RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 CDR1P51861 262 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 USP14P54578 494 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 MGAT2Q10469 447 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 SAFBQ15424 915 aaKnown RBP eCLIP7.06□□□□□ -1.28
CKS1B-204ENST00000471245 GORABQ5T7V8 394 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 TMEM200BQ69YZ2 307 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 GRAMD4Q6IC98 578 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 DENND1CQ8IV53 801 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 TTLL6Q8N841 843 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 LINC00482Q8N8I6 264 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 GLB1L3Q8NCI6 653 aaPredicted RBP7.06□□□□□ -1.28
CKS1B-204ENST00000471245 NRG4Q8WWG1 115 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 KCNN1Q92952 543 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 DYDC2Q96IM9 177 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 SLC38A3Q99624 504 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 GORASP1Q9BQQ3 440 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 FDXACB1Q9BRP7 624 aaPredicted RBP7.06□□□□□ -1.28
CKS1B-204ENST00000471245 ADI1Q9BV57 179 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 TMEM60Q9H2L4 133 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 CNTD2Q9H8S5 307 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 USP25Q9UHP3 1055 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 MBD1Q9UIS9 605 aaPredicted RBP7.06□□□□□ -1.28
CKS1B-204ENST00000471245 LIMCH1Q9UPQ0 1083 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 NRKQ7Z2Y5 1582 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 SBNO1A3KN83 1393 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 ARHGEF10O15013 1369 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 MYOM1P52179 1685 aa7.06□□□□□ -1.28
CKS1B-204ENST00000471245 SPATA31A5Q5VU36 1347 aa7.05□□□□□ -1.28
CKS1B-204ENST00000471245 RPGRIP1LQ68CZ1 1315 aa7.05□□□□□ -1.28
CKS1B-204ENST00000471245 SPATA31A7Q8IWB4 1347 aa7.05□□□□□ -1.28
CKS1B-204ENST00000471245 A0A0A6YYK5 440 aaPredicted RBP7.05□□□□□ -1.28
CKS1B-204ENST00000471245 CCDC154A6NI56 674 aa7.05□□□□□ -1.28
CKS1B-204ENST00000471245 TUSC2O75896 110 aa7.05□□□□□ -1.28
CKS1B-204ENST00000471245 RHCEP18577 417 aa7.05□□□□□ -1.28
CKS1B-204ENST00000471245 FXR1P51114 621 aaKnown RBP eCLIP7.05□□□□□ -1.28
CKS1B-204ENST00000471245 RHDQ02161 417 aa7.05□□□□□ -1.28
CKS1B-204ENST00000471245 PICALMQ13492 652 aa7.05□□□□□ -1.28
CKS1B-204ENST00000471245 LMBR1LQ6UX01 489 aa7.05□□□□□ -1.28
CKS1B-204ENST00000471245 MIGA2Q7L4E1 593 aa7.05□□□□□ -1.28
CKS1B-204ENST00000471245 OVCH2Q7RTZ1 564 aa7.05□□□□□ -1.28
CKS1B-204ENST00000471245 C11orf96Q7Z7L8 435 aa7.05□□□□□ -1.28
CKS1B-204ENST00000471245 STPG3Q8N7X2 389 aa7.05□□□□□ -1.28
CKS1B-204ENST00000471245 MZB1Q8WU39 189 aa7.05□□□□□ -1.28
CKS1B-204ENST00000471245 HDAC10Q969S8 669 aa7.05□□□□□ -1.28
CKS1B-204ENST00000471245 SOX7Q9BT81 388 aa7.05□□□□□ -1.28
CKS1B-204ENST00000471245 C11orf84Q9BUA3 381 aaPredicted RBP7.05□□□□□ -1.28
CKS1B-204ENST00000471245 OSBPL6Q9BZF3 934 aa7.05□□□□□ -1.28
CKS1B-204ENST00000471245 STK26Q9P289 416 aa7.05□□□□□ -1.28
CKS1B-204ENST00000471245 CFAP20Q9Y6A4 193 aaKnown RBP7.05□□□□□ -1.28
CKS1B-204ENST00000471245 PHRF1Q9P1Y6 1649 aaKnown RBP7.05□□□□□ -1.28
CKS1B-204ENST00000471245 RRBP1Q9P2E9 1410 aaKnown RBP7.04□□□□□ -1.28
CKS1B-204ENST00000471245 A6NNZ2 444 aa7.04□□□□□ -1.28
CKS1B-204ENST00000471245 FAM171A2A8MVW0 826 aa7.04□□□□□ -1.28
CKS1B-204ENST00000471245 TPP1O14773 563 aa7.04□□□□□ -1.28
CKS1B-204ENST00000471245 MAN2A1Q16706 1144 aa7.04□□□□□ -1.28
CKS1B-204ENST00000471245 WDR72Q3MJ13 1102 aa7.04□□□□□ -1.28
CKS1B-204ENST00000471245 COBLL1Q53SF7 1204 aa7.04□□□□□ -1.28
CKS1B-204ENST00000471245 TMEM132EQ6IEE7 984 aa7.04□□□□□ -1.28
CKS1B-204ENST00000471245 FAM180AQ6UWF9 173 aa7.04□□□□□ -1.28
CKS1B-204ENST00000471245 SYDE1Q6ZW31 735 aaPredicted RBP7.04□□□□□ -1.28
CKS1B-204ENST00000471245 EXOC8Q8IYI6 725 aa7.04□□□□□ -1.28
CKS1B-204ENST00000471245 BCL6BQ8N143 479 aaPredicted RBP7.04□□□□□ -1.28
CKS1B-204ENST00000471245 CAMKK1Q8N5S9 505 aa7.04□□□□□ -1.28
CKS1B-204ENST00000471245 KYQ8NBH2 561 aa7.04□□□□□ -1.28
CKS1B-204ENST00000471245 MPHOSPH6Q99547 160 aaKnown RBP7.04□□□□□ -1.28
CKS1B-204ENST00000471245 SPON1Q9HCB6 807 aa7.04□□□□□ -1.28
CKS1B-204ENST00000471245 RBM12Q9NTZ6 932 aaKnown RBP7.04□□□□□ -1.28
CKS1B-204ENST00000471245 SAE1Q9UBE0 346 aaPredicted RBP7.04□□□□□ -1.28
CKS1B-204ENST00000471245 ABCC11Q96J66 1382 aa7.04□□□□□ -1.28
CKS1B-204ENST00000471245 A0A0G2JNJ9 132 aa7.03□□□□□ -1.28
CKS1B-204ENST00000471245 TSPAN15O95858 294 aa7.03□□□□□ -1.28
CKS1B-204ENST00000471245 KNG1P01042 644 aa7.03□□□□□ -1.28
CKS1B-204ENST00000471245 KRT1P04264 644 aa7.03□□□□□ -1.28
CKS1B-204ENST00000471245 DLG4P78352 724 aa7.03□□□□□ -1.28
CKS1B-204ENST00000471245 PPP3CAQ08209 521 aa7.03□□□□□ -1.28
CKS1B-204ENST00000471245 RTP5Q14D33 572 aa7.03□□□□□ -1.28
CKS1B-204ENST00000471245 C3orf36Q3SXR2 165 aa7.03□□□□□ -1.28
CKS1B-204ENST00000471245 OTOP2Q7RTS6 562 aa7.03□□□□□ -1.28
CKS1B-204ENST00000471245 IGDCC3Q8IVU1 814 aa7.03□□□□□ -1.28
CKS1B-204ENST00000471245 ZSWIM3Q96MP5 696 aa7.03□□□□□ -1.28
CKS1B-204ENST00000471245 GCM1Q9NP62 436 aa7.03□□□□□ -1.28
CKS1B-204ENST00000471245 Q9UFV3 132 aa7.03□□□□□ -1.28
CKS1B-204ENST00000471245 PARP4Q9UKK3 1724 aaKnown RBP7.03□□□□□ -1.28
CKS1B-204ENST00000471245 ADGRF5Q8IZF2 1346 aa7.02□□□□□ -1.28
CKS1B-204ENST00000471245 LOC102724159A0A0B4J2E5 919 aa7.02□□□□□ -1.29
CKS1B-204ENST00000471245 A0A1W2PR48 441 aa7.02□□□□□ -1.29
CKS1B-204ENST00000471245 H0Y858 1186 aa7.02□□□□□ -1.29
CKS1B-204ENST00000471245 APAF1O14727 1248 aa7.02□□□□□ -1.29
CKS1B-204ENST00000471245 N4BP3O15049 544 aa7.02□□□□□ -1.29
CKS1B-204ENST00000471245 B3GALT2O43825 422 aa7.02□□□□□ -1.29
CKS1B-204ENST00000471245 TMEM127O75204 238 aa7.02□□□□□ -1.29
CKS1B-204ENST00000471245 UBXN7O94888 489 aa7.02□□□□□ -1.29
CKS1B-204ENST00000471245 FSBPO95073 299 aa7.02□□□□□ -1.29
CKS1B-204ENST00000471245 IFIT2P09913 472 aaKnown RBP7.02□□□□□ -1.29
CKS1B-204ENST00000471245 COL6A1P12109 1028 aa7.02□□□□□ -1.29
CKS1B-204ENST00000471245 NCKAP1LP55160 1127 aa7.02□□□□□ -1.29
CKS1B-204ENST00000471245 ANTXR2P58335 489 aa7.02□□□□□ -1.29
CKS1B-204ENST00000471245 FAM193AP78312 1265 aa7.02□□□□□ -1.29
CKS1B-204ENST00000471245 MGAT5Q09328 741 aa7.02□□□□□ -1.29
CKS1B-204ENST00000471245 PWP2Q15269 919 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms