RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 CYP3A5P20815 502 aa13.73□□□□□ -0.21
SPTLC1-204ENST00000469778 CCNE1P24864 410 aa13.73□□□□□ -0.21
SPTLC1-204ENST00000469778 ERCC5P28715 1186 aaPredicted RBP13.73□□□□□ -0.21
SPTLC1-204ENST00000469778 RPL9P32969 192 aaKnown RBP13.73□□□□□ -0.21
SPTLC1-204ENST00000469778 BMPR1AP36894 532 aa13.73□□□□□ -0.21
SPTLC1-204ENST00000469778 MLH1P40692 756 aa13.73□□□□□ -0.21
SPTLC1-204ENST00000469778 NLRP12P59046 1061 aa13.73□□□□□ -0.21
SPTLC1-204ENST00000469778 ENOX2Q16206 610 aaKnown RBP13.73□□□□□ -0.21
SPTLC1-204ENST00000469778 ZCWPW2Q504Y3 356 aa13.73□□□□□ -0.21
SPTLC1-204ENST00000469778 PPP2R2DQ66LE6 453 aa13.73□□□□□ -0.21
SPTLC1-204ENST00000469778 TMCO2Q7Z6W1 182 aaPredicted RBP13.73□□□□□ -0.21
SPTLC1-204ENST00000469778 CACTINQ8WUQ7 758 aaKnown RBP13.73□□□□□ -0.21
SPTLC1-204ENST00000469778 ERCC4Q92889 916 aaPredicted RBP13.73□□□□□ -0.21
SPTLC1-204ENST00000469778 SNX27Q96L92 541 aa13.73□□□□□ -0.21
SPTLC1-204ENST00000469778 CBWD1Q9BRT8 395 aa13.73□□□□□ -0.21
SPTLC1-204ENST00000469778 MKNK1Q9BUB5 465 aa13.73□□□□□ -0.21
SPTLC1-204ENST00000469778 MEIS3P2A8K0S8 358 aa13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 BIN1O00499 593 aa13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 IBSPP21815 317 aaPredicted RBP13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 BMP6P22004 513 aa13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 ACOT2P49753 483 aa13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 AP3M2P53677 418 aa13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 MCCD1P59942 119 aaPredicted RBP13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 OSTNP61366 133 aa13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 TAP1Q03518 808 aa13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 UBE3AQ05086 875 aa13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 DSC1Q08554 894 aa13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 ADAM9Q13443 819 aa13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 TUSC3Q13454 348 aa13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 SNRNP35Q16560 246 aaKnown RBP13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 CRELD2Q6UXH1 353 aaPredicted RBP13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 BRSK2Q8IWQ3 736 aa13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 TMEM192Q8IY95 271 aa13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 MFSD14AQ96MC6 490 aa13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 ZFP42Q96MM3 310 aa13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 CEP63Q96MT8 703 aa13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 ZNF558Q96NG5 402 aa13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 C11orf84Q9BUA3 381 aaPredicted RBP13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 COLEC11Q9BWP8 271 aa13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 SEMA6BQ9H3T3 888 aa13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 ANO10Q9NW15 660 aa13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 RBAKQ9NYW8 714 aaPredicted RBP13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 RWDD2AQ9UIY3 292 aa13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 UBQLN1Q9UMX0 589 aaKnown RBP13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 MAPK8IP1Q9UQF2 711 aa13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 INPP5FQ9Y2H2 1132 aa13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 YBX2Q9Y2T7 364 aaKnown RBP13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 MRPL42Q9Y6G3 142 aaKnown RBP13.72□□□□□ -0.21
SPTLC1-204ENST00000469778 TRIOBPQ9H2D6 2365 aa13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 LACTBL1A8MY62 500 aa13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 TISP43B9A030 160 aa13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 PTGESO14684 152 aa13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 CAVIN2O95810 425 aa13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 GNA14O95837 355 aa13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 POMCP01189 267 aa13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 NR2F2P24468 414 aa13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 PSMC2P35998 433 aaKnown RBP13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 PBX2P40425 430 aa13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 SCNN1GP51170 649 aa13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 PLCB3Q01970 1234 aa13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 KRT17Q04695 432 aa13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 PAK1Q13153 545 aa13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 BMS1Q14692 1282 aaKnown RBP13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 ZBTB6Q15916 424 aa13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 PAN2Q504Q3 1202 aaKnown RBP13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 SPOUT1Q5T280 376 aaKnown RBP13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 LRRC55Q6ZSA7 311 aa13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 INTS8Q75QN2 995 aaKnown RBP13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 SMYD4Q8IYR2 804 aaPredicted RBP13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 CEP120Q8N960 986 aa13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 PPP1R10Q96QC0 940 aaKnown RBP13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 NAT10Q9H0A0 1025 aaKnown RBP13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 PCIF1Q9H4Z3 704 aa13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 ZNF576Q9H609 170 aa13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 CWH43Q9H720 699 aa13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 SPG21Q9NZD8 308 aa13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 KLK14Q9P0G3 267 aa13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 PUF60Q9UHX1 559 aaKnown RBP13.71□□□□□ -0.21
SPTLC1-204ENST00000469778 LCHNA4D1U4 455 aa13.7□□□□□ -0.22
SPTLC1-204ENST00000469778 IKBKBO14920 756 aa13.7□□□□□ -0.22
SPTLC1-204ENST00000469778 CLIC2O15247 247 aa13.7□□□□□ -0.22
SPTLC1-204ENST00000469778 CXCL8P10145 99 aa13.7□□□□□ -0.22
SPTLC1-204ENST00000469778 MYOGP15173 224 aa13.7□□□□□ -0.22
SPTLC1-204ENST00000469778 TNFSF9P41273 254 aa13.7□□□□□ -0.22
SPTLC1-204ENST00000469778 GATMP50440 423 aa13.7□□□□□ -0.22
SPTLC1-204ENST00000469778 CYP2J2P51589 502 aa13.7□□□□□ -0.22
SPTLC1-204ENST00000469778 BCAR1P56945 870 aa13.7□□□□□ -0.22
SPTLC1-204ENST00000469778 CLDN10P78369 228 aa13.7□□□□□ -0.22
SPTLC1-204ENST00000469778 PSMD6Q15008 389 aa13.7□□□□□ -0.22
SPTLC1-204ENST00000469778 NFKBIBQ15653 356 aa13.7□□□□□ -0.22
SPTLC1-204ENST00000469778 DUOXA2Q1HG44 320 aa13.7□□□□□ -0.22
SPTLC1-204ENST00000469778 EPC2Q52LR7 807 aa13.7□□□□□ -0.22
SPTLC1-204ENST00000469778 ZNF697Q5TEC3 545 aa13.7□□□□□ -0.22
SPTLC1-204ENST00000469778 ANKRD40Q6AI12 368 aa13.7□□□□□ -0.22
SPTLC1-204ENST00000469778 ISM2Q6H9L7 571 aa13.7□□□□□ -0.22
SPTLC1-204ENST00000469778 PDE12Q6L8Q7 609 aaKnown RBP13.7□□□□□ -0.22
SPTLC1-204ENST00000469778 CAVIN1Q6NZI2 390 aaKnown RBP13.7□□□□□ -0.22
SPTLC1-204ENST00000469778 DCLRE1AQ6PJP8 1040 aa13.7□□□□□ -0.22
SPTLC1-204ENST00000469778 KCNT2Q6UVM3 1135 aa13.7□□□□□ -0.22
SPTLC1-204ENST00000469778 FILIP1Q7Z7B0 1213 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms