RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 ATP8B2P98198 1209 aa6.82□□□□□ -1.32
PRPF40A-206ENST00000471167 BEAN1Q3B7T3 259 aa6.82□□□□□ -1.32
PRPF40A-206ENST00000471167 EFCAB12Q6NXP0 572 aa6.82□□□□□ -1.32
PRPF40A-206ENST00000471167 C1orf162Q8NEQ5 155 aaPredicted RBP6.82□□□□□ -1.32
PRPF40A-206ENST00000471167 JADE3Q92613 823 aa6.82□□□□□ -1.32
PRPF40A-206ENST00000471167 CEP89Q96ST8 783 aa6.82□□□□□ -1.32
PRPF40A-206ENST00000471167 PUS7LQ9H0K6 701 aaKnown RBP6.82□□□□□ -1.32
PRPF40A-206ENST00000471167 DMRT1Q9Y5R6 373 aa6.82□□□□□ -1.32
PRPF40A-206ENST00000471167 SUV39H1O43463 412 aa6.81□□□□□ -1.32
PRPF40A-206ENST00000471167 CDK11BP21127 795 aaKnown RBP6.81□□□□□ -1.32
PRPF40A-206ENST00000471167 SP140Q13342 867 aa6.81□□□□□ -1.32
PRPF40A-206ENST00000471167 AGAP9Q5VTM2 703 aa6.81□□□□□ -1.32
PRPF40A-206ENST00000471167 PDZD4Q76G19 769 aaPredicted RBP6.81□□□□□ -1.32
PRPF40A-206ENST00000471167 NECAB2Q7Z6G3 386 aa6.81□□□□□ -1.32
PRPF40A-206ENST00000471167 PROKR1Q8TCW9 393 aa6.81□□□□□ -1.32
PRPF40A-206ENST00000471167 NRG4Q8WWG1 115 aa6.81□□□□□ -1.32
PRPF40A-206ENST00000471167 DCLRE1CQ96SD1 692 aaKnown RBP6.81□□□□□ -1.32
PRPF40A-206ENST00000471167 MRI1Q9BV20 369 aa6.81□□□□□ -1.32
PRPF40A-206ENST00000471167 SLITRK6Q9H5Y7 841 aa6.81□□□□□ -1.32
PRPF40A-206ENST00000471167 AJAP1Q9UKB5 411 aaPredicted RBP6.81□□□□□ -1.32
PRPF40A-206ENST00000471167 ACTL7AQ9Y615 435 aa6.81□□□□□ -1.32
PRPF40A-206ENST00000471167 A0A087X1B8 175 aa6.8□□□□□ -1.32
PRPF40A-206ENST00000471167 GABRDO14764 452 aa6.8□□□□□ -1.32
PRPF40A-206ENST00000471167 RECQL4O94761 1208 aa6.8□□□□□ -1.32
PRPF40A-206ENST00000471167 RBP3P10745 1247 aa6.8□□□□□ -1.32
PRPF40A-206ENST00000471167 C5AR1P21730 350 aa6.8□□□□□ -1.32
PRPF40A-206ENST00000471167 SLC6A2P23975 617 aa6.8□□□□□ -1.32
PRPF40A-206ENST00000471167 EDNRBP24530 442 aa6.8□□□□□ -1.32
PRPF40A-206ENST00000471167 SLC5A3P53794 718 aa6.8□□□□□ -1.32
PRPF40A-206ENST00000471167 INHBCP55103 352 aa6.8□□□□□ -1.32
PRPF40A-206ENST00000471167 SCAPQ12770 1279 aa6.8□□□□□ -1.32
PRPF40A-206ENST00000471167 MTM1Q13496 603 aa6.8□□□□□ -1.32
PRPF40A-206ENST00000471167 PPM1NQ8N819 430 aa6.8□□□□□ -1.32
PRPF40A-206ENST00000471167 GPR150Q8NGU9 434 aa6.8□□□□□ -1.32
PRPF40A-206ENST00000471167 TTPALQ9BTX7 342 aa6.8□□□□□ -1.32
PRPF40A-206ENST00000471167 TMX1Q9H3N1 280 aa6.8□□□□□ -1.32
PRPF40A-206ENST00000471167 FBXO34Q9NWN3 711 aa6.8□□□□□ -1.32
PRPF40A-206ENST00000471167 POGKQ9P215 609 aa6.8□□□□□ -1.32
PRPF40A-206ENST00000471167 ANKFY1Q9P2R3 1169 aa6.8□□□□□ -1.32
PRPF40A-206ENST00000471167 MCM8Q9UJA3 840 aa6.8□□□□□ -1.32
PRPF40A-206ENST00000471167 CLCA2Q9UQC9 943 aa6.8□□□□□ -1.32
PRPF40A-206ENST00000471167 MAP3K2Q9Y2U5 619 aa6.8□□□□□ -1.32
PRPF40A-206ENST00000471167 KATNA1O75449 491 aa6.79□□□□□ -1.32
PRPF40A-206ENST00000471167 NDUFA10O95299 355 aa6.79□□□□□ -1.32
PRPF40A-206ENST00000471167 WASP42768 502 aa6.79□□□□□ -1.32
PRPF40A-206ENST00000471167 PCBP2Q15366 365 aaKnown RBP eCLIP6.79□□□□□ -1.32
PRPF40A-206ENST00000471167 CRB2Q5IJ48 1285 aa6.79□□□□□ -1.32
PRPF40A-206ENST00000471167 ATXN7L2Q5T6C5 722 aaPredicted RBP6.79□□□□□ -1.32
PRPF40A-206ENST00000471167 OTUD7BQ6GQQ9 843 aa6.79□□□□□ -1.32
PRPF40A-206ENST00000471167 LAIR1Q6GTX8 287 aa6.79□□□□□ -1.32
PRPF40A-206ENST00000471167 DCBLD1Q8N8Z6 715 aa6.79□□□□□ -1.32
PRPF40A-206ENST00000471167 PRPF38AQ8NAV1 312 aaKnown RBP6.79□□□□□ -1.32
PRPF40A-206ENST00000471167 FAXDC2Q96IV6 333 aa6.79□□□□□ -1.32
PRPF40A-206ENST00000471167 ADI1Q9BV57 179 aa6.79□□□□□ -1.32
PRPF40A-206ENST00000471167 KLHL11Q9NVR0 708 aa6.79□□□□□ -1.32
PRPF40A-206ENST00000471167 FAM30AQ9NZY2 134 aa6.79□□□□□ -1.32
PRPF40A-206ENST00000471167 TRHDEQ9UKU6 1024 aa6.79□□□□□ -1.32
PRPF40A-206ENST00000471167 DNM3Q9UQ16 869 aa6.79□□□□□ -1.32
PRPF40A-206ENST00000471167 USP15Q9Y4E8 981 aaPredicted RBP6.79□□□□□ -1.32
PRPF40A-206ENST00000471167 WASHC2AQ641Q2 1341 aa6.78□□□□□ -1.32
PRPF40A-206ENST00000471167 RNASET2O00584 256 aaKnown RBP6.78□□□□□ -1.32
PRPF40A-206ENST00000471167 ABHD16AO95870 558 aa6.78□□□□□ -1.32
PRPF40A-206ENST00000471167 MT-CO1P00395 513 aa6.78□□□□□ -1.32
PRPF40A-206ENST00000471167 SNRPA1P09661 255 aaKnown RBP6.78□□□□□ -1.32
PRPF40A-206ENST00000471167 ZEB1P37275 1124 aaPredicted RBP6.78□□□□□ -1.32
PRPF40A-206ENST00000471167 RAP2BP61225 183 aa6.78□□□□□ -1.32
PRPF40A-206ENST00000471167 SYDE2Q5VT97 1194 aa6.78□□□□□ -1.32
PRPF40A-206ENST00000471167 MRGPRGQ86SM5 289 aa6.78□□□□□ -1.32
PRPF40A-206ENST00000471167 ZFP28Q8NHY6 868 aa6.78□□□□□ -1.32
PRPF40A-206ENST00000471167 PRRX2Q99811 253 aa6.78□□□□□ -1.32
PRPF40A-206ENST00000471167 IPPQ9Y573 584 aa6.78□□□□□ -1.32
PRPF40A-206ENST00000471167 LAG3P18627 525 aa6.77□□□□□ -1.33
PRPF40A-206ENST00000471167 BMPR1AP36894 532 aa6.77□□□□□ -1.33
PRPF40A-206ENST00000471167 GUCY2FP51841 1108 aa6.77□□□□□ -1.33
PRPF40A-206ENST00000471167 TARDBPQ13148 414 aaKnown RBP eCLIP6.77□□□□□ -1.332e-7■■■■□ 24.5
PRPF40A-206ENST00000471167 ODF1Q14990 250 aa6.77□□□□□ -1.33
PRPF40A-206ENST00000471167 ABCB5Q2M3G0 1257 aa6.77□□□□□ -1.33
PRPF40A-206ENST00000471167 TIGD2Q4W5G0 525 aa6.77□□□□□ -1.33
PRPF40A-206ENST00000471167 B3GNTL1Q67FW5 361 aaPredicted RBP6.77□□□□□ -1.33
PRPF40A-206ENST00000471167 PGM2L1Q6PCE3 622 aa6.77□□□□□ -1.33
PRPF40A-206ENST00000471167 SEM1Q6ZVN7 128 aa6.77□□□□□ -1.33
PRPF40A-206ENST00000471167 MED25Q71SY5 747 aa6.77□□□□□ -1.33
PRPF40A-206ENST00000471167 ARHGEF19Q8IW93 802 aa6.77□□□□□ -1.33
PRPF40A-206ENST00000471167 RHOT2Q8IXI1 618 aa6.77□□□□□ -1.33
PRPF40A-206ENST00000471167 BEND2Q8NDZ0 799 aa6.77□□□□□ -1.33
PRPF40A-206ENST00000471167 CPEB3Q8NE35 698 aaKnown RBP6.77□□□□□ -1.33
PRPF40A-206ENST00000471167 CASKIN2Q8WXE0 1202 aa6.77□□□□□ -1.33
PRPF40A-206ENST00000471167 RAB24Q969Q5 203 aa6.77□□□□□ -1.33
PRPF40A-206ENST00000471167 WDR11Q9BZH6 1224 aa6.77□□□□□ -1.33
PRPF40A-206ENST00000471167 SERHL2Q9H4I8 314 aa6.77□□□□□ -1.33
PRPF40A-206ENST00000471167 LANCL2Q9NS86 450 aa6.77□□□□□ -1.33
PRPF40A-206ENST00000471167 SYBUQ9NX95 663 aa6.77□□□□□ -1.33
PRPF40A-206ENST00000471167 VSX1Q9NZR4 365 aaPredicted RBP6.77□□□□□ -1.33
PRPF40A-206ENST00000471167 INTUQ9ULD6 942 aa6.77□□□□□ -1.33
PRPF40A-206ENST00000471167 LIMCH1Q9UPQ0 1083 aa6.77□□□□□ -1.33
PRPF40A-206ENST00000471167 TNKSO95271 1327 aa6.76□□□□□ -1.33
PRPF40A-206ENST00000471167 WDR33Q9C0J8 1336 aaKnown RBP6.76□□□□□ -1.33
PRPF40A-206ENST00000471167 GAGE12BA1L429 117 aa6.76□□□□□ -1.33
PRPF40A-206ENST00000471167 GAGE12HA6NDE8 117 aa6.76□□□□□ -1.33
PRPF40A-206ENST00000471167 UNC119BA6NIH7 251 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms