RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 TCEAL4Q96EI5 215 aa9.23□□□□□ -0.93
LSM2-210ENST00000470086 MCRS1Q96EZ8 462 aa9.23□□□□□ -0.93
LSM2-210ENST00000470086 CLSTN3Q9BQT9 956 aa9.23□□□□□ -0.93
LSM2-210ENST00000470086 CNNM2Q9H8M5 875 aa9.23□□□□□ -0.93
LSM2-210ENST00000470086 LMAN1LQ9HAT1 526 aa9.23□□□□□ -0.93
LSM2-210ENST00000470086 IFT122Q9HBG6 1241 aa9.23□□□□□ -0.93
LSM2-210ENST00000470086 DACT1Q9NYF0 836 aa9.23□□□□□ -0.93
LSM2-210ENST00000470086 PI4KAP42356 2102 aa9.23□□□□□ -0.93
LSM2-210ENST00000470086 ATMQ13315 3056 aa9.22□□□□□ -0.93
LSM2-210ENST00000470086 IPO5O00410 1097 aaKnown RBP9.22□□□□□ -0.93
LSM2-210ENST00000470086 ZNF623O75123 536 aa9.22□□□□□ -0.93
LSM2-210ENST00000470086 PRB1P04280 392 aa9.22□□□□□ -0.93
LSM2-210ENST00000470086 ZNF806P0C7X5 589 aa9.22□□□□□ -0.93
LSM2-210ENST00000470086 HOXA11P31270 313 aaPredicted RBP9.22□□□□□ -0.93
LSM2-210ENST00000470086 RAP1GAPP47736 663 aa9.22□□□□□ -0.93
LSM2-210ENST00000470086 CCR3P51677 355 aa9.22□□□□□ -0.93
LSM2-210ENST00000470086 ANKRD45Q5TZF3 282 aa9.22□□□□□ -0.93
LSM2-210ENST00000470086 VITQ6UXI7 678 aa9.22□□□□□ -0.93
LSM2-210ENST00000470086 MRPL10Q7Z7H8 261 aaKnown RBP9.22□□□□□ -0.93
LSM2-210ENST00000470086 PLA2G4DQ86XP0 818 aa9.22□□□□□ -0.93
LSM2-210ENST00000470086 SLC7A14Q8TBB6 771 aa9.22□□□□□ -0.93
LSM2-210ENST00000470086 HDAC7Q8WUI4 952 aa9.22□□□□□ -0.93
LSM2-210ENST00000470086 DDX1Q92499 740 aaKnown RBP9.22□□□□□ -0.93
LSM2-210ENST00000470086 CRELD1Q96HD1 420 aa9.22□□□□□ -0.93
LSM2-210ENST00000470086 GAD1Q99259 594 aa9.22□□□□□ -0.93
LSM2-210ENST00000470086 PLEKHA4Q9H4M7 779 aa9.22□□□□□ -0.93
LSM2-210ENST00000470086 CHST12Q9NRB3 414 aa9.22□□□□□ -0.93
LSM2-210ENST00000470086 TSR3Q9UJK0 312 aaKnown RBP9.22□□□□□ -0.93
LSM2-210ENST00000470086 POLIQ9UNA4 740 aa9.22□□□□□ -0.93
LSM2-210ENST00000470086 GPSM3Q9Y4H4 160 aa9.22□□□□□ -0.93
LSM2-210ENST00000470086 TP53BP1Q12888 1972 aaPredicted RBP9.22□□□□□ -0.93
LSM2-210ENST00000470086 IGKV6-21A0A0C4DH24 114 aa9.21□□□□□ -0.94
LSM2-210ENST00000470086 ARL5CA6NH57 179 aa9.21□□□□□ -0.94
LSM2-210ENST00000470086 PCNX2A6NKB5 2137 aa9.21□□□□□ -0.94
LSM2-210ENST00000470086 E7EWF7 191 aa9.21□□□□□ -0.94
LSM2-210ENST00000470086 ECI2O75521 394 aa9.21□□□□□ -0.94
LSM2-210ENST00000470086 MPLP40238 635 aa9.21□□□□□ -0.94
LSM2-210ENST00000470086 NT5C2P49902 561 aa9.21□□□□□ -0.94
LSM2-210ENST00000470086 PFKPQ01813 784 aa9.21□□□□□ -0.94
LSM2-210ENST00000470086 TRAF1Q13077 416 aa9.21□□□□□ -0.94
LSM2-210ENST00000470086 COL28A1Q2UY09 1125 aa9.21□□□□□ -0.94
LSM2-210ENST00000470086 MTERF2Q49AM1 385 aa9.21□□□□□ -0.94
LSM2-210ENST00000470086 PRSS36Q5K4E3 855 aa9.21□□□□□ -0.94
LSM2-210ENST00000470086 SH3PXD2AQ5TCZ1 1133 aa9.21□□□□□ -0.94
LSM2-210ENST00000470086 PLA2G4FQ68DD2 849 aa9.21□□□□□ -0.94
LSM2-210ENST00000470086 LONP2Q86WA8 852 aa9.21□□□□□ -0.94
LSM2-210ENST00000470086 RHPN2Q8IUC4 686 aa9.21□□□□□ -0.94
LSM2-210ENST00000470086 GPIHBP1Q8IV16 184 aa9.21□□□□□ -0.94
LSM2-210ENST00000470086 MAP4K3Q8IVH8 894 aa9.21□□□□□ -0.94
LSM2-210ENST00000470086 URGCPQ8TCY9 931 aa9.21□□□□□ -0.94
LSM2-210ENST00000470086 DNASE1L2Q92874 299 aa9.21□□□□□ -0.94
LSM2-210ENST00000470086 TNPO1Q92973 898 aaKnown RBP9.21□□□□□ -0.94
LSM2-210ENST00000470086 NLRP4Q96MN2 994 aa9.21□□□□□ -0.94
LSM2-210ENST00000470086 EDEM2Q9BV94 578 aa9.21□□□□□ -0.94
LSM2-210ENST00000470086 LNPKQ9C0E8 428 aa9.21□□□□□ -0.94
LSM2-210ENST00000470086 NXF3Q9H4D5 531 aaKnown RBP9.21□□□□□ -0.94
LSM2-210ENST00000470086 FNIP2Q9P278 1114 aa9.21□□□□□ -0.94
LSM2-210ENST00000470086 SEC63Q9UGP8 760 aaKnown RBP9.21□□□□□ -0.94
LSM2-210ENST00000470086 IPPQ9Y573 584 aa9.21□□□□□ -0.94
LSM2-210ENST00000470086 ZFP37Q9Y6Q3 630 aaPredicted RBP9.21□□□□□ -0.94
LSM2-210ENST00000470086 PIAS3Q9Y6X2 628 aa9.21□□□□□ -0.94
LSM2-210ENST00000470086 LNP1A1A4G5 178 aa9.2□□□□□ -0.94
LSM2-210ENST00000470086 C4orf47A7E2U8 309 aa9.2□□□□□ -0.94
LSM2-210ENST00000470086 PATE3B3GLJ2 98 aa9.2□□□□□ -0.94
LSM2-210ENST00000470086 CHMP2AO43633 222 aa9.2□□□□□ -0.94
LSM2-210ENST00000470086 EXTL3O43909 919 aa9.2□□□□□ -0.94
LSM2-210ENST00000470086 MOSPD3O75425 235 aa9.2□□□□□ -0.94
LSM2-210ENST00000470086 C1QL1O75973 258 aa9.2□□□□□ -0.94
LSM2-210ENST00000470086 DDAH1O94760 285 aa9.2□□□□□ -0.94
LSM2-210ENST00000470086 KIF4AO95239 1232 aa9.2□□□□□ -0.94
LSM2-210ENST00000470086 ALDH2P05091 517 aa9.2□□□□□ -0.94
LSM2-210ENST00000470086 SFPQP23246 707 aaKnown RBP eCLIP9.2□□□□□ -0.94
LSM2-210ENST00000470086 CCNE1P24864 410 aa9.2□□□□□ -0.94
LSM2-210ENST00000470086 RAB27AP51159 221 aa9.2□□□□□ -0.94
LSM2-210ENST00000470086 PABPC1LQ4VXU2 614 aaKnown RBP9.2□□□□□ -0.94
LSM2-210ENST00000470086 FAM78AQ5JUQ0 283 aa9.2□□□□□ -0.94
LSM2-210ENST00000470086 PPM1LQ5SGD2 360 aa9.2□□□□□ -0.94
LSM2-210ENST00000470086 RNF43Q68DV7 783 aa9.2□□□□□ -0.94
LSM2-210ENST00000470086 FAM43BQ6ZT52 329 aaPredicted RBP9.2□□□□□ -0.94
LSM2-210ENST00000470086 TMTC3Q6ZXV5 915 aa9.2□□□□□ -0.94
LSM2-210ENST00000470086 CATSPER4Q7RTX7 472 aa9.2□□□□□ -0.94
LSM2-210ENST00000470086 PDZD3Q86UT5 571 aa9.2□□□□□ -0.94
LSM2-210ENST00000470086 WDR5BQ86VZ2 330 aa9.2□□□□□ -0.94
LSM2-210ENST00000470086 CDR2LQ86X02 465 aaPredicted RBP9.2□□□□□ -0.94
LSM2-210ENST00000470086 C12orf50Q8NA57 414 aaPredicted RBP9.2□□□□□ -0.94
LSM2-210ENST00000470086 LNX1Q8TBB1 728 aaPredicted RBP9.2□□□□□ -0.94
LSM2-210ENST00000470086 FAM3CQ92520 227 aa9.2□□□□□ -0.94
LSM2-210ENST00000470086 CPB2Q96IY4 423 aa9.2□□□□□ -0.94
LSM2-210ENST00000470086 ZSWIM3Q96MP5 696 aa9.2□□□□□ -0.94
LSM2-210ENST00000470086 ZNF334Q9HCZ1 680 aaPredicted RBP9.2□□□□□ -0.94
LSM2-210ENST00000470086 RIC8AQ9NPQ8 531 aa9.2□□□□□ -0.94
LSM2-210ENST00000470086 CITO14578 2027 aa9.2□□□□□ -0.94
LSM2-210ENST00000470086 COL5A1P20908 1838 aaPredicted RBP9.19□□□□□ -0.94
LSM2-210ENST00000470086 TMEM8BA6NDV4 472 aa9.19□□□□□ -0.94
LSM2-210ENST00000470086 SH2B2O14492 632 aaPredicted RBP9.19□□□□□ -0.94
LSM2-210ENST00000470086 MAGEB2O15479 319 aa9.19□□□□□ -0.94
LSM2-210ENST00000470086 PAPSS2O95340 614 aaPredicted RBP9.19□□□□□ -0.94
LSM2-210ENST00000470086 RHOP08100 348 aa9.19□□□□□ -0.94
LSM2-210ENST00000470086 VIPR2P41587 438 aa9.19□□□□□ -0.94
LSM2-210ENST00000470086 CXCL12P48061 93 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms