417 aa12.64□□□□□ -0.39
COL4A3-205ENST00000471862 MPZL3Q6UWV2 235 aa12.64□□□□□ -0.39
COL4A3-205ENST00000471862 ZDHHC14Q8IZN3 488 aa12.64□□□□□ -0.39
COL4A3-205ENST00000471862 HASPINQ8TF76 798 aa12.64□□□□□ -0.39
COL4A3-205ENST00000471862 RIN2Q8WYP3 895 aaPredicted RBP12.64□□□□□ -0.39
COL4A3-205ENST00000471862 ASIC4Q96FT7 647 aa12.64□□□□□ -0.39
COL4A3-205ENST00000471862 INTS4Q96HW7 963 aaKnown RBP12.64□□□□□ -0.39
COL4A3-205ENST00000471862 ZBTB45Q96K62 511 aaPredicted RBP12.64□□□□□ -0.39
COL4A3-205ENST00000471862 SNX27Q96L92 541 aa12.64□□□□□ -0.39
COL4A3-205ENST00000471862 CCDC94Q9BW85 323 aaPredicted RBP12.64□□□□□ -0.39
COL4A3-205ENST00000471862 TSHZ2Q9NRE2 1034 aa12.64□□□□□ -0.39
COL4A3-205ENST00000471862 KCNG1Q9UIX4 513 aa12.64□□□□□ -0.39
COL4A3-205ENST00000471862 ODF2LQ9ULJ1 636 aa12.64□□□□□ -0.39
COL4A3-205ENST00000471862 MUC6Q6W4X9 2439 aa12.64□□□□□ -0.39
COL4A3-205ENST00000471862 DOCK6Q96HP0 2047 aa12.64□□□□□ -0.39
COL4A3-205ENST00000471862 KMT2EQ8IZD2 1858 aa12.63□□□□□ -0.39
COL4A3-205ENST00000471862 ZDBF2Q9HCK1 2354 aa12.63□□□□□ -0.39
COL4A3-205ENST00000471862 MYH15Q9Y2K3 1946 aa12.63□□□□□ -0.39
COL4A3-205ENST00000471862 SMIM28A0A1B0GU29 152 aa12.63□□□□□ -0.39
COL4A3-205ENST00000471862 TGM5O43548 720 aa12.63□□□□□ -0.39
COL4A3-205ENST00000471862 TOM1L1O75674 476 aa12.63□□□□□ -0.39
COL4A3-205ENST00000471862 RPL17P18621 184 aaKnown RBP12.63□□□□□ -0.39
COL4A3-205ENST00000471862 PLCG1P19174 1290 aa12.63□□□□□ -0.39
COL4A3-205ENST00000471862 SYT1P21579 422 aa12.63□□□□□ -0.39
COL4A3-205ENST00000471862 UBA7P41226 1012 aa12.63□□□□□ -0.39
COL4A3-205ENST00000471862 ZNF131P52739 623 aa12.63□□□□□ -0.39
COL4A3-205ENST00000471862 SMTNP53814 917 aa12.63□□□□□ -0.39
COL4A3-205ENST00000471862 CREMQ03060 361 aa12.63□□□□□ -0.39
COL4A3-205ENST00000471862 SOX4Q06945 474 aaPredicted RBP12.63□□□□□ -0.39
COL4A3-205ENST00000471862 ELAVL2Q12926 359 aaKnown RBP12.63□□□□□ -0.39
COL4A3-205ENST00000471862 KARSQ15046 597 aaKnown RBP12.63□□□□□ -0.39
COL4A3-205ENST00000471862 UPP1Q16831 310 aa12.63□□□□□ -0.39
COL4A3-205ENST00000471862 FAM171A1Q5VUB5 890 aa12.63□□□□□ -0.39
COL4A3-205ENST00000471862 PRSS55Q6UWB4 352 aaPredicted RBP12.63□□□□□ -0.39
COL4A3-205ENST00000471862 CYP26C1Q6V0L0 522 aa12.63□□□□□ -0.39
COL4A3-205ENST00000471862 ZPBP2Q6X784 338 aa12.63□□□□□ -0.39
COL4A3-205ENST00000471862 TDRD5Q8NAT2 981 aaKnown RBP12.63□□□□□ -0.39
COL4A3-205ENST00000471862 LNX1Q8TBB1 728 aaPredicted RBP12.63□□□□□ -0.39
COL4A3-205ENST00000471862 ZNF707Q96C28 371 aaPredicted RBP12.63□□□□□ -0.39
COL4A3-205ENST00000471862 CALML4Q96GE6 196 aa12.63□□□□□ -0.39
COL4A3-205ENST00000471862 UROC1Q96N76 676 aa12.63□□□□□ -0.39
COL4A3-205ENST00000471862 ZMAT2Q96NC0 199 aaKnown RBP12.63□□□□□ -0.39
COL4A3-205ENST00000471862 CLSTN3Q9BQT9 956 aa12.63□□□□□ -0.39
COL4A3-205ENST00000471862 REEP2Q9BRK0 252 aa12.63□□□□□ -0.39
COL4A3-205ENST00000471862 TTPALQ9BTX7 342 aa12.63□□□□□ -0.39
COL4A3-205ENST00000471862 CCSER1Q9C0I3 900 aa12.63□□□□□ -0.39
COL4A3-205ENST00000471862 PLEKHA4Q9H4M7 779 aa12.63□□□□□ -0.39
COL4A3-205ENST00000471862 GOLGA2P5Q9HBQ8 144 aa12.63□□□□□ -0.39
COL4A3-205ENST00000471862 TOPORSQ9NS56 1045 aaPredicted RBP12.63□□□□□ -0.39
COL4A3-205ENST00000471862 CNTN3Q9P232 1028 aa12.63□□□□□ -0.39
COL4A3-205ENST00000471862 LARSQ9P2J5 1176 aaKnown RBP12.63□□□□□ -0.39
COL4A3-205ENST00000471862 DPP7Q9UHL4 492 aa12.63□□□□□ -0.39
COL4A3-205ENST00000471862 CLIC4Q9Y696 253 aa12.63□□□□□ -0.39
COL4A3-205ENST00000471862 CCDC195A0A1B0GUA6 201 aa12.62□□□□□ -0.39
COL4A3-205ENST00000471862 RFPL2O75678 378 aa12.62□□□□□ -0.39
COL4A3-205ENST00000471862 KCNE1P15382 129 aa12.62□□□□□ -0.39
COL4A3-205ENST00000471862 FGFR3P22607 806 aa12.62□□□□□ -0.39
COL4A3-205ENST00000471862 CLCNKBP51801 687 aa12.62□□□□□ -0.39
COL4A3-205ENST00000471862 YARSP54577 528 aaKnown RBP12.62□□□□□ -0.39
COL4A3-205ENST00000471862 OSTNP61366 133 aa12.62□□□□□ -0.39
COL4A3-205ENST00000471862 MCL1Q07820 350 aa12.62□□□□□ -0.39
COL4A3-205ENST00000471862 MCM6Q14566 821 aa12.62□□□□□ -0.39
COL4A3-205ENST00000471862 NOLC1Q14978 699 aaKnown RBP eCLIP12.62□□□□□ -0.39
COL4A3-205ENST00000471862 FAM173BQ6P4H8 233 aa12.62□□□□□ -0.39
COL4A3-205ENST00000471862 DCLRE1AQ6PJP8 1040 aa12.62□□□□□ -0.39
COL4A3-205ENST00000471862 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.62□□□□□ -0.39
COL4A3-205ENST00000471862 CCDC149Q6ZUS6 474 aa12.62□□□□□ -0.39
COL4A3-205ENST00000471862 USP49Q70CQ1 688 aa12.62□□□□□ -0.39
COL4A3-205ENST00000471862 ZBTB33Q86T24 672 aa12.62□□□□□ -0.39
COL4A3-205ENST00000471862 GPBP1Q86WP2 473 aa12.62□□□□□ -0.39
COL4A3-205ENST00000471862 PALB2Q86YC2 1186 aa12.62□□□□□ -0.39
COL4A3-205ENST00000471862 GLYCTKQ8IVS8 523 aa12.62□□□□□ -0.39
COL4A3-205ENST00000471862 PLCD3Q8N3E9 789 aa12.62□□□□□ -0.39
COL4A3-205ENST00000471862 KREMEN2Q8NCW0 462 aa12.62□□□□□ -0.39
COL4A3-205ENST00000471862 C3orf58Q8NDZ4 430 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms