RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 MALP21145 153 aa5.24□□□□□ -1.57
VPS8-220ENST00000469713 IL12RB1P42701 662 aa5.24□□□□□ -1.57
VPS8-220ENST00000469713 FLT3LGP49771 235 aa5.24□□□□□ -1.57
VPS8-220ENST00000469713 CTXN1P60606 82 aa5.24□□□□□ -1.57
VPS8-220ENST00000469713 SNAPC2Q13487 334 aa5.24□□□□□ -1.57
VPS8-220ENST00000469713 SURF1Q15526 300 aa5.24□□□□□ -1.57
VPS8-220ENST00000469713 FBLN7Q53RD9 439 aa5.24□□□□□ -1.57
VPS8-220ENST00000469713 AFMIDQ63HM1 303 aa5.24□□□□□ -1.57
VPS8-220ENST00000469713 SRGAP1Q7Z6B7 1085 aa5.24□□□□□ -1.57
VPS8-220ENST00000469713 COL23A1Q86Y22 540 aaPredicted RBP5.24□□□□□ -1.57
VPS8-220ENST00000469713 KIAA0319LQ8IZA0 1049 aa5.24□□□□□ -1.57
VPS8-220ENST00000469713 SH2D3CQ8N5H7 860 aa5.24□□□□□ -1.57
VPS8-220ENST00000469713 DCBLD1Q8N8Z6 715 aa5.24□□□□□ -1.57
VPS8-220ENST00000469713 FAM156AQ8NDB6 213 aa5.24□□□□□ -1.57
VPS8-220ENST00000469713 CDK5RAP3Q96JB5 506 aa5.24□□□□□ -1.57
VPS8-220ENST00000469713 SARGQ9BW04 601 aa5.24□□□□□ -1.57
VPS8-220ENST00000469713 EPC1Q9H2F5 836 aa5.24□□□□□ -1.57
VPS8-220ENST00000469713 ARMT1Q9H993 441 aa5.24□□□□□ -1.57
VPS8-220ENST00000469713 MAN1C1Q9NR34 630 aa5.24□□□□□ -1.57
VPS8-220ENST00000469713 LMBRD1Q9NUN5 540 aa5.24□□□□□ -1.57
VPS8-220ENST00000469713 CALCOCO1Q9P1Z2 691 aa5.24□□□□□ -1.57
VPS8-220ENST00000469713 FAM50BQ9Y247 325 aa5.24□□□□□ -1.57
VPS8-220ENST00000469713 POLHQ9Y253 713 aa5.24□□□□□ -1.57
VPS8-220ENST00000469713 HOXA3O43365 443 aaPredicted RBP5.23□□□□□ -1.57
VPS8-220ENST00000469713 ZBED1O96006 694 aa5.23□□□□□ -1.57
VPS8-220ENST00000469713 RHCEP18577 417 aa5.23□□□□□ -1.57
VPS8-220ENST00000469713 AGFG1P52594 562 aaKnown RBP5.23□□□□□ -1.57
VPS8-220ENST00000469713 PURAQ00577 322 aaKnown RBP5.23□□□□□ -1.57
VPS8-220ENST00000469713 RHDQ02161 417 aa5.23□□□□□ -1.57
VPS8-220ENST00000469713 ANO6Q4KMQ2 910 aa5.23□□□□□ -1.57
VPS8-220ENST00000469713 COBLL1Q53SF7 1204 aa5.23□□□□□ -1.57
VPS8-220ENST00000469713 FAM47AQ5JRC9 791 aa5.23□□□□□ -1.57
VPS8-220ENST00000469713 SLFN13Q68D06 897 aa5.23□□□□□ -1.57
VPS8-220ENST00000469713 ANKS6Q68DC2 871 aa5.23□□□□□ -1.57
VPS8-220ENST00000469713 FAM111BQ6SJ93 734 aa5.23□□□□□ -1.57
VPS8-220ENST00000469713 SPOCD1Q6ZMY3 1216 aa5.23□□□□□ -1.57
VPS8-220ENST00000469713 CCDC149Q6ZUS6 474 aa5.23□□□□□ -1.57
VPS8-220ENST00000469713 DAAM2Q86T65 1068 aa5.23□□□□□ -1.57
VPS8-220ENST00000469713 GIMAP8Q8ND71 665 aaPredicted RBP5.23□□□□□ -1.57
VPS8-220ENST00000469713 SLC35B2Q8TB61 432 aa5.23□□□□□ -1.57
VPS8-220ENST00000469713 TTC17Q96AE7 1141 aa5.23□□□□□ -1.57
VPS8-220ENST00000469713 OR14A2Q96R54 314 aa5.23□□□□□ -1.57
VPS8-220ENST00000469713 MYOCQ99972 504 aa5.23□□□□□ -1.57
VPS8-220ENST00000469713 XYLT2Q9H1B5 865 aa5.23□□□□□ -1.57
VPS8-220ENST00000469713 ADAM7Q9H2U9 754 aa5.23□□□□□ -1.57
VPS8-220ENST00000469713 DDX21Q9NR30 783 aaKnown RBP eCLIP5.23□□□□□ -1.57
VPS8-220ENST00000469713 MOCS1Q9NZB8 636 aa5.23□□□□□ -1.57
VPS8-220ENST00000469713 PPP4R1LQ9P1A2 415 aa5.23□□□□□ -1.57
VPS8-220ENST00000469713 ABCF2Q9UG63 623 aa5.23□□□□□ -1.57
VPS8-220ENST00000469713 STAP2Q9UGK3 403 aa5.23□□□□□ -1.57
VPS8-220ENST00000469713 ZNF536O15090 1300 aa5.23□□□□□ -1.57
VPS8-220ENST00000469713 CXorf49A8MYA2 514 aaPredicted RBP5.22□□□□□ -1.57
VPS8-220ENST00000469713 NT5C1B-RDH14C9J2C7 533 aa5.22□□□□□ -1.57
VPS8-220ENST00000469713 H3BUI4 141 aa5.22□□□□□ -1.57
VPS8-220ENST00000469713 APAF1O14727 1248 aa5.22□□□□□ -1.57
VPS8-220ENST00000469713 ARIH2O95376 493 aa5.22□□□□□ -1.57
VPS8-220ENST00000469713 HRGP04196 525 aa5.22□□□□□ -1.57
VPS8-220ENST00000469713 TYRP14679 529 aa5.22□□□□□ -1.57
VPS8-220ENST00000469713 SMARCA1P28370 1054 aa5.22□□□□□ -1.57
VPS8-220ENST00000469713 RAB1AP62820 205 aa5.22□□□□□ -1.57
VPS8-220ENST00000469713 NKX6-1P78426 367 aaPredicted RBP5.22□□□□□ -1.57
VPS8-220ENST00000469713 PLS1Q14651 629 aa5.22□□□□□ -1.57
VPS8-220ENST00000469713 TBC1D10BQ4KMP7 808 aaPredicted RBP5.22□□□□□ -1.57
VPS8-220ENST00000469713 PPP4R4Q6NUP7 873 aa5.22□□□□□ -1.57
VPS8-220ENST00000469713 SWSAP1Q6NVH7 229 aa5.22□□□□□ -1.57
VPS8-220ENST00000469713 XYLT1Q86Y38 959 aa5.22□□□□□ -1.57
VPS8-220ENST00000469713 PLXDC1Q8IUK5 500 aa5.22□□□□□ -1.57
VPS8-220ENST00000469713 FAM43AQ8N2R8 423 aa5.22□□□□□ -1.57
VPS8-220ENST00000469713 SLC35A4Q96G79 324 aa5.22□□□□□ -1.57
VPS8-220ENST00000469713 ZNF512Q96ME7 567 aaPredicted RBP5.22□□□□□ -1.57
VPS8-220ENST00000469713 NT5C1BQ96P26 610 aa5.22□□□□□ -1.57
VPS8-220ENST00000469713 PCGF6Q9BYE7 350 aa5.22□□□□□ -1.57
VPS8-220ENST00000469713 C11orf54Q9H0W9 315 aaPredicted RBP5.22□□□□□ -1.57
VPS8-220ENST00000469713 NELFAQ9H3P2 528 aa5.22□□□□□ -1.57
VPS8-220ENST00000469713 ZCCHC4Q9H5U6 513 aa5.22□□□□□ -1.57
VPS8-220ENST00000469713 MSL2Q9HCI7 577 aa5.22□□□□□ -1.57
VPS8-220ENST00000469713 CHST12Q9NRB3 414 aa5.22□□□□□ -1.57
VPS8-220ENST00000469713 PNPOQ9NVS9 261 aa5.22□□□□□ -1.57
VPS8-220ENST00000469713 SLC23A1Q9UHI7 598 aa5.22□□□□□ -1.57
VPS8-220ENST00000469713 L1RE1Q9UN81 338 aa5.22□□□□□ -1.57
VPS8-220ENST00000469713 A0A088AWK7 358 aa5.21□□□□□ -1.58
VPS8-220ENST00000469713 NPEPPSL1A6NEC2 478 aa5.21□□□□□ -1.58
VPS8-220ENST00000469713 CAPN8A6NHC0 703 aa5.21□□□□□ -1.58
VPS8-220ENST00000469713 F2RL2O00254 374 aa5.21□□□□□ -1.58
VPS8-220ENST00000469713 TEX33O43247 280 aa5.21□□□□□ -1.58
VPS8-220ENST00000469713 PLIN1O60240 522 aa5.21□□□□□ -1.58
VPS8-220ENST00000469713 CD1AP06126 327 aa5.21□□□□□ -1.58
VPS8-220ENST00000469713 ATP5JP18859 108 aa5.21□□□□□ -1.58
VPS8-220ENST00000469713 RPS19P39019 145 aaKnown RBP5.21□□□□□ -1.58
VPS8-220ENST00000469713 PTH1RQ03431 593 aa5.21□□□□□ -1.58
VPS8-220ENST00000469713 GRM7Q14831 915 aa5.21□□□□□ -1.58
VPS8-220ENST00000469713 CNN3Q15417 329 aaKnown RBP5.21□□□□□ -1.58
VPS8-220ENST00000469713 KIAA0753Q2KHM9 967 aa5.21□□□□□ -1.58
VPS8-220ENST00000469713 FLYWCH1Q4VC44 716 aa5.21□□□□□ -1.58
VPS8-220ENST00000469713 FKBP15Q5T1M5 1219 aa5.21□□□□□ -1.58
VPS8-220ENST00000469713 OTUD7BQ6GQQ9 843 aa5.21□□□□□ -1.58
VPS8-220ENST00000469713 TCTN3Q6NUS6 607 aa5.21□□□□□ -1.58
VPS8-220ENST00000469713 FRMD5Q7Z6J6 570 aa5.21□□□□□ -1.58
VPS8-220ENST00000469713 SIAH1Q8IUQ4 282 aa5.21□□□□□ -1.58
VPS8-220ENST00000469713 PJA1Q8NG27 643 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms