RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 PTGDRQ13258 359 aa13.38□□□□□ -0.27
LSM2-209ENST00000470083 RAB33AQ14088 237 aa13.38□□□□□ -0.27
LSM2-209ENST00000470083 PFKFB3Q16875 520 aaPredicted RBP13.38□□□□□ -0.27
LSM2-209ENST00000470083 FAM171A1Q5VUB5 890 aa13.38□□□□□ -0.27
LSM2-209ENST00000470083 PLA2G4FQ68DD2 849 aa13.38□□□□□ -0.27
LSM2-209ENST00000470083 HEATR6Q6AI08 1181 aaKnown RBP13.38□□□□□ -0.27
LSM2-209ENST00000470083 PDXDC1Q6P996 788 aa13.38□□□□□ -0.27
LSM2-209ENST00000470083 B3GNT9Q6UX72 402 aa13.38□□□□□ -0.27
LSM2-209ENST00000470083 CEP57Q86XR8 500 aa13.38□□□□□ -0.27
LSM2-209ENST00000470083 GJA10Q969M2 543 aa13.38□□□□□ -0.27
LSM2-209ENST00000470083 CCDC136Q96JN2 1154 aa13.38□□□□□ -0.27
LSM2-209ENST00000470083 APOL6Q9BWW8 343 aa13.38□□□□□ -0.27
LSM2-209ENST00000470083 ADAM33Q9BZ11 813 aa13.38□□□□□ -0.27
LSM2-209ENST00000470083 CSRNP2Q9H175 543 aa13.38□□□□□ -0.27
LSM2-209ENST00000470083 ARRDC1-AS1Q9H2J1 176 aa13.38□□□□□ -0.27
LSM2-209ENST00000470083 NXF3Q9H4D5 531 aaKnown RBP13.38□□□□□ -0.27
LSM2-209ENST00000470083 ZFP14Q9HCL3 533 aa13.38□□□□□ -0.27
LSM2-209ENST00000470083 ZNF334Q9HCZ1 680 aaPredicted RBP13.38□□□□□ -0.27
LSM2-209ENST00000470083 LHX6Q9UPM6 363 aa13.38□□□□□ -0.27
LSM2-209ENST00000470083 LOC400499M0QZD8 3231 aa13.37□□□□□ -0.27
LSM2-209ENST00000470083 NBEAQ8NFP9 2946 aa13.37□□□□□ -0.27
LSM2-209ENST00000470083 AXIN1O15169 862 aa13.37□□□□□ -0.27
LSM2-209ENST00000470083 EDIL3O43854 480 aa13.37□□□□□ -0.27
LSM2-209ENST00000470083 EPN2O95208 641 aa13.37□□□□□ -0.27
LSM2-209ENST00000470083 LRRC32Q14392 662 aa13.37□□□□□ -0.27
LSM2-209ENST00000470083 CCDC6Q16204 474 aa13.37□□□□□ -0.27
LSM2-209ENST00000470083 FAM78AQ5JUQ0 283 aa13.37□□□□□ -0.27
LSM2-209ENST00000470083 WDR5BQ86VZ2 330 aa13.37□□□□□ -0.27
LSM2-209ENST00000470083 EXOC8Q8IYI6 725 aa13.37□□□□□ -0.27
LSM2-209ENST00000470083 RNF149Q8NC42 400 aa13.37□□□□□ -0.27
LSM2-209ENST00000470083 HASPINQ8TF76 798 aa13.37□□□□□ -0.27
LSM2-209ENST00000470083 CCDC12Q8WUD4 166 aaPredicted RBP13.37□□□□□ -0.27
LSM2-209ENST00000470083 TMEM143Q96AN5 459 aa13.37□□□□□ -0.27
LSM2-209ENST00000470083 PAAF1Q9BRP4 392 aa13.37□□□□□ -0.27
LSM2-209ENST00000470083 TRIM6Q9C030 488 aaPredicted RBP13.37□□□□□ -0.27
LSM2-209ENST00000470083 DHX33Q9H6R0 707 aaKnown RBP13.37□□□□□ -0.27
LSM2-209ENST00000470083 CACNG4Q9UBN1 327 aa13.37□□□□□ -0.27
LSM2-209ENST00000470083 PPME1Q9Y570 386 aa13.37□□□□□ -0.27
LSM2-209ENST00000470083 SDK1Q7Z5N4 2213 aa13.36□□□□□ -0.27
LSM2-209ENST00000470083 ZBTB43O43298 467 aa13.36□□□□□ -0.27
LSM2-209ENST00000470083 KIF4AO95239 1232 aa13.36□□□□□ -0.27
LSM2-209ENST00000470083 PSMC3P17980 439 aa13.36□□□□□ -0.27
LSM2-209ENST00000470083 AKAP5P24588 427 aa13.36□□□□□ -0.27
LSM2-209ENST00000470083 CCNE1P24864 410 aa13.36□□□□□ -0.27
LSM2-209ENST00000470083 GNA11P29992 359 aa13.36□□□□□ -0.27
LSM2-209ENST00000470083 GDI1P31150 447 aa13.36□□□□□ -0.27
LSM2-209ENST00000470083 RAP1GAPP47736 663 aa13.36□□□□□ -0.27
LSM2-209ENST00000470083 NOVA1P51513 510 aaKnown RBP13.36□□□□□ -0.27
LSM2-209ENST00000470083 USP11P51784 963 aa13.36□□□□□ -0.27
LSM2-209ENST00000470083 MLLT6P55198 1093 aaPredicted RBP13.36□□□□□ -0.27
LSM2-209ENST00000470083 NPEPPSP55786 919 aa13.36□□□□□ -0.27
LSM2-209ENST00000470083 PSMC5P62195 406 aa13.36□□□□□ -0.27
LSM2-209ENST00000470083 NCBP1Q09161 790 aaKnown RBP13.36□□□□□ -0.27
LSM2-209ENST00000470083 ELAVL2Q12926 359 aaKnown RBP13.36□□□□□ -0.27
LSM2-209ENST00000470083 TUSC3Q13454 348 aa13.36□□□□□ -0.27
LSM2-209ENST00000470083 PLA2G2CQ5R387 149 aa13.36□□□□□ -0.27
LSM2-209ENST00000470083 TTC22Q5TAA0 569 aa13.36□□□□□ -0.27
LSM2-209ENST00000470083 C1orf228Q6PIY5 440 aa13.36□□□□□ -0.27
LSM2-209ENST00000470083 GATA6Q92908 595 aa13.36□□□□□ -0.27
LSM2-209ENST00000470083 MSANTD3Q96H12 275 aa13.36□□□□□ -0.27
LSM2-209ENST00000470083 CPB2Q96IY4 423 aa13.36□□□□□ -0.27
LSM2-209ENST00000470083 ASB16Q96NS5 453 aa13.36□□□□□ -0.27
LSM2-209ENST00000470083 PCDHGA5Q9Y5G8 931 aa13.36□□□□□ -0.27
LSM2-209ENST00000470083 GCN1Q92616 2671 aaKnown RBP13.36□□□□□ -0.27
LSM2-209ENST00000470083 FREM2Q5SZK8 3169 aa13.35□□□□□ -0.27
LSM2-209ENST00000470083 ASAP2O43150 1006 aa13.35□□□□□ -0.27
LSM2-209ENST00000470083 MICAL2O94851 1124 aa13.35□□□□□ -0.27
LSM2-209ENST00000470083 OR1D2P34982 312 aa13.35□□□□□ -0.27
LSM2-209ENST00000470083 RFC5P40937 340 aa13.35□□□□□ -0.27
LSM2-209ENST00000470083 PTENP60484 403 aa13.35□□□□□ -0.27
LSM2-209ENST00000470083 ZNF252P-AS1Q0IIN9 211 aa13.35□□□□□ -0.27
LSM2-209ENST00000470083 FOXC1Q12948 553 aa13.35□□□□□ -0.27
LSM2-209ENST00000470083 AAMPQ13685 434 aa13.35□□□□□ -0.27
LSM2-209ENST00000470083 PRSS36Q5K4E3 855 aa13.35□□□□□ -0.27
LSM2-209ENST00000470083 RNF43Q68DV7 783 aa13.35□□□□□ -0.27
LSM2-209ENST00000470083 VITQ6UXI7 678 aa13.35□□□□□ -0.27
LSM2-209ENST00000470083 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.35□□□□□ -0.27
LSM2-209ENST00000470083 Q6ZS52 159 aa13.35□□□□□ -0.27
LSM2-209ENST00000470083 CACNA2D4Q7Z3S7 1137 aa13.35□□□□□ -0.27
LSM2-209ENST00000470083 FERMT3Q86UX7 667 aa13.35□□□□□ -0.27
LSM2-209ENST00000470083 BICD2Q8TD16 824 aa13.35□□□□□ -0.27
LSM2-209ENST00000470083 DEPDC1BQ8WUY9 529 aa13.35□□□□□ -0.27
LSM2-209ENST00000470083 CEP170P1Q96L14 293 aa13.35□□□□□ -0.27
LSM2-209ENST00000470083 RBM12Q9NTZ6 932 aaKnown RBP13.35□□□□□ -0.27
LSM2-209ENST00000470083 NOTCH4Q99466 2003 aa13.35□□□□□ -0.27
LSM2-209ENST00000470083 ARHGEF37A1IGU5 675 aa13.34□□□□□ -0.27
LSM2-209ENST00000470083 CASTOR2A6NHX0 329 aa13.34□□□□□ -0.27
LSM2-209ENST00000470083 GOLGA8AA7E2F4 631 aa13.34□□□□□ -0.27
LSM2-209ENST00000470083 GOLGA8BA8MQT2 603 aa13.34□□□□□ -0.27
LSM2-209ENST00000470083 TAF4O00268 1085 aa13.34□□□□□ -0.27
LSM2-209ENST00000470083 ARNTLO00327 626 aa13.34□□□□□ -0.27
LSM2-209ENST00000470083 NRG2O14511 850 aaPredicted RBP13.34□□□□□ -0.27
LSM2-209ENST00000470083 SLC27A2O14975 620 aa13.34□□□□□ -0.27
LSM2-209ENST00000470083 IGHDP01880 384 aa13.34□□□□□ -0.27
LSM2-209ENST00000470083 PTPN2P17706 415 aa13.34□□□□□ -0.27
LSM2-209ENST00000470083 SPINK2P20155 84 aa13.34□□□□□ -0.27
LSM2-209ENST00000470083 CDC27P30260 824 aa13.34□□□□□ -0.27
LSM2-209ENST00000470083 AMHR2Q16671 573 aa13.34□□□□□ -0.27
LSM2-209ENST00000470083 Q4G0T1 1027 aa13.34□□□□□ -0.27
LSM2-209ENST00000470083 ZNF579Q8NAF0 562 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms