RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 ADAMTS9Q9P2N4 1935 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 CCDC163A0A0D9SF12 145 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 CLEC18AA5D8T8 446 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 FAM149AA5PLN7 773 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 KLRF2D3W0D1 207 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 SLC27A2O14975 620 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 PRC1O43663 620 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 DDAH1O94760 285 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 REC8O95072 547 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 EFEMP2O95967 443 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 SOD2P04179 222 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 ADH1AP07327 375 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 CD59P13987 128 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 RPL17P18621 184 aaKnown RBP6.61□□□□□ -1.35
VARS-222ENST00000470953 ATP4AP20648 1035 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 CCNE1P24864 410 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 GRNP28799 593 aaKnown RBP6.61□□□□□ -1.35
VARS-222ENST00000470953 STAT5BP51692 787 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 ACTR2P61160 394 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 RHDQ02161 417 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 LMAN2Q12907 356 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 NFATC3Q12968 1075 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 KRT32Q14532 448 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 TRIM61Q5EBN2 209 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 NOMO2Q5JPE7 1267 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 ODR4Q5SWX8 454 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 CREB3L3Q68CJ9 461 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 TANGO2Q6ICL3 276 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 PKN3Q6P5Z2 889 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 USP17L6PQ6QN14 398 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 CLEC18BQ6UXF7 455 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 FAM43BQ6ZT52 329 aaPredicted RBP6.61□□□□□ -1.35
VARS-222ENST00000470953 PLPPR4Q7Z2D5 763 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 NPAS3Q8IXF0 933 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 RNF168Q8IYW5 571 aaPredicted RBP6.61□□□□□ -1.35
VARS-222ENST00000470953 SAMD3Q8N6K7 520 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 CLEC18CQ8NCF0 446 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 GIMAP8Q8ND71 665 aaPredicted RBP6.61□□□□□ -1.35
VARS-222ENST00000470953 PIBF1Q8WXW3 757 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 TTC9Q92623 222 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 PIGSQ96S52 555 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 FAM117AQ9C073 453 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 AZI2Q9H6S1 392 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 RXFP1Q9HBX9 757 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 HCFC1R1Q9NWW0 138 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 ZDHHC7Q9NXF8 308 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 PIAS3Q9Y6X2 628 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 GOLGA4Q13439 2230 aaKnown RBP6.6□□□□□ -1.35
VARS-222ENST00000470953 NRP1O14786 923 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 CCL16O15467 120 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 RRP8O43159 456 aaKnown RBP6.6□□□□□ -1.35
VARS-222ENST00000470953 CYTH3O43739 400 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 SH3BP5O60239 455 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 C22orf31O95567 290 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 AFPP02771 609 aaKnown RBP6.6□□□□□ -1.35
VARS-222ENST00000470953 URODP06132 367 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 CALM1P0DP23 149 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 CALM2P0DP24 149 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 CALM3P0DP25 149 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 FCARP24071 287 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 PHKA2P46019 1235 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 GNAQP50148 359 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 CLCN3P51790 818 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 NLRP11P59045 1033 aaKnown RBP6.6□□□□□ -1.35
VARS-222ENST00000470953 TLE3Q04726 772 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 RNASELQ05823 741 aaKnown RBP6.6□□□□□ -1.35
VARS-222ENST00000470953 MAPK8IP2Q13387 824 aaPredicted RBP6.6□□□□□ -1.35
VARS-222ENST00000470953 HNRNPDQ14103 355 aaKnown RBP6.6□□□□□ -1.35
VARS-222ENST00000470953 LRRC32Q14392 662 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 GRM4Q14833 912 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 SEC23AQ15436 765 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 PKDCCQ504Y2 493 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 ERICH6BQ5W0A0 696 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 CYP2U1Q7Z449 544 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 NLRX1Q86UT6 975 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 MICU3Q86XE3 530 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 MB21D2Q8IYB1 491 aaPredicted RBP6.6□□□□□ -1.35
VARS-222ENST00000470953 ZNF654Q8IZM8 581 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 HDDC3Q8N4P3 179 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 METTL13Q8N6R0 699 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 HDAC7Q8WUI4 952 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 CUL5Q93034 780 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 GPRASP2Q96D09 838 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 RRP36Q96EU6 259 aaKnown RBP6.6□□□□□ -1.35
VARS-222ENST00000470953 TMEM87BQ96K49 555 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 HERC2P3Q9BVR0 1158 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 LSG1Q9H089 658 aaKnown RBP6.6□□□□□ -1.35
VARS-222ENST00000470953 PLEKHA4Q9H4M7 779 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 JPH1Q9HDC5 661 aaPredicted RBP6.6□□□□□ -1.35
VARS-222ENST00000470953 POLR3BQ9NW08 1133 aaPredicted RBP6.6□□□□□ -1.35
VARS-222ENST00000470953 PPP4R2Q9NY27 417 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 EVLQ9UI08 416 aaPredicted RBP6.6□□□□□ -1.35
VARS-222ENST00000470953 MAD2L2Q9UI95 211 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 SLC12A7Q9Y666 1083 aa6.6□□□□□ -1.35
VARS-222ENST00000470953 MEIS2O14770 477 aa6.59□□□□□ -1.35
VARS-222ENST00000470953 HBP1O60381 514 aa6.59□□□□□ -1.35
VARS-222ENST00000470953 ECI2O75521 394 aa6.59□□□□□ -1.35
VARS-222ENST00000470953 C8AP07357 584 aa6.59□□□□□ -1.35
VARS-222ENST00000470953 EIF4BP23588 611 aaKnown RBP6.59□□□□□ -1.35
VARS-222ENST00000470953 GBP1P32455 592 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms