RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 JAK3P52333 1124 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 BEX3Q00994 111 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 PPP2R3AQ06190 1150 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 ANO5Q75V66 913 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 RELL1Q8IUW5 271 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 TPH2Q8IWU9 490 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 SLC43A3Q8NBI5 491 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 GIMAP8Q8ND71 665 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-208ENST00000470268 OR6J1Q8NGC5 347 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 PPTC7Q8NI37 304 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 PPP1R13LQ8WUF5 828 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 NUDT8Q8WV74 236 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 TMEM74Q96NL1 305 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 C16orf70Q9BSU1 422 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 LACRTQ9GZZ8 138 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 KBTBD4Q9NVX7 518 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 MKI67P46013 3256 aaKnown RBP5.26□□□□□ -1.57
SF3B1-208ENST00000470268 SYNRGQ9UMZ2 1314 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 KIAA1217Q5T5P2 1943 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 RBAK-RBAKDNI3L0D1 243 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 NOP56O00567 594 aaKnown RBP5.26□□□□□ -1.57
SF3B1-208ENST00000470268 NKRFO15226 690 aaKnown RBP eCLIP5.26□□□□□ -1.57
SF3B1-208ENST00000470268 LGALS2P05162 132 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 MMP3P08254 477 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 SLFN14P0C7P3 912 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 ZNF286BP0CG31 522 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 ESRRAP11474 423 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-208ENST00000470268 QARSP47897 775 aaKnown RBP5.26□□□□□ -1.57
SF3B1-208ENST00000470268 AFF1P51825 1210 aaKnown RBP5.26□□□□□ -1.57
SF3B1-208ENST00000470268 NPEPPSP55786 919 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 GJA9P57773 515 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 PSMC5P62195 406 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 RPS26P62854 115 aaKnown RBP5.26□□□□□ -1.57
SF3B1-208ENST00000470268 CAMK4Q16566 473 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 ZNF423Q2M1K9 1284 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 UTP14CQ5TAP6 766 aaKnown RBP5.26□□□□□ -1.57
SF3B1-208ENST00000470268 RRAGBQ5VZM2 374 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 HAUS3Q68CZ6 603 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 CCSAPQ6IQ19 270 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-208ENST00000470268 GDF6Q6KF10 455 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-208ENST00000470268 KRBA2Q6ZNG9 492 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 CCDC73Q6ZRK6 1079 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 CTU1Q7Z7A3 348 aaKnown RBP5.26□□□□□ -1.57
SF3B1-208ENST00000470268 C4orf19Q8IY42 314 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 RDM1Q8NG50 284 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 ERMNQ8TAM6 284 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 AFAP1L1Q8TED9 768 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 KAT2BQ92831 832 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 RNPEPQ9H4A4 650 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 SOX17Q9H6I2 414 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-208ENST00000470268 TUFT1Q9NNX1 390 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 ZNF302Q9NR11 478 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 DDX20Q9UHI6 824 aaKnown RBP5.26□□□□□ -1.57
SF3B1-208ENST00000470268 Q9Y3F1 56 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 PCDHGB7Q9Y5F8 929 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 CASP8AP2Q9UKL3 1982 aa5.26□□□□□ -1.57
SF3B1-208ENST00000470268 DOCK5Q9H7D0 1870 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 EMSYQ7Z589 1322 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 H3BRJ5 948 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 PPFIA4O75335 1185 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 LYPLA2O95372 231 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 MBD3O95983 291 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 CELA3AP09093 270 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 C6orf222P0C671 652 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-208ENST00000470268 RARBP10826 455 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 EPHA1P21709 976 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 MARK3P27448 753 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 YWHABP31946 246 aaKnown RBP5.25□□□□□ -1.57
SF3B1-208ENST00000470268 STAT6P42226 847 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 AFMP43652 599 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 STAT5BP51692 787 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 SLC12A3P55017 1021 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 NKX3-2P78367 333 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 PRKCEQ02156 737 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 IKBKEQ14164 716 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 DHX8Q14562 1220 aaKnown RBP5.25□□□□□ -1.57
SF3B1-208ENST00000470268 FSCN1Q16658 493 aaKnown RBP5.25□□□□□ -1.57
SF3B1-208ENST00000470268 SKOR2Q2VWA4 1001 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-208ENST00000470268 SLC9C1Q4G0N8 1177 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 ARSHQ5FYA8 562 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 PLA2G4FQ68DD2 849 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 MIS18BP1Q6P0N0 1132 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 FBXO46Q6PJ61 603 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-208ENST00000470268 IQUBQ8NA54 791 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 CNNM3Q8NE01 707 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 KLHDC9Q8NEP7 349 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 RASSF8Q8NHQ8 419 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 NEK9Q8TD19 979 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 LARP4BQ92615 738 aaKnown RBP5.25□□□□□ -1.57
SF3B1-208ENST00000470268 RAD54LQ92698 747 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 WNT8BQ93098 351 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 CALML4Q96GE6 196 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 PAGE5Q96GU1 130 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 CEP89Q96ST8 783 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 TRIM56Q9BRZ2 755 aaKnown RBP5.25□□□□□ -1.57
SF3B1-208ENST00000470268 NT5C3AQ9H0P0 336 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 UPF3AQ9H1J1 476 aaKnown RBP5.25□□□□□ -1.57
SF3B1-208ENST00000470268 BHMT2Q9H2M3 363 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 ACBD3Q9H3P7 528 aa5.25□□□□□ -1.57
SF3B1-208ENST00000470268 ZSWIM4Q9H7M6 989 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms