RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 PRKCBP05771 671 aa13.54□□□□□ -0.24
HDAC3-204ENST00000469207 C8AP07357 584 aa13.54□□□□□ -0.24
HDAC3-204ENST00000469207 CYP11B2P19099 503 aa13.54□□□□□ -0.24
HDAC3-204ENST00000469207 RFX1P22670 979 aa13.54□□□□□ -0.24
HDAC3-204ENST00000469207 OR1D2P34982 312 aa13.54□□□□□ -0.24
HDAC3-204ENST00000469207 SNW1Q13573 536 aaKnown RBP13.54□□□□□ -0.24
HDAC3-204ENST00000469207 TRIM29Q14134 588 aa13.54□□□□□ -0.24
HDAC3-204ENST00000469207 NBR1Q14596 966 aa13.54□□□□□ -0.24
HDAC3-204ENST00000469207 FAM187BQ17R55 369 aa13.54□□□□□ -0.24
HDAC3-204ENST00000469207 PPM1LQ5SGD2 360 aa13.54□□□□□ -0.24
HDAC3-204ENST00000469207 ELMSAN1Q6PJG2 1045 aa13.54□□□□□ -0.24
HDAC3-204ENST00000469207 CD300LGQ6UXG3 332 aa13.54□□□□□ -0.24
HDAC3-204ENST00000469207 MCPH1Q8NEM0 835 aa13.54□□□□□ -0.24
HDAC3-204ENST00000469207 KCNG4Q8TDN1 519 aa13.54□□□□□ -0.24
HDAC3-204ENST00000469207 PIK3R5Q8WYR1 880 aa13.54□□□□□ -0.24
HDAC3-204ENST00000469207 PRIMPOLQ96LW4 560 aa13.54□□□□□ -0.24
HDAC3-204ENST00000469207 GOLGA2P5Q9HBQ8 144 aa13.54□□□□□ -0.24
HDAC3-204ENST00000469207 DLGAP2Q9P1A6 1054 aa13.54□□□□□ -0.24
HDAC3-204ENST00000469207 FBXW11Q9UKB1 542 aa13.54□□□□□ -0.24
HDAC3-204ENST00000469207 MTF2Q9Y483 593 aaPredicted RBP13.54□□□□□ -0.24
HDAC3-204ENST00000469207 SF3B1O75533 1304 aaKnown RBP eCLIP13.54□□□□□ -0.248e-6■■■■■ 107
HDAC3-204ENST00000469207 DCHS1Q96JQ0 3298 aa13.54□□□□□ -0.24
HDAC3-204ENST00000469207 N4BP3O15049 544 aa13.53□□□□□ -0.24
HDAC3-204ENST00000469207 RPA1P27694 616 aa13.53□□□□□ -0.24
HDAC3-204ENST00000469207 BRCC3P46736 316 aa13.53□□□□□ -0.24
HDAC3-204ENST00000469207 CLCNKBP51801 687 aa13.53□□□□□ -0.24
HDAC3-204ENST00000469207 MAPK6Q16659 721 aa13.53□□□□□ -0.24
HDAC3-204ENST00000469207 AXDND1Q5T1B0 1012 aaPredicted RBP13.53□□□□□ -0.24
HDAC3-204ENST00000469207 DCLRE1AQ6PJP8 1040 aa13.53□□□□□ -0.24
HDAC3-204ENST00000469207 GPR65Q8IYL9 337 aa13.53□□□□□ -0.24
HDAC3-204ENST00000469207 CEP120Q8N960 986 aa13.53□□□□□ -0.24
HDAC3-204ENST00000469207 DEPTORQ8TB45 409 aa13.53□□□□□ -0.24
HDAC3-204ENST00000469207 SLC7A14Q8TBB6 771 aa13.53□□□□□ -0.24
HDAC3-204ENST00000469207 FGF13Q92913 245 aa13.53□□□□□ -0.24
HDAC3-204ENST00000469207 NXPE3Q969Y0 559 aa13.53□□□□□ -0.24
HDAC3-204ENST00000469207 ARHGEF3Q9NR81 526 aa13.53□□□□□ -0.24
HDAC3-204ENST00000469207 DNMT3BQ9UBC3 853 aaKnown RBP13.53□□□□□ -0.24
HDAC3-204ENST00000469207 SIT1Q9Y3P8 196 aa13.53□□□□□ -0.24
HDAC3-204ENST00000469207 FAM186AA6NE01 2351 aa13.52□□□□□ -0.24
HDAC3-204ENST00000469207 SPTBN4Q9H254 2564 aa13.52□□□□□ -0.24
HDAC3-204ENST00000469207 ARHGEF35A5YM69 484 aa13.52□□□□□ -0.25
HDAC3-204ENST00000469207 C1RP00736 705 aa13.52□□□□□ -0.25
HDAC3-204ENST00000469207 CD72P21854 359 aa13.52□□□□□ -0.25
HDAC3-204ENST00000469207 OSTNP61366 133 aa13.52□□□□□ -0.25
HDAC3-204ENST00000469207 SOX4Q06945 474 aaPredicted RBP13.52□□□□□ -0.25
HDAC3-204ENST00000469207 CCDC83Q8IWF9 413 aa13.52□□□□□ -0.25
HDAC3-204ENST00000469207 TMEM130Q8N3G9 435 aa13.52□□□□□ -0.25
HDAC3-204ENST00000469207 C4orf32Q8N8J7 132 aa13.52□□□□□ -0.25
HDAC3-204ENST00000469207 C3orf58Q8NDZ4 430 aa13.52□□□□□ -0.25
HDAC3-204ENST00000469207 ING5Q8WYH8 240 aa13.52□□□□□ -0.25
HDAC3-204ENST00000469207 KXD1Q9BQD3 176 aa13.52□□□□□ -0.25
HDAC3-204ENST00000469207 C2orf40Q9H1Z8 148 aa13.52□□□□□ -0.25
HDAC3-204ENST00000469207 BHMT2Q9H2M3 363 aa13.52□□□□□ -0.25
HDAC3-204ENST00000469207 CDH7Q9ULB5 785 aa13.52□□□□□ -0.25
HDAC3-204ENST00000469207 VWA8A3KMH1 1905 aa13.52□□□□□ -0.25
HDAC3-204ENST00000469207 B3GAT3O94766 335 aa13.51□□□□□ -0.25
HDAC3-204ENST00000469207 OR52Z1P0C646 297 aa13.51□□□□□ -0.25
HDAC3-204ENST00000469207 TKTP29401 623 aaKnown RBP13.51□□□□□ -0.25
HDAC3-204ENST00000469207 CCT6AP40227 531 aaKnown RBP13.51□□□□□ -0.25
HDAC3-204ENST00000469207 NAMPTP43490 491 aa13.51□□□□□ -0.25
HDAC3-204ENST00000469207 ID4P47928 161 aa13.51□□□□□ -0.25
HDAC3-204ENST00000469207 RAB33AQ14088 237 aa13.51□□□□□ -0.25
HDAC3-204ENST00000469207 LIN9Q5TKA1 542 aa13.51□□□□□ -0.25
HDAC3-204ENST00000469207 ATF7IP2Q5U623 682 aa13.51□□□□□ -0.25
HDAC3-204ENST00000469207 PHLDB3Q6NSJ2 640 aa13.51□□□□□ -0.25
HDAC3-204ENST00000469207 MAML2Q8IZL2 1156 aaPredicted RBP13.51□□□□□ -0.25
HDAC3-204ENST00000469207 DCLK2Q8N568 766 aa13.51□□□□□ -0.25
HDAC3-204ENST00000469207 MCRS1Q96EZ8 462 aa13.51□□□□□ -0.25
HDAC3-204ENST00000469207 C8orf76Q96K31 380 aa13.51□□□□□ -0.25
HDAC3-204ENST00000469207 PPP1R10Q96QC0 940 aaKnown RBP13.51□□□□□ -0.25
HDAC3-204ENST00000469207 ADPGKQ9BRR6 497 aa13.51□□□□□ -0.25
HDAC3-204ENST00000469207 PLA2G2FQ9BZM2 168 aa13.51□□□□□ -0.25
HDAC3-204ENST00000469207 SLC2A4RGQ9NR83 387 aa13.51□□□□□ -0.25
HDAC3-204ENST00000469207 KIAA1024Q9UPX6 916 aa13.51□□□□□ -0.25
HDAC3-204ENST00000469207 CDY1Q9Y6F8 540 aa13.51□□□□□ -0.25
HDAC3-204ENST00000469207 WDR87Q6ZQQ6 2873 aa13.51□□□□□ -0.25
HDAC3-204ENST00000469207 NOTCH4Q99466 2003 aa13.51□□□□□ -0.25
HDAC3-204ENST00000469207 E9PMD0 336 aa13.5□□□□□ -0.25
HDAC3-204ENST00000469207 NRG2O14511 850 aaPredicted RBP13.5□□□□□ -0.25
HDAC3-204ENST00000469207 HNRNPA1P09651 372 aaKnown RBP eCLIP13.5□□□□□ -0.25
HDAC3-204ENST00000469207 SP9P0CG40 484 aa13.5□□□□□ -0.25
HDAC3-204ENST00000469207 FGFR3P22607 806 aa13.5□□□□□ -0.25
HDAC3-204ENST00000469207 CDC25AP30304 524 aa13.5□□□□□ -0.25
HDAC3-204ENST00000469207 STARD6P59095 220 aa13.5□□□□□ -0.25
HDAC3-204ENST00000469207 CREMQ03060 361 aa13.5□□□□□ -0.25
HDAC3-204ENST00000469207 SAFBQ15424 915 aaKnown RBP eCLIP13.5□□□□□ -0.25
HDAC3-204ENST00000469207 UPP1Q16831 310 aa13.5□□□□□ -0.25
HDAC3-204ENST00000469207 SLC44A4Q53GD3 710 aa13.5□□□□□ -0.25
HDAC3-204ENST00000469207 TTC38Q5R3I4 469 aa13.5□□□□□ -0.25
HDAC3-204ENST00000469207 C1orf210Q8IVY1 113 aa13.5□□□□□ -0.25
HDAC3-204ENST00000469207 ZMAT2Q96NC0 199 aaKnown RBP13.5□□□□□ -0.25
HDAC3-204ENST00000469207 MTRRQ9UBK8 725 aa13.5□□□□□ -0.25
HDAC3-204ENST00000469207 TRIP11Q15643 1979 aa13.5□□□□□ -0.25
HDAC3-204ENST00000469207 ZMYM2Q9UBW7 1377 aa13.49□□□□□ -0.25
HDAC3-204ENST00000469207 SMIM28A0A1B0GU29 152 aa13.49□□□□□ -0.25
HDAC3-204ENST00000469207 CCDC169A6NNP5 214 aa13.49□□□□□ -0.25
HDAC3-204ENST00000469207 SFI1A8K8P3 1242 aa13.49□□□□□ -0.25
HDAC3-204ENST00000469207 PP2D1A8MPX8 630 aa13.49□□□□□ -0.25
HDAC3-204ENST00000469207 K7ERI5 159 aa13.49□□□□□ -0.25
HDAC3-204ENST00000469207 LMNAP02545 664 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms