RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 PHKA2P46019 1235 aa9.94□□□□□ -0.82
PTPRE-207ENST00000471218 AP3M2P53677 418 aa9.94□□□□□ -0.82
PTPRE-207ENST00000471218 KCNA1Q09470 495 aa9.94□□□□□ -0.82
PTPRE-207ENST00000471218 LAMTOR4Q0VGL1 99 aa9.94□□□□□ -0.82
PTPRE-207ENST00000471218 KCNH2Q12809 1159 aa9.94□□□□□ -0.82
PTPRE-207ENST00000471218 PPFIA1Q13136 1202 aa9.94□□□□□ -0.82
PTPRE-207ENST00000471218 CAPSQ13938 189 aa9.94□□□□□ -0.82
PTPRE-207ENST00000471218 MAPK6Q16659 721 aa9.94□□□□□ -0.82
PTPRE-207ENST00000471218 EXOC3L4Q17RC7 722 aa9.94□□□□□ -0.82
PTPRE-207ENST00000471218 TIGD5Q53EQ6 642 aa9.94□□□□□ -0.82
PTPRE-207ENST00000471218 CEP135Q66GS9 1140 aa9.94□□□□□ -0.82
PTPRE-207ENST00000471218 GDF6Q6KF10 455 aaPredicted RBP9.94□□□□□ -0.82
PTPRE-207ENST00000471218 GBP6Q6ZN66 633 aa9.94□□□□□ -0.82
PTPRE-207ENST00000471218 CCDC170Q8IYT3 715 aa9.94□□□□□ -0.82
PTPRE-207ENST00000471218 GJD3Q8N144 294 aa9.94□□□□□ -0.82
PTPRE-207ENST00000471218 NEK11Q8NG66 645 aa9.94□□□□□ -0.82
PTPRE-207ENST00000471218 ASAP3Q8TDY4 903 aa9.94□□□□□ -0.82
PTPRE-207ENST00000471218 PRPF31Q8WWY3 499 aaKnown RBP9.94□□□□□ -0.82
PTPRE-207ENST00000471218 COPS5Q92905 334 aa9.94□□□□□ -0.82
PTPRE-207ENST00000471218 MAP7D2Q96T17 732 aa9.94□□□□□ -0.82
PTPRE-207ENST00000471218 MRPL4Q9BYD3 311 aaKnown RBP9.94□□□□□ -0.82
PTPRE-207ENST00000471218 CCDC113Q9H0I3 377 aa9.94□□□□□ -0.82
PTPRE-207ENST00000471218 EPHX3Q9H6B9 360 aa9.94□□□□□ -0.82
PTPRE-207ENST00000471218 UBE2ZQ9H832 354 aaPredicted RBP9.94□□□□□ -0.82
PTPRE-207ENST00000471218 SUGCTQ9HAC7 445 aa9.94□□□□□ -0.82
PTPRE-207ENST00000471218 ABHD10Q9NUJ1 306 aa9.94□□□□□ -0.82
PTPRE-207ENST00000471218 PRMT7Q9NVM4 692 aaPredicted RBP9.94□□□□□ -0.82
PTPRE-207ENST00000471218 PRKAG3Q9UGI9 489 aa9.94□□□□□ -0.82
PTPRE-207ENST00000471218 PLAGL2Q9UPG8 496 aa9.94□□□□□ -0.82
PTPRE-207ENST00000471218 ATP8B3O60423 1300 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 ADGRA3Q8IWK6 1321 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 TTC26A0AVF1 554 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 LRRIQ4A6NIV6 560 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 EXTL3O43909 919 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 LPXNO60711 386 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 GFPT2O94808 682 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 INSRRP14616 1297 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 SSTR3P32745 418 aaPredicted RBP9.93□□□□□ -0.82
PTPRE-207ENST00000471218 KRT9P35527 623 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 PSEN2P49810 448 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 LIG4P49917 911 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 PTENP60484 403 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 CLDN10P78369 228 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 MFSD10Q14728 455 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 SURF1Q15526 300 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 SNRNP35Q16560 246 aaKnown RBP9.93□□□□□ -0.82
PTPRE-207ENST00000471218 KIAA0753Q2KHM9 967 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 MAEAQ7L5Y9 396 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 SRGAP1Q7Z6B7 1085 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 TRIM50Q86XT4 487 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 TMEM139Q8IV31 216 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 GPD1LQ8N335 351 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 NME8Q8N427 588 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 FBXO22Q8NEZ5 403 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 SEPT8Q92599 483 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 APBB2Q92870 758 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 TMEM143Q96AN5 459 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 MRPL38Q96DV4 380 aaKnown RBP9.93□□□□□ -0.82
PTPRE-207ENST00000471218 MFSD14AQ96MC6 490 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 FZD8Q9H461 694 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 SUCLA2Q9P2R7 463 aaPredicted RBP9.93□□□□□ -0.82
PTPRE-207ENST00000471218 HDAC6Q9UBN7 1215 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 RWDD3Q9Y3V2 267 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 TELO2Q9Y4R8 837 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 BZW2Q9Y6E2 419 aaKnown RBP9.93□□□□□ -0.82
PTPRE-207ENST00000471218 WDR81Q562E7 1941 aa9.93□□□□□ -0.82
PTPRE-207ENST00000471218 REV3LO60673 3130 aa9.92□□□□□ -0.82
PTPRE-207ENST00000471218 A0A0B4J269 797 aa9.92□□□□□ -0.82
PTPRE-207ENST00000471218 SMIM35A0A1B0GVV1 85 aa9.92□□□□□ -0.82
PTPRE-207ENST00000471218 SSU72P8A0A1W2PR75 194 aa9.92□□□□□ -0.82
PTPRE-207ENST00000471218 LINC01553A4QN01 128 aa9.92□□□□□ -0.82
PTPRE-207ENST00000471218 EPOPA6NHQ4 379 aa9.92□□□□□ -0.82
PTPRE-207ENST00000471218 ZNF233A6NK53 670 aa9.92□□□□□ -0.82
PTPRE-207ENST00000471218 ACKR2O00590 384 aa9.92□□□□□ -0.82
PTPRE-207ENST00000471218 ZC3H11AO75152 810 aaKnown RBP eCLIP9.92□□□□□ -0.82
PTPRE-207ENST00000471218 CCDC172P0C7W6 258 aa9.92□□□□□ -0.82
PTPRE-207ENST00000471218 MARK3P27448 753 aa9.92□□□□□ -0.82
PTPRE-207ENST00000471218 ADSSP30520 456 aa9.92□□□□□ -0.82
PTPRE-207ENST00000471218 CASP14P31944 242 aa9.92□□□□□ -0.82
PTPRE-207ENST00000471218 FMO5P49326 533 aa9.92□□□□□ -0.82
PTPRE-207ENST00000471218 CYP2J2P51589 502 aa9.92□□□□□ -0.82
PTPRE-207ENST00000471218 VAMP7P51809 220 aa9.92□□□□□ -0.82
PTPRE-207ENST00000471218 LRMPQ12912 555 aa9.92□□□□□ -0.82
PTPRE-207ENST00000471218 NOLC1Q14978 699 aaKnown RBP eCLIP9.92□□□□□ -0.82
PTPRE-207ENST00000471218 GRIK4Q16099 956 aa9.92□□□□□ -0.82
PTPRE-207ENST00000471218 EFCAB12Q6NXP0 572 aa9.92□□□□□ -0.82
PTPRE-207ENST00000471218 TAF2Q6P1X5 1199 aa9.92□□□□□ -0.82
PTPRE-207ENST00000471218 MTHFD1LQ6UB35 978 aa9.92□□□□□ -0.82
PTPRE-207ENST00000471218 ZNF662Q6ZS27 426 aa9.92□□□□□ -0.82
PTPRE-207ENST00000471218 TSHZ1Q6ZSZ6 1077 aa9.92□□□□□ -0.82
PTPRE-207ENST00000471218 TAS1R3Q7RTX0 852 aa9.92□□□□□ -0.82
PTPRE-207ENST00000471218 RPAINQ86UA6 219 aa9.92□□□□□ -0.82
PTPRE-207ENST00000471218 CREBRFQ8IUR6 639 aa9.92□□□□□ -0.82
PTPRE-207ENST00000471218 POMGNT1Q8WZA1 660 aa9.92□□□□□ -0.82
PTPRE-207ENST00000471218 KAT2BQ92831 832 aa9.92□□□□□ -0.82
PTPRE-207ENST00000471218 BICD1Q96G01 975 aa9.92□□□□□ -0.82
PTPRE-207ENST00000471218 FAXDC2Q96IV6 333 aa9.92□□□□□ -0.82
PTPRE-207ENST00000471218 POP1Q99575 1024 aaKnown RBP9.92□□□□□ -0.82
PTPRE-207ENST00000471218 INO80BQ9C086 356 aaPredicted RBP9.92□□□□□ -0.82
PTPRE-207ENST00000471218 RNPEPQ9H4A4 650 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms