RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 ABI1Q8IZP0 508 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 ZMAT2Q96NC0 199 aaKnown RBP11.49□□□□□ -0.57
SMC1A-206ENST00000470241 TSG101Q99816 390 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 PBX4Q9BYU1 374 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 RPF1Q9H9Y2 349 aaKnown RBP11.49□□□□□ -0.57
SMC1A-206ENST00000470241 PLEKHA5Q9HAU0 1116 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 KIAA1586Q9HCI6 787 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 TOPORSQ9NS56 1045 aaPredicted RBP11.49□□□□□ -0.57
SMC1A-206ENST00000470241 TBC1D13Q9NVG8 400 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 ANO10Q9NW15 660 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 CNTN3Q9P232 1028 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 HCSTQ9UBK5 93 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 RWDD2AQ9UIY3 292 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 PLAGL2Q9UPG8 496 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 PCDHA11Q9Y5I1 949 aa11.49□□□□□ -0.57
SMC1A-206ENST00000470241 SMIM28A0A1B0GU29 152 aa11.48□□□□□ -0.57
SMC1A-206ENST00000470241 ZNF233A6NK53 670 aa11.48□□□□□ -0.57
SMC1A-206ENST00000470241 LACTBL1A8MY62 500 aa11.48□□□□□ -0.57
SMC1A-206ENST00000470241 B4GALT3O60512 393 aa11.48□□□□□ -0.57
SMC1A-206ENST00000470241 LINC00271P0C7V0 271 aa11.48□□□□□ -0.57
SMC1A-206ENST00000470241 KCNE1P15382 129 aa11.48□□□□□ -0.57
SMC1A-206ENST00000470241 RPL13P26373 211 aaKnown RBP11.48□□□□□ -0.57
SMC1A-206ENST00000470241 SMAD3P84022 425 aaKnown RBP11.48□□□□□ -0.57
SMC1A-206ENST00000470241 SPAG1Q07617 926 aa11.48□□□□□ -0.57
SMC1A-206ENST00000470241 BTG3Q14201 252 aaPredicted RBP11.48□□□□□ -0.57
SMC1A-206ENST00000470241 NAB2Q15742 525 aa11.48□□□□□ -0.57
SMC1A-206ENST00000470241 RAB30Q15771 203 aa11.48□□□□□ -0.57
SMC1A-206ENST00000470241 SNRNP35Q16560 246 aaKnown RBP11.48□□□□□ -0.57
SMC1A-206ENST00000470241 GLRA4Q5JXX5 417 aa11.48□□□□□ -0.57
SMC1A-206ENST00000470241 C11orf57Q6ZUT1 292 aaPredicted RBP11.48□□□□□ -0.57
SMC1A-206ENST00000470241 LRRC43Q8N309 656 aa11.48□□□□□ -0.57
SMC1A-206ENST00000470241 RDH13Q8NBN7 331 aa11.48□□□□□ -0.57
SMC1A-206ENST00000470241 URGCPQ8TCY9 931 aa11.48□□□□□ -0.57
SMC1A-206ENST00000470241 NOC3LQ8WTT2 800 aaKnown RBP11.48□□□□□ -0.57
SMC1A-206ENST00000470241 RSPH1Q8WYR4 309 aa11.48□□□□□ -0.57
SMC1A-206ENST00000470241 EEF2KMTQ96G04 330 aa11.48□□□□□ -0.57
SMC1A-206ENST00000470241 RPS6KC1Q96S38 1066 aa11.48□□□□□ -0.57
SMC1A-206ENST00000470241 MRPL9Q9BYD2 267 aaKnown RBP11.48□□□□□ -0.57
SMC1A-206ENST00000470241 GZF1Q9H116 711 aaPredicted RBP11.48□□□□□ -0.57
SMC1A-206ENST00000470241 RBAKQ9NYW8 714 aaPredicted RBP11.48□□□□□ -0.57
SMC1A-206ENST00000470241 DACH1Q9UI36 760 aa11.48□□□□□ -0.57
SMC1A-206ENST00000470241 MRPL42Q9Y6G3 142 aaKnown RBP11.48□□□□□ -0.57
SMC1A-206ENST00000470241 PTPRSQ13332 1948 aa11.48□□□□□ -0.57
SMC1A-206ENST00000470241 BICDL2A1A5D9 508 aa11.47□□□□□ -0.57
SMC1A-206ENST00000470241 CETN3O15182 167 aa11.47□□□□□ -0.57
SMC1A-206ENST00000470241 AKAP3O75969 853 aa11.47□□□□□ -0.57
SMC1A-206ENST00000470241 DDHD2O94830 711 aa11.47□□□□□ -0.57
SMC1A-206ENST00000470241 CA3P07451 260 aa11.47□□□□□ -0.57
SMC1A-206ENST00000470241 ERCC5P28715 1186 aaPredicted RBP11.47□□□□□ -0.57
SMC1A-206ENST00000470241 FKBP3Q00688 224 aaKnown RBP11.47□□□□□ -0.57
SMC1A-206ENST00000470241 PPP2R3AQ06190 1150 aa11.47□□□□□ -0.57
SMC1A-206ENST00000470241 CYP24A1Q07973 514 aa11.47□□□□□ -0.57
SMC1A-206ENST00000470241 DSC1Q08554 894 aa11.47□□□□□ -0.57
SMC1A-206ENST00000470241 GRIK3Q13003 919 aa11.47□□□□□ -0.57
SMC1A-206ENST00000470241 ZBTB6Q15916 424 aa11.47□□□□□ -0.57
SMC1A-206ENST00000470241 CT47A1Q5JQC4 288 aaPredicted RBP11.47□□□□□ -0.57
SMC1A-206ENST00000470241 CEP135Q66GS9 1140 aa11.47□□□□□ -0.57
SMC1A-206ENST00000470241 ZNF280BQ86YH2 543 aa11.47□□□□□ -0.57
SMC1A-206ENST00000470241 CD302Q8IX05 232 aa11.47□□□□□ -0.57
SMC1A-206ENST00000470241 FIBCD1Q8N539 461 aa11.47□□□□□ -0.57
SMC1A-206ENST00000470241 PLEKHO2Q8TD55 490 aa11.47□□□□□ -0.57
SMC1A-206ENST00000470241 FAM212AQ96EL1 285 aa11.47□□□□□ -0.57
SMC1A-206ENST00000470241 MFSD14AQ96MC6 490 aa11.47□□□□□ -0.57
SMC1A-206ENST00000470241 PPP1R10Q96QC0 940 aaKnown RBP11.47□□□□□ -0.57
SMC1A-206ENST00000470241 NKX2-4Q9H2Z4 354 aa11.47□□□□□ -0.57
SMC1A-206ENST00000470241 ASB7Q9H672 318 aa11.47□□□□□ -0.57
SMC1A-206ENST00000470241 CWH43Q9H720 699 aa11.47□□□□□ -0.57
SMC1A-206ENST00000470241 NRDE2Q9H7Z3 1164 aa11.47□□□□□ -0.57
SMC1A-206ENST00000470241 KANSL3Q9P2N6 904 aa11.47□□□□□ -0.57
SMC1A-206ENST00000470241 RANBP2P49792 3224 aaKnown RBP11.46□□□□□ -0.57
SMC1A-206ENST00000470241 LINC01553A4QN01 128 aa11.46□□□□□ -0.57
SMC1A-206ENST00000470241 SOX1O00570 391 aaPredicted RBP11.46□□□□□ -0.57
SMC1A-206ENST00000470241 MAPK13O15264 365 aa11.46□□□□□ -0.57
SMC1A-206ENST00000470241 IL18RAPO95256 599 aa11.46□□□□□ -0.57
SMC1A-206ENST00000470241 THP07101 528 aa11.46□□□□□ -0.57
SMC1A-206ENST00000470241 NFICP08651 508 aa11.46□□□□□ -0.57
SMC1A-206ENST00000470241 CCDC192P0DO97 292 aa11.46□□□□□ -0.57
SMC1A-206ENST00000470241 PSMC2P35998 433 aaKnown RBP11.46□□□□□ -0.57
SMC1A-206ENST00000470241 TAP1Q03518 808 aa11.46□□□□□ -0.57
SMC1A-206ENST00000470241 SOX4Q06945 474 aaPredicted RBP11.46□□□□□ -0.57
SMC1A-206ENST00000470241 HSP90AA2PQ14568 343 aaPredicted RBP11.46□□□□□ -0.57
SMC1A-206ENST00000470241 PSMD6Q15008 389 aa11.46□□□□□ -0.57
SMC1A-206ENST00000470241 JADE1Q6IE81 842 aa11.46□□□□□ -0.57
SMC1A-206ENST00000470241 SPRED2Q7Z698 418 aa11.46□□□□□ -0.57
SMC1A-206ENST00000470241 EFCAB13Q8IY85 973 aa11.46□□□□□ -0.57
SMC1A-206ENST00000470241 COLGALT2Q8IYK4 626 aa11.46□□□□□ -0.57
SMC1A-206ENST00000470241 FAM186BQ8IYM0 893 aa11.46□□□□□ -0.57
SMC1A-206ENST00000470241 TMEM130Q8N3G9 435 aa11.46□□□□□ -0.57
SMC1A-206ENST00000470241 CSGALNACT2Q8N6G5 542 aa11.46□□□□□ -0.57
SMC1A-206ENST00000470241 CLP1Q92989 425 aaKnown RBP11.46□□□□□ -0.57
SMC1A-206ENST00000470241 C18orf25Q96B23 403 aaPredicted RBP11.46□□□□□ -0.57
SMC1A-206ENST00000470241 CCDC127Q96BQ5 260 aa11.46□□□□□ -0.57
SMC1A-206ENST00000470241 BORCS6Q96GS4 357 aa11.46□□□□□ -0.57
SMC1A-206ENST00000470241 FAM84AQ96KN4 292 aa11.46□□□□□ -0.57
SMC1A-206ENST00000470241 CEP63Q96MT8 703 aa11.46□□□□□ -0.57
SMC1A-206ENST00000470241 MKNK1Q9BUB5 465 aa11.46□□□□□ -0.57
SMC1A-206ENST00000470241 DNAJC25Q9H1X3 360 aa11.46□□□□□ -0.57
SMC1A-206ENST00000470241 PDE11AQ9HCR9 933 aa11.46□□□□□ -0.57
SMC1A-206ENST00000470241 TUBGCP4Q9UGJ1 667 aa11.46□□□□□ -0.57
SMC1A-206ENST00000470241 MSRAQ9UJ68 235 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms