RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 NOVA1P51513 510 aaKnown RBP7.64□□□□□ -1.19
HDAC1-204ENST00000471488 CYP4A11Q02928 519 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 FUT2Q10981 343 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 GRIK3Q13003 919 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 TFDP1Q14186 410 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 EMC2Q15006 297 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 STPG1Q5TH74 334 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 RNF43Q68DV7 783 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 NCAPH2Q6IBW4 605 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 PDZD4Q76G19 769 aaPredicted RBP7.64□□□□□ -1.19
HDAC1-204ENST00000471488 MAEAQ7L5Y9 396 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 SGMS1Q86VZ5 419 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 LONP2Q86WA8 852 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 CCDC148Q8NFR7 591 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 LNX1Q8TBB1 728 aaPredicted RBP7.64□□□□□ -1.19
HDAC1-204ENST00000471488 TCP11Q8WWU5 503 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 CRYGNQ8WXF5 182 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 IRF7Q92985 503 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 TCEAL4Q96EI5 215 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 MBOAT7Q96N66 472 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 MTRQ99707 1265 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 ZMYND12Q9H0C1 365 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 KCNH3Q9ULD8 1083 aa7.64□□□□□ -1.19
HDAC1-204ENST00000471488 MTCL1Q9Y4B5 1905 aaKnown RBP7.64□□□□□ -1.19
HDAC1-204ENST00000471488 ATRXP46100 2492 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 WDR81Q562E7 1941 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 I3L4J1 428 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 GIPC1O14908 333 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 FOXD2O60548 495 aaPredicted RBP7.63□□□□□ -1.19
HDAC1-204ENST00000471488 PSMD10O75832 226 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 STBD1O95210 358 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 PRKCBP05771 671 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 CPA1P15085 419 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 ARF4P18085 180 aaPredicted RBP7.63□□□□□ -1.19
HDAC1-204ENST00000471488 AXLP30530 894 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 HOXA9P31269 272 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 RFC5P40937 340 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 VIPR2P41587 438 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 QARSP47897 775 aaKnown RBP7.63□□□□□ -1.19
HDAC1-204ENST00000471488 ZNF252P-AS1Q0IIN9 211 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 TUSC3Q13454 348 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 FZD5Q13467 585 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 LRRC32Q14392 662 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 FAM78AQ5JUQ0 283 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 CYP4A22Q5TCH4 519 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 RNF20Q5VTR2 975 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 TCEAL6Q6IPX3 200 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 KIAA1211LQ6NV74 962 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 SLC27A1Q6PCB7 646 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 Q6ZS52 159 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 OTUD6AQ7L8S5 288 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 FERMT3Q86UX7 667 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 TEX2Q8IWB9 1127 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 EXOC8Q8IYI6 725 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 ELMOD1Q8N336 334 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 RDM1Q8NG50 284 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 PIK3R5Q8WYR1 880 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 DNASE1L2Q92874 299 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 TCEAL3Q969E4 200 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 ELSPBP1Q96BH3 223 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 CEP89Q96ST8 783 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 LSG1Q9H089 658 aaKnown RBP7.63□□□□□ -1.19
HDAC1-204ENST00000471488 CYP4F11Q9HBI6 524 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 ZNF334Q9HCZ1 680 aaPredicted RBP7.63□□□□□ -1.19
HDAC1-204ENST00000471488 GDE1Q9NZC3 331 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 LHX6Q9UPM6 363 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 GDAQ9Y2T3 454 aa7.63□□□□□ -1.19
HDAC1-204ENST00000471488 CCDC196A0A1B0GTZ2 297 aa7.62□□□□□ -1.19
HDAC1-204ENST00000471488 ESYT2A0FGR8 921 aa7.62□□□□□ -1.19
HDAC1-204ENST00000471488 LRRIQ4A6NIV6 560 aa7.62□□□□□ -1.19
HDAC1-204ENST00000471488 EML1O00423 815 aa7.62□□□□□ -1.19
HDAC1-204ENST00000471488 ZBTB39O15060 712 aa7.62□□□□□ -1.19
HDAC1-204ENST00000471488 ASAP2O43150 1006 aa7.62□□□□□ -1.19
HDAC1-204ENST00000471488 DKC1O60832 514 aaKnown RBP eCLIP7.62□□□□□ -1.19
HDAC1-204ENST00000471488 RPP40O75818 363 aaKnown RBP7.62□□□□□ -1.19
HDAC1-204ENST00000471488 B3GAT3O94766 335 aa7.62□□□□□ -1.19
HDAC1-204ENST00000471488 ZIC2O95409 532 aaPredicted RBP7.62□□□□□ -1.19
HDAC1-204ENST00000471488 SEC24BO95487 1268 aa7.62□□□□□ -1.19
HDAC1-204ENST00000471488 TOP3BO95985 862 aaKnown RBP7.62□□□□□ -1.19
HDAC1-204ENST00000471488 THP07101 528 aa7.62□□□□□ -1.19
HDAC1-204ENST00000471488 TDGF1P13385 188 aa7.62□□□□□ -1.19
HDAC1-204ENST00000471488 PSMC3P17980 439 aa7.62□□□□□ -1.19
HDAC1-204ENST00000471488 TKTP29401 623 aaKnown RBP7.62□□□□□ -1.19
HDAC1-204ENST00000471488 YWHABP31946 246 aaKnown RBP7.62□□□□□ -1.19
HDAC1-204ENST00000471488 CNR2P34972 360 aa7.62□□□□□ -1.19
HDAC1-204ENST00000471488 USP11P51784 963 aa7.62□□□□□ -1.19
HDAC1-204ENST00000471488 CTTNQ14247 550 aaKnown RBP7.62□□□□□ -1.19
HDAC1-204ENST00000471488 GLRA4Q5JXX5 417 aa7.62□□□□□ -1.19
HDAC1-204ENST00000471488 PPP4R3AQ6IN85 833 aa7.62□□□□□ -1.19
HDAC1-204ENST00000471488 IQCEQ6IPM2 695 aa7.62□□□□□ -1.19
HDAC1-204ENST00000471488 PDXDC1Q6P996 788 aa7.62□□□□□ -1.19
HDAC1-204ENST00000471488 DHX32Q7L7V1 743 aaKnown RBP7.62□□□□□ -1.19
HDAC1-204ENST00000471488 KBTBD6Q86V97 674 aa7.62□□□□□ -1.19
HDAC1-204ENST00000471488 TPH2Q8IWU9 490 aa7.62□□□□□ -1.19
HDAC1-204ENST00000471488 SPEM1Q8N4L4 309 aa7.62□□□□□ -1.19
HDAC1-204ENST00000471488 ZCCHC14Q8WYQ9 949 aaKnown RBP7.62□□□□□ -1.19
HDAC1-204ENST00000471488 CCDC51Q96ER9 411 aa7.62□□□□□ -1.19
HDAC1-204ENST00000471488 DYDC2Q96IM9 177 aa7.62□□□□□ -1.19
HDAC1-204ENST00000471488 LXNQ9BS40 222 aa7.62□□□□□ -1.19
HDAC1-204ENST00000471488 SNTG2Q9NY99 539 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms