RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 FSHRP23945 695 aa9.86□□□□□ -0.83
XRN1-208ENST00000470537 ADD1P35611 737 aaKnown RBP9.86□□□□□ -0.83
XRN1-208ENST00000470537 RFC5P40937 340 aa9.86□□□□□ -0.83
XRN1-208ENST00000470537 NRLP54845 237 aa9.86□□□□□ -0.83
XRN1-208ENST00000470537 NLRP5P59047 1200 aa9.86□□□□□ -0.83
XRN1-208ENST00000470537 CACNA1BQ00975 2339 aa9.86□□□□□ -0.83
XRN1-208ENST00000470537 DRP2Q13474 957 aa9.86□□□□□ -0.83
XRN1-208ENST00000470537 MXD4Q14582 209 aaPredicted RBP9.86□□□□□ -0.83
XRN1-208ENST00000470537 Q4G0T1 1027 aa9.86□□□□□ -0.83
XRN1-208ENST00000470537 ZBTB41Q5SVQ8 909 aa9.86□□□□□ -0.83
XRN1-208ENST00000470537 NOTUMQ6P988 496 aa9.86□□□□□ -0.83
XRN1-208ENST00000470537 PDXDC1Q6P996 788 aa9.86□□□□□ -0.83
XRN1-208ENST00000470537 RTL10Q7L3V2 364 aa9.86□□□□□ -0.83
XRN1-208ENST00000470537 PALB2Q86YC2 1186 aa9.86□□□□□ -0.83
XRN1-208ENST00000470537 FAM177A1Q8N128 213 aaPredicted RBP9.86□□□□□ -0.83
XRN1-208ENST00000470537 LENG9Q96B70 501 aa9.86□□□□□ -0.83
XRN1-208ENST00000470537 MYADMQ96S97 322 aa9.86□□□□□ -0.83
XRN1-208ENST00000470537 VN1R3Q9BXE9 311 aa9.86□□□□□ -0.83
XRN1-208ENST00000470537 TRIM6Q9C030 488 aaPredicted RBP9.86□□□□□ -0.83
XRN1-208ENST00000470537 UNC45AQ9H3U1 944 aa9.86□□□□□ -0.83
XRN1-208ENST00000470537 IFT122Q9HBG6 1241 aa9.86□□□□□ -0.83
XRN1-208ENST00000470537 CHST7Q9NS84 486 aa9.86□□□□□ -0.83
XRN1-208ENST00000470537 DLGAP2Q9P1A6 1054 aa9.86□□□□□ -0.83
XRN1-208ENST00000470537 PRG3Q9Y2Y8 225 aaPredicted RBP9.86□□□□□ -0.83
XRN1-208ENST00000470537 ARL5CA6NH57 179 aa9.85□□□□□ -0.83
XRN1-208ENST00000470537 MEIS3P2A8K0S8 358 aa9.85□□□□□ -0.83
XRN1-208ENST00000470537 TBC1D4O60343 1298 aa9.85□□□□□ -0.83
XRN1-208ENST00000470537 XYLBO75191 536 aa9.85□□□□□ -0.83
XRN1-208ENST00000470537 RFPL2O75678 378 aa9.85□□□□□ -0.83
XRN1-208ENST00000470537 ZMYND10O75800 440 aa9.85□□□□□ -0.83
XRN1-208ENST00000470537 HNRNPA1P09651 372 aaKnown RBP eCLIP9.85□□□□□ -0.83
XRN1-208ENST00000470537 CDC27P30260 824 aa9.85□□□□□ -0.83
XRN1-208ENST00000470537 QARSP47897 775 aaKnown RBP9.85□□□□□ -0.83
XRN1-208ENST00000470537 HTR4Q13639 388 aa9.85□□□□□ -0.83
XRN1-208ENST00000470537 TFDP1Q14186 410 aa9.85□□□□□ -0.83
XRN1-208ENST00000470537 UGCGQ16739 394 aa9.85□□□□□ -0.83
XRN1-208ENST00000470537 LIN9Q5TKA1 542 aa9.85□□□□□ -0.83
XRN1-208ENST00000470537 GALNT17Q6IS24 598 aa9.85□□□□□ -0.83
XRN1-208ENST00000470537 MOXD1Q6UVY6 613 aa9.85□□□□□ -0.83
XRN1-208ENST00000470537 GET4Q7L5D6 327 aaPredicted RBP9.85□□□□□ -0.83
XRN1-208ENST00000470537 COLGALT2Q8IYK4 626 aa9.85□□□□□ -0.83
XRN1-208ENST00000470537 TRIM22Q8IYM9 498 aa9.85□□□□□ -0.83
XRN1-208ENST00000470537 SUMF1Q8NBK3 374 aa9.85□□□□□ -0.83
XRN1-208ENST00000470537 PRPF31Q8WWY3 499 aaKnown RBP9.85□□□□□ -0.83
XRN1-208ENST00000470537 CEP170P1Q96L14 293 aa9.85□□□□□ -0.83
XRN1-208ENST00000470537 RTKNQ9BST9 563 aa9.85□□□□□ -0.83
XRN1-208ENST00000470537 RNF26Q9BY78 433 aaPredicted RBP9.85□□□□□ -0.83
XRN1-208ENST00000470537 SLKQ9H2G2 1235 aaPredicted RBP9.85□□□□□ -0.83
XRN1-208ENST00000470537 ZSCAN32Q9NX65 697 aa9.85□□□□□ -0.83
XRN1-208ENST00000470537 CDH7Q9ULB5 785 aa9.85□□□□□ -0.83
XRN1-208ENST00000470537 RAB23Q9ULC3 237 aa9.85□□□□□ -0.83
XRN1-208ENST00000470537 GIT1Q9Y2X7 761 aa9.85□□□□□ -0.83
XRN1-208ENST00000470537 NUMBLQ9Y6R0 609 aa9.85□□□□□ -0.83
XRN1-208ENST00000470537 CYP3A7-CYP3A51PA0A087WV96 503 aa9.84□□□□□ -0.83
XRN1-208ENST00000470537 FAM170BA6NMN3 283 aa9.84□□□□□ -0.83
XRN1-208ENST00000470537 SOBPA7XYQ1 873 aa9.84□□□□□ -0.83
XRN1-208ENST00000470537 TGM5O43548 720 aa9.84□□□□□ -0.83
XRN1-208ENST00000470537 FOXD2O60548 495 aaPredicted RBP9.84□□□□□ -0.83
XRN1-208ENST00000470537 TADA2AO75478 443 aa9.84□□□□□ -0.83
XRN1-208ENST00000470537 P4HBP07237 508 aaKnown RBP9.84□□□□□ -0.83
XRN1-208ENST00000470537 CYP3A7P24462 503 aa9.84□□□□□ -0.83
XRN1-208ENST00000470537 HOXA9P31269 272 aa9.84□□□□□ -0.83
XRN1-208ENST00000470537 GPC5P78333 572 aa9.84□□□□□ -0.83
XRN1-208ENST00000470537 POU5F1BQ06416 359 aa9.84□□□□□ -0.83
XRN1-208ENST00000470537 DSC1Q08554 894 aa9.84□□□□□ -0.83
XRN1-208ENST00000470537 LAMTOR4Q0VGL1 99 aa9.84□□□□□ -0.83
XRN1-208ENST00000470537 ARID5BQ14865 1188 aa9.84□□□□□ -0.83
XRN1-208ENST00000470537 UBXN2BQ14CS0 331 aa9.84□□□□□ -0.83
XRN1-208ENST00000470537 MLF2Q15773 248 aaPredicted RBP9.84□□□□□ -0.83
XRN1-208ENST00000470537 AMHR2Q16671 573 aa9.84□□□□□ -0.83
XRN1-208ENST00000470537 UVSSAQ2YD98 709 aa9.84□□□□□ -0.83
XRN1-208ENST00000470537 SLC44A4Q53GD3 710 aa9.84□□□□□ -0.83
XRN1-208ENST00000470537 LILRA6Q6PI73 481 aa9.84□□□□□ -0.83
XRN1-208ENST00000470537 ANO5Q75V66 913 aa9.84□□□□□ -0.83
XRN1-208ENST00000470537 KSR1Q8IVT5 923 aa9.84□□□□□ -0.83
XRN1-208ENST00000470537 RNF168Q8IYW5 571 aaPredicted RBP9.84□□□□□ -0.83
XRN1-208ENST00000470537 DCLK2Q8N568 766 aa9.84□□□□□ -0.83
XRN1-208ENST00000470537 RNF149Q8NC42 400 aa9.84□□□□□ -0.83
XRN1-208ENST00000470537 TBCKQ8TEA7 893 aa9.84□□□□□ -0.83
XRN1-208ENST00000470537 ZNF707Q96C28 371 aaPredicted RBP9.84□□□□□ -0.83
XRN1-208ENST00000470537 FAM20AQ96MK3 541 aa9.84□□□□□ -0.83
XRN1-208ENST00000470537 CEP89Q96ST8 783 aa9.84□□□□□ -0.83
XRN1-208ENST00000470537 GMEB2Q9UKD1 530 aa9.84□□□□□ -0.83
XRN1-208ENST00000470537 ADAM28Q9UKQ2 775 aa9.84□□□□□ -0.83
XRN1-208ENST00000470537 C2orf16Q68DN1 1984 aa9.84□□□□□ -0.83
XRN1-208ENST00000470537 OTOGLQ3ZCN5 2332 aa9.84□□□□□ -0.83
XRN1-208ENST00000470537 WDR81Q562E7 1941 aa9.84□□□□□ -0.83
XRN1-208ENST00000470537 SF3B1O75533 1304 aaKnown RBP eCLIP9.83□□□□□ -0.84
XRN1-208ENST00000470537 CEP250Q9BV73 2442 aa9.83□□□□□ -0.84
XRN1-208ENST00000470537 MARCH6O60337 910 aa9.83□□□□□ -0.84
XRN1-208ENST00000470537 SPATA31D3P0C874 917 aa9.83□□□□□ -0.84
XRN1-208ENST00000470537 HOXA11P31270 313 aaPredicted RBP9.83□□□□□ -0.84
XRN1-208ENST00000470537 ATXN1P54253 815 aaKnown RBP9.83□□□□□ -0.84
XRN1-208ENST00000470537 CSTF1Q05048 431 aaKnown RBP9.83□□□□□ -0.84
XRN1-208ENST00000470537 ELAVL2Q12926 359 aaKnown RBP9.83□□□□□ -0.84
XRN1-208ENST00000470537 SNW1Q13573 536 aaKnown RBP9.83□□□□□ -0.84
XRN1-208ENST00000470537 PPM1LQ5SGD2 360 aa9.83□□□□□ -0.84
XRN1-208ENST00000470537 FUT10Q6P4F1 479 aa9.83□□□□□ -0.84
XRN1-208ENST00000470537 LYPD8Q6UX82 237 aa9.83□□□□□ -0.84
XRN1-208ENST00000470537 ZNF852Q6ZMS4 543 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms