RNA–Protein interactions for RNA: ENST00000469641.5

ATP13A1-205, Transcript of ATPase 13A1, human

TSL 2

Gene ATP13A1, Length 4,241 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP13A1-205	ENST00000469641	TTC17	Q96AE7	1141 aa		11.22	□□□□□ -0.61
ATP13A1-205	ENST00000469641	ERP27	Q96DN0	273 aa		11.22	□□□□□ -0.61
ATP13A1-205	ENST00000469641	CAMKK2	Q96RR4	588 aa		11.22	□□□□□ -0.61
ATP13A1-205	ENST00000469641	IFT122	Q9HBG6	1241 aa		11.22	□□□□□ -0.61
ATP13A1-205	ENST00000469641	SAYSD1	Q9NPB0	183 aa		11.22	□□□□□ -0.61
ATP13A1-205	ENST00000469641	CHORDC1	Q9UHD1	332 aa	Predicted RBP	11.22	□□□□□ -0.61
ATP13A1-205	ENST00000469641	PNMA3	Q9UL41	463 aa		11.22	□□□□□ -0.61
ATP13A1-205	ENST00000469641	SYNGAP1	Q96PV0	1343 aa		11.22	□□□□□ -0.61
ATP13A1-205	ENST00000469641	SYNJ2BP-COX16	A0A087WUM0	186 aa		11.22	□□□□□ -0.61
ATP13A1-205	ENST00000469641	FAM86B1	E9PN63	330 aa		11.22	□□□□□ -0.61
ATP13A1-205	ENST00000469641	FAM86B2	P0C5J1	330 aa		11.22	□□□□□ -0.61
ATP13A1-205	ENST00000469641	PLS3	P13797	630 aa		11.22	□□□□□ -0.61
ATP13A1-205	ENST00000469641	FECH	P22830	423 aa		11.22	□□□□□ -0.61
ATP13A1-205	ENST00000469641	CTCF	P49711	727 aa	Predicted RBP	11.22	□□□□□ -0.61
ATP13A1-205	ENST00000469641	HUNK	P57058	714 aa		11.22	□□□□□ -0.61
ATP13A1-205	ENST00000469641	DYNLT1	P63172	113 aa		11.22	□□□□□ -0.61
ATP13A1-205	ENST00000469641	PPP2R5C	Q13362	524 aa		11.22	□□□□□ -0.61
ATP13A1-205	ENST00000469641	PLCB4	Q15147	1175 aa		11.22	□□□□□ -0.61
ATP13A1-205	ENST00000469641	LONRF1	Q17RB8	773 aa		11.22	□□□□□ -0.61
ATP13A1-205	ENST00000469641	BBS9	Q3SYG4	887 aa		11.22	□□□□□ -0.61
ATP13A1-205	ENST00000469641	FAM160B1	Q5W0V3	765 aa		11.22	□□□□□ -0.61
ATP13A1-205	ENST00000469641	GLIS3	Q8NEA6	775 aa		11.22	□□□□□ -0.61
ATP13A1-205	ENST00000469641	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
ATP13A1-205	ENST00000469641	SUDS3	Q9H7L9	328 aa	Predicted RBP	11.22	□□□□□ -0.61
ATP13A1-205	ENST00000469641	COX16	Q9P0S2	106 aa		11.22	□□□□□ -0.61
ATP13A1-205	ENST00000469641	G3BP2	Q9UN86	482 aa	Known RBP	11.22	□□□□□ -0.61
ATP13A1-205	ENST00000469641	MAD1L1	Q9Y6D9	718 aa		11.22	□□□□□ -0.61
ATP13A1-205	ENST00000469641	KLRC4	O43908	158 aa		11.21	□□□□□ -0.61
ATP13A1-205	ENST00000469641	HAUS5	O94927	633 aa		11.21	□□□□□ -0.61
ATP13A1-205	ENST00000469641	MX2	P20592	715 aa		11.21	□□□□□ -0.61
ATP13A1-205	ENST00000469641	GRB10	Q13322	594 aa		11.21	□□□□□ -0.61
ATP13A1-205	ENST00000469641	CUL3	Q13618	768 aa		11.21	□□□□□ -0.61
ATP13A1-205	ENST00000469641	NXN	Q6DKJ4	435 aa		11.21	□□□□□ -0.61
ATP13A1-205	ENST00000469641	ZNF662	Q6ZS27	426 aa		11.21	□□□□□ -0.61
ATP13A1-205	ENST00000469641	LRRC71	Q8N4P6	559 aa		11.21	□□□□□ -0.61
ATP13A1-205	ENST00000469641	RFFL	Q8WZ73	363 aa		11.21	□□□□□ -0.61
ATP13A1-205	ENST00000469641	ATP2A3	Q93084	1043 aa		11.21	□□□□□ -0.61
ATP13A1-205	ENST00000469641	CAVIN3	Q969G5	261 aa		11.21	□□□□□ -0.61
ATP13A1-205	ENST00000469641	FAM161B	Q96MY7	647 aa		11.21	□□□□□ -0.61
ATP13A1-205	ENST00000469641	ACCS	Q96QU6	501 aa		11.21	□□□□□ -0.61
ATP13A1-205	ENST00000469641	ISCU	Q9H1K1	167 aa		11.21	□□□□□ -0.61
ATP13A1-205	ENST00000469641	TTC7A	Q9ULT0	858 aa	Predicted RBP	11.21	□□□□□ -0.61
ATP13A1-205	ENST00000469641	CELF2	O95319	508 aa	Known RBP	11.21	□□□□□ -0.61
ATP13A1-205	ENST00000469641	LMNA	P02545	664 aa	Known RBP	11.21	□□□□□ -0.61
ATP13A1-205	ENST00000469641	CYP2B6	P20813	491 aa		11.21	□□□□□ -0.61
ATP13A1-205	ENST00000469641	YWHAB	P31946	246 aa	Known RBP	11.21	□□□□□ -0.61
ATP13A1-205	ENST00000469641	BACE1	P56817	501 aa		11.21	□□□□□ -0.61
ATP13A1-205	ENST00000469641	KIAA0895	Q8NCT3	520 aa		11.21	□□□□□ -0.61
ATP13A1-205	ENST00000469641	SPATA33	Q96N06	139 aa		11.21	□□□□□ -0.61
ATP13A1-205	ENST00000469641	TRIM55	Q9BYV6	548 aa		11.21	□□□□□ -0.61
ATP13A1-205	ENST00000469641	ANAPC7	Q9UJX3	599 aa		11.21	□□□□□ -0.61
ATP13A1-205	ENST00000469641	GOLGB1	Q14789	3259 aa	Known RBP	11.21	□□□□□ -0.62
ATP13A1-205	ENST00000469641	TXN	P10599	105 aa	Known RBP	11.21	□□□□□ -0.62
ATP13A1-205	ENST00000469641	PIK3CA	P42336	1068 aa		11.21	□□□□□ -0.62
ATP13A1-205	ENST00000469641	KCNJ1	P48048	391 aa		11.21	□□□□□ -0.62
ATP13A1-205	ENST00000469641	ACOT2	P49753	483 aa		11.21	□□□□□ -0.62
ATP13A1-205	ENST00000469641	YARS	P54577	528 aa	Known RBP	11.21	□□□□□ -0.62
ATP13A1-205	ENST00000469641	DYNC1I2	Q13409	638 aa	Known RBP	11.21	□□□□□ -0.62
ATP13A1-205	ENST00000469641	KIAA1755	Q5JYT7	1200 aa		11.21	□□□□□ -0.62
ATP13A1-205	ENST00000469641	C7orf31	Q8N865	590 aa		11.21	□□□□□ -0.62
ATP13A1-205	ENST00000469641	SLC35G2	Q8TBE7	412 aa		11.21	□□□□□ -0.62
ATP13A1-205	ENST00000469641	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.21	□□□□□ -0.62
ATP13A1-205	ENST00000469641	TLR10	Q9BXR5	811 aa		11.21	□□□□□ -0.62
ATP13A1-205	ENST00000469641	IDI2	Q9BXS1	227 aa		11.21	□□□□□ -0.62
ATP13A1-205	ENST00000469641	SMYD3	Q9H7B4	428 aa		11.21	□□□□□ -0.62
ATP13A1-205	ENST00000469641	PCDHA10	Q9Y5I2	948 aa		11.21	□□□□□ -0.62
ATP13A1-205	ENST00000469641	MIF4GD	A9UHW6	222 aa	Known RBP	11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	HSPA9	P38646	679 aa	Known RBP	11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	GPC5	P78333	572 aa		11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	AGBL2	Q5U5Z8	902 aa		11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	GJB7	Q6PEY0	223 aa		11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	SH3BP5L	Q7L8J4	393 aa		11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	HAUS6	Q7Z4H7	955 aa		11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	PASD1	Q8IV76	773 aa		11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	TEKT4	Q8WW24	435 aa		11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	LPAR1	Q92633	364 aa		11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	DDX20	Q9UHI6	824 aa	Known RBP	11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	GRIN3B	O60391	1043 aa		11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	EPHB1	P54762	984 aa		11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	CNTN2	Q02246	1040 aa		11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	SLC29A2	Q14542	456 aa		11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	KLHDC7A	Q5VTJ3	777 aa		11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	C1orf146	Q5VVC0	180 aa		11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	ALG13	Q9NP73	1137 aa	Known RBP	11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	AGT	P01019	485 aa		11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	CYP2C8	P10632	490 aa		11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	RPS12	P25398	132 aa	Known RBP	11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	SERPINB4	P48594	390 aa		11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	DNAJC9	Q8WXX5	260 aa		11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	SYN2	Q92777	582 aa	Predicted RBP	11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	MMP19	Q99542	508 aa		11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	RUSC1	Q9BVN2	902 aa		11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	JPH1	Q9HDC5	661 aa	Predicted RBP	11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	ANLN	Q9NQW6	1124 aa		11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	CNOT8	Q9UFF9	292 aa	Known RBP	11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	NID2	Q14112	1375 aa		11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	TMEM120B	A0PK00	339 aa		11.2	□□□□□ -0.62
ATP13A1-205	ENST00000469641	GOLGA8S	H3BPF8	625 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms