RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 DHX37Q8IY37 1157 aaKnown RBP19.11■□□□□ 0.65
MCF2L-221ENST00000469415 CCT8L2Q96SF2 557 aa19.11■□□□□ 0.65
MCF2L-221ENST00000469415 GGA3Q9NZ52 723 aa19.11■□□□□ 0.65
MCF2L-221ENST00000469415 RGS17Q9UGC6 210 aaPredicted RBP19.11■□□□□ 0.65
MCF2L-221ENST00000469415 ASIC3Q9UHC3 531 aa19.11■□□□□ 0.65
MCF2L-221ENST00000469415 ZNF214Q9UL59 606 aaPredicted RBP19.11■□□□□ 0.65
MCF2L-221ENST00000469415 ERLIN2O94905 339 aa19.11■□□□□ 0.65
MCF2L-221ENST00000469415 PSAPP07602 524 aa19.11■□□□□ 0.65
MCF2L-221ENST00000469415 HP1BP3Q5SSJ5 553 aaPredicted RBP19.11■□□□□ 0.65
MCF2L-221ENST00000469415 KDM7AQ6ZMT4 941 aa19.11■□□□□ 0.65
MCF2L-221ENST00000469415 MGARPQ8TDB4 240 aa19.11■□□□□ 0.65
MCF2L-221ENST00000469415 IWS1Q96ST2 819 aa19.11■□□□□ 0.65
MCF2L-221ENST00000469415 TSPYL1Q9H0U9 437 aa19.11■□□□□ 0.65
MCF2L-221ENST00000469415 FBXO40Q9UH90 709 aa19.11■□□□□ 0.65
MCF2L-221ENST00000469415 PI4K2BG5E9Z4 385 aa19.1■□□□□ 0.65
MCF2L-221ENST00000469415 KIAA0391O15091 583 aaKnown RBP19.1■□□□□ 0.65
MCF2L-221ENST00000469415 SRGAP2CP0DJJ0 459 aa19.1■□□□□ 0.65
MCF2L-221ENST00000469415 IFI35P80217 286 aaPredicted RBP19.1■□□□□ 0.65
MCF2L-221ENST00000469415 CDR2Q01850 454 aa19.1■□□□□ 0.65
MCF2L-221ENST00000469415 KAZNQ674X7 775 aa19.1■□□□□ 0.65
MCF2L-221ENST00000469415 TRIM50Q86XT4 487 aa19.1■□□□□ 0.65
MCF2L-221ENST00000469415 SCYL3Q8IZE3 742 aa19.1■□□□□ 0.65
MCF2L-221ENST00000469415 MTMR14Q8NCE2 650 aa19.1■□□□□ 0.65
MCF2L-221ENST00000469415 HERPUD2Q9BSE4 406 aa19.1■□□□□ 0.65
MCF2L-221ENST00000469415 ADAM33Q9BZ11 813 aa19.1■□□□□ 0.65
MCF2L-221ENST00000469415 CHST7Q9NS84 486 aa19.1■□□□□ 0.65
MCF2L-221ENST00000469415 HMGB1P1B2RPK0 211 aaPredicted RBP19.1■□□□□ 0.65
MCF2L-221ENST00000469415 ALCAMQ13740 583 aa19.1■□□□□ 0.65
MCF2L-221ENST00000469415 PTGISQ16647 500 aa19.1■□□□□ 0.65
MCF2L-221ENST00000469415 TAX1BP1Q86VP1 789 aa19.1■□□□□ 0.65
MCF2L-221ENST00000469415 DEPTORQ8TB45 409 aa19.1■□□□□ 0.65
MCF2L-221ENST00000469415 ASAP3Q8TDY4 903 aa19.1■□□□□ 0.65
MCF2L-221ENST00000469415 EPS8L3Q8TE67 593 aaKnown RBP19.1■□□□□ 0.65
MCF2L-221ENST00000469415 RNF25Q96BH1 459 aaPredicted RBP19.1■□□□□ 0.65
MCF2L-221ENST00000469415 NAP1L3Q99457 506 aaPredicted RBP19.1■□□□□ 0.65
MCF2L-221ENST00000469415 AZI2Q9H6S1 392 aa19.1■□□□□ 0.65
MCF2L-221ENST00000469415 ANKEF1Q9NU02 776 aa19.1■□□□□ 0.65
MCF2L-221ENST00000469415 CYP39A1Q9NYL5 469 aa19.1■□□□□ 0.65
MCF2L-221ENST00000469415 PCDHB4Q9Y5E5 795 aa19.1■□□□□ 0.65
MCF2L-221ENST00000469415 CSDE1O75534 798 aaKnown RBP19.09■□□□□ 0.65
MCF2L-221ENST00000469415 HLA-DRAP01903 254 aa19.09■□□□□ 0.65
MCF2L-221ENST00000469415 PEX5P50542 639 aa19.09■□□□□ 0.65
MCF2L-221ENST00000469415 PMS2P54278 862 aa19.09■□□□□ 0.65
MCF2L-221ENST00000469415 STRN3Q13033 797 aa19.09■□□□□ 0.65
MCF2L-221ENST00000469415 DUPD1Q68J44 220 aa19.09■□□□□ 0.65
MCF2L-221ENST00000469415 SCARA5Q6ZMJ2 495 aa19.09■□□□□ 0.65
MCF2L-221ENST00000469415 NIPA1Q7RTP0 329 aa19.09■□□□□ 0.65
MCF2L-221ENST00000469415 NLRP14Q86W24 1093 aa19.09■□□□□ 0.65
MCF2L-221ENST00000469415 ATP6V0A4Q9HBG4 840 aa19.09■□□□□ 0.65
MCF2L-221ENST00000469415 K7ERI5 159 aa19.09■□□□□ 0.65
MCF2L-221ENST00000469415 HGSO14964 777 aaPredicted RBP19.09■□□□□ 0.65
MCF2L-221ENST00000469415 BAG6P46379 1132 aa19.09■□□□□ 0.65
MCF2L-221ENST00000469415 SKOR1P84550 965 aa19.09■□□□□ 0.65
MCF2L-221ENST00000469415 MTM1Q13496 603 aa19.09■□□□□ 0.65
MCF2L-221ENST00000469415 EMC2Q15006 297 aa19.09■□□□□ 0.65
MCF2L-221ENST00000469415 ATP13A4Q4VNC1 1196 aa19.09■□□□□ 0.65
MCF2L-221ENST00000469415 SGO2Q562F6 1265 aa19.09■□□□□ 0.65
MCF2L-221ENST00000469415 WDR44Q5JSH3 913 aa19.09■□□□□ 0.65
MCF2L-221ENST00000469415 SLC13A5Q86YT5 568 aaPredicted RBP19.09■□□□□ 0.65
MCF2L-221ENST00000469415 ZNF473Q8WTR7 871 aaKnown RBP19.09■□□□□ 0.65
MCF2L-221ENST00000469415 AGO2Q9UKV8 859 aaKnown RBP19.09■□□□□ 0.65
MCF2L-221ENST00000469415 PHF2O75151 1096 aa19.09■□□□□ 0.65
MCF2L-221ENST00000469415 GJB1P08034 283 aa19.09■□□□□ 0.65
MCF2L-221ENST00000469415 PSMC4P43686 418 aa19.09■□□□□ 0.65
MCF2L-221ENST00000469415 CORO7P57737 925 aa19.09■□□□□ 0.65
MCF2L-221ENST00000469415 FBXW10Q5XX13 1052 aa19.09■□□□□ 0.65
MCF2L-221ENST00000469415 DENND2CQ68D51 928 aa19.09■□□□□ 0.65
MCF2L-221ENST00000469415 NCAPG2Q86XI2 1143 aa19.09■□□□□ 0.65
MCF2L-221ENST00000469415 OR5B17Q8NGF7 314 aa19.09■□□□□ 0.65
MCF2L-221ENST00000469415 KIFAP3Q92845 792 aa19.09■□□□□ 0.65
MCF2L-221ENST00000469415 HAUS1Q96CS2 278 aa19.09■□□□□ 0.65
MCF2L-221ENST00000469415 MRRFQ96E11 262 aaKnown RBP19.09■□□□□ 0.65
MCF2L-221ENST00000469415 LYPLA2O95372 231 aa19.08■□□□□ 0.65
MCF2L-221ENST00000469415 IBSPP21815 317 aaPredicted RBP19.08■□□□□ 0.65
MCF2L-221ENST00000469415 RWDD2BP57060 319 aa19.08■□□□□ 0.65
MCF2L-221ENST00000469415 QPCTQ16769 361 aa19.08■□□□□ 0.65
MCF2L-221ENST00000469415 TDRD10Q5VZ19 366 aaKnown RBP19.08■□□□□ 0.65
MCF2L-221ENST00000469415 ZDHHC24Q6UX98 284 aa19.08■□□□□ 0.65
MCF2L-221ENST00000469415 CAPN12Q6ZSI9 719 aa19.08■□□□□ 0.65
MCF2L-221ENST00000469415 PACS2Q86VP3 889 aa19.08■□□□□ 0.65
MCF2L-221ENST00000469415 LRRC71Q8N4P6 559 aa19.08■□□□□ 0.65
MCF2L-221ENST00000469415 DDX23Q9BUQ8 820 aaKnown RBP19.08■□□□□ 0.65
MCF2L-221ENST00000469415 HAPLN2Q9GZV7 340 aa19.08■□□□□ 0.65
MCF2L-221ENST00000469415 RASAL2Q9UJF2 1139 aa19.08■□□□□ 0.65
MCF2L-221ENST00000469415 SYNGAP1Q96PV0 1343 aa19.08■□□□□ 0.64
MCF2L-221ENST00000469415 H0YHG0 523 aa19.08■□□□□ 0.64
MCF2L-221ENST00000469415 EDN1P05305 212 aa19.08■□□□□ 0.64
MCF2L-221ENST00000469415 MAP3K10Q02779 954 aa19.08■□□□□ 0.64
MCF2L-221ENST00000469415 TMEM132AQ24JP5 1023 aa19.08■□□□□ 0.64
MCF2L-221ENST00000469415 BRDTQ58F21 947 aaPredicted RBP19.08■□□□□ 0.64
MCF2L-221ENST00000469415 RUFY4Q6ZNE9 571 aa19.08■□□□□ 0.64
MCF2L-221ENST00000469415 MYCBPAPQ8TBZ2 947 aa19.08■□□□□ 0.64
MCF2L-221ENST00000469415 TEX13BQ9BXU2 312 aa19.08■□□□□ 0.64
MCF2L-221ENST00000469415 ZNF541Q9H0D2 1346 aa19.07■□□□□ 0.64
MCF2L-221ENST00000469415 COL2A1P02458 1487 aaPredicted RBP19.07■□□□□ 0.64
MCF2L-221ENST00000469415 DGAT1O75907 488 aa19.07■□□□□ 0.64
MCF2L-221ENST00000469415 ATP4AP20648 1035 aa19.07■□□□□ 0.64
MCF2L-221ENST00000469415 DSG3P32926 999 aa19.07■□□□□ 0.64
MCF2L-221ENST00000469415 TNFSF9P41273 254 aa19.07■□□□□ 0.64
MCF2L-221ENST00000469415 NSFP46459 744 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms