RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 SEMA4AQ9H3S1 761 aa13.53□□□□□ -0.24
COL5A1-207ENST00000469093 ARHGEF3Q9NR81 526 aa13.53□□□□□ -0.24
COL5A1-207ENST00000469093 CDH7Q9ULB5 785 aa13.53□□□□□ -0.24
COL5A1-207ENST00000469093 RECQL4O94761 1208 aa13.52□□□□□ -0.25
COL5A1-207ENST00000469093 LMNAP02545 664 aaKnown RBP13.52□□□□□ -0.25
COL5A1-207ENST00000469093 EDN1P05305 212 aa13.52□□□□□ -0.25
COL5A1-207ENST00000469093 C8AP07357 584 aa13.52□□□□□ -0.25
COL5A1-207ENST00000469093 IGFBP6P24592 240 aaPredicted RBP13.52□□□□□ -0.25
COL5A1-207ENST00000469093 RPA1P27694 616 aa13.52□□□□□ -0.25
COL5A1-207ENST00000469093 STARD6P59095 220 aa13.52□□□□□ -0.25
COL5A1-207ENST00000469093 TRIM29Q14134 588 aa13.52□□□□□ -0.25
COL5A1-207ENST00000469093 MAPK6Q16659 721 aa13.52□□□□□ -0.25
COL5A1-207ENST00000469093 PPM1LQ5SGD2 360 aa13.52□□□□□ -0.25
COL5A1-207ENST00000469093 EEF1DP3Q658K8 133 aa13.52□□□□□ -0.25
COL5A1-207ENST00000469093 KCNG4Q8TDN1 519 aa13.52□□□□□ -0.25
COL5A1-207ENST00000469093 FGF13Q92913 245 aa13.52□□□□□ -0.25
COL5A1-207ENST00000469093 CCDC113Q9H0I3 377 aa13.52□□□□□ -0.25
COL5A1-207ENST00000469093 C2orf40Q9H1Z8 148 aa13.52□□□□□ -0.25
COL5A1-207ENST00000469093 R4GN57 208 aa13.52□□□□□ -0.25
COL5A1-207ENST00000469093 CCL16O15467 120 aa13.51□□□□□ -0.25
COL5A1-207ENST00000469093 PRKCBP05771 671 aa13.51□□□□□ -0.25
COL5A1-207ENST00000469093 GLULP15104 373 aa13.51□□□□□ -0.25
COL5A1-207ENST00000469093 LIG1P18858 919 aa13.51□□□□□ -0.25
COL5A1-207ENST00000469093 FGFR3P22607 806 aa13.51□□□□□ -0.25
COL5A1-207ENST00000469093 HOXA9P31269 272 aa13.51□□□□□ -0.25
COL5A1-207ENST00000469093 OR1D2P34982 312 aa13.51□□□□□ -0.25
COL5A1-207ENST00000469093 NAMPTP43490 491 aa13.51□□□□□ -0.25
COL5A1-207ENST00000469093 ID4P47928 161 aa13.51□□□□□ -0.25
COL5A1-207ENST00000469093 ST3GAL1Q11201 340 aa13.51□□□□□ -0.25
COL5A1-207ENST00000469093 ELAVL2Q12926 359 aaKnown RBP13.51□□□□□ -0.25
COL5A1-207ENST00000469093 SNW1Q13573 536 aaKnown RBP13.51□□□□□ -0.25
COL5A1-207ENST00000469093 RAB33AQ14088 237 aa13.51□□□□□ -0.25
COL5A1-207ENST00000469093 ZNF174Q15697 407 aa13.51□□□□□ -0.25
COL5A1-207ENST00000469093 TMEM132AQ24JP5 1023 aa13.51□□□□□ -0.25
COL5A1-207ENST00000469093 UVSSAQ2YD98 709 aa13.51□□□□□ -0.25
COL5A1-207ENST00000469093 AXDND1Q5T1B0 1012 aaPredicted RBP13.51□□□□□ -0.25
COL5A1-207ENST00000469093 LIN9Q5TKA1 542 aa13.51□□□□□ -0.25
COL5A1-207ENST00000469093 CD300LGQ6UXG3 332 aa13.51□□□□□ -0.25
COL5A1-207ENST00000469093 RSPO2Q6UXX9 243 aaPredicted RBP13.51□□□□□ -0.25
COL5A1-207ENST00000469093 C1orf210Q8IVY1 113 aa13.51□□□□□ -0.25
COL5A1-207ENST00000469093 DEPTORQ8TB45 409 aa13.51□□□□□ -0.25
COL5A1-207ENST00000469093 ITFG1Q8TB96 612 aa13.51□□□□□ -0.25
COL5A1-207ENST00000469093 ADPGKQ9BRR6 497 aa13.51□□□□□ -0.25
COL5A1-207ENST00000469093 FOXQ1Q9C009 403 aa13.51□□□□□ -0.25
COL5A1-207ENST00000469093 POLD4Q9HCU8 107 aa13.51□□□□□ -0.25
COL5A1-207ENST00000469093 POLIQ9UNA4 740 aa13.51□□□□□ -0.25
COL5A1-207ENST00000469093 GDAQ9Y2T3 454 aa13.51□□□□□ -0.25
COL5A1-207ENST00000469093 GPR179Q6PRD1 2367 aa13.51□□□□□ -0.25
COL5A1-207ENST00000469093 OTOGLQ3ZCN5 2332 aa13.5□□□□□ -0.25
COL5A1-207ENST00000469093 LRRN2O75325 713 aa13.5□□□□□ -0.25
COL5A1-207ENST00000469093 B3GAT3O94766 335 aa13.5□□□□□ -0.25
COL5A1-207ENST00000469093 SP9P0CG40 484 aa13.5□□□□□ -0.25
COL5A1-207ENST00000469093 NEK4P51957 841 aa13.5□□□□□ -0.25
COL5A1-207ENST00000469093 GUCY1B3Q02153 619 aa13.5□□□□□ -0.25
COL5A1-207ENST00000469093 SLC44A4Q53GD3 710 aa13.5□□□□□ -0.25
COL5A1-207ENST00000469093 NT5DC1Q5TFE4 455 aa13.5□□□□□ -0.25
COL5A1-207ENST00000469093 PDXDC1Q6P996 788 aa13.5□□□□□ -0.25
COL5A1-207ENST00000469093 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.5□□□□□ -0.25
COL5A1-207ENST00000469093 ERMP1Q7Z2K6 904 aa13.5□□□□□ -0.25
COL5A1-207ENST00000469093 PJA1Q8NG27 643 aa13.5□□□□□ -0.25
COL5A1-207ENST00000469093 ERMNQ8TAM6 284 aa13.5□□□□□ -0.25
COL5A1-207ENST00000469093 SLC7A14Q8TBB6 771 aa13.5□□□□□ -0.25
COL5A1-207ENST00000469093 SHDQ96IW2 340 aa13.5□□□□□ -0.25
COL5A1-207ENST00000469093 KIFC3Q9BVG8 833 aa13.5□□□□□ -0.25
COL5A1-207ENST00000469093 DNMT3BQ9UBC3 853 aaKnown RBP13.5□□□□□ -0.25
COL5A1-207ENST00000469093 ARHGEF35A5YM69 484 aa13.49□□□□□ -0.25
COL5A1-207ENST00000469093 TMEM189-UBE2V1I3L0A0 370 aa13.49□□□□□ -0.25
COL5A1-207ENST00000469093 XYLBO75191 536 aa13.49□□□□□ -0.25
COL5A1-207ENST00000469093 POU2F2P09086 479 aa13.49□□□□□ -0.25
COL5A1-207ENST00000469093 OR52Z1P0C646 297 aa13.49□□□□□ -0.25
COL5A1-207ENST00000469093 RBM25P49756 843 aaKnown RBP13.49□□□□□ -0.25
COL5A1-207ENST00000469093 PPP2R5AQ15172 486 aa13.49□□□□□ -0.25
COL5A1-207ENST00000469093 SAFBQ15424 915 aaKnown RBP eCLIP13.49□□□□□ -0.25
COL5A1-207ENST00000469093 ECM1Q16610 540 aa13.49□□□□□ -0.25
COL5A1-207ENST00000469093 UPP1Q16831 310 aa13.49□□□□□ -0.25
COL5A1-207ENST00000469093 GLRA4Q5JXX5 417 aa13.49□□□□□ -0.25
COL5A1-207ENST00000469093 RTL10Q7L3V2 364 aa13.49□□□□□ -0.25
COL5A1-207ENST00000469093 MAML2Q8IZL2 1156 aaPredicted RBP13.49□□□□□ -0.25
COL5A1-207ENST00000469093 PPP1R10Q96QC0 940 aaKnown RBP13.49□□□□□ -0.25
COL5A1-207ENST00000469093 DDX23Q9BUQ8 820 aaKnown RBP13.49□□□□□ -0.25
COL5A1-207ENST00000469093 HCFC1R1Q9NWW0 138 aa13.49□□□□□ -0.25
COL5A1-207ENST00000469093 MTRRQ9UBK8 725 aa13.49□□□□□ -0.25
COL5A1-207ENST00000469093 KCNH3Q9ULD8 1083 aa13.49□□□□□ -0.25
COL5A1-207ENST00000469093 BACE2Q9Y5Z0 518 aa13.49□□□□□ -0.25
COL5A1-207ENST00000469093 KANSL1LA0AUZ9 987 aa13.48□□□□□ -0.25
COL5A1-207ENST00000469093 MUTP22033 750 aa13.48□□□□□ -0.25
COL5A1-207ENST00000469093 CLCNKBP51801 687 aa13.48□□□□□ -0.25
COL5A1-207ENST00000469093 EFNA5P52803 228 aa13.48□□□□□ -0.25
COL5A1-207ENST00000469093 DCAF4L1Q3SXM0 396 aa13.48□□□□□ -0.25
COL5A1-207ENST00000469093 ATF7IP2Q5U623 682 aa13.48□□□□□ -0.25
COL5A1-207ENST00000469093 MTSS1LQ765P7 747 aa13.48□□□□□ -0.25
COL5A1-207ENST00000469093 BHMT2Q9H2M3 363 aa13.48□□□□□ -0.25
COL5A1-207ENST00000469093 DAXXQ9UER7 740 aaPredicted RBP13.48□□□□□ -0.25
COL5A1-207ENST00000469093 MTF2Q9Y483 593 aaPredicted RBP13.48□□□□□ -0.25
COL5A1-207ENST00000469093 CDY1Q9Y6F8 540 aa13.48□□□□□ -0.25
COL5A1-207ENST00000469093 ZNF292O60281 2723 aa13.48□□□□□ -0.25
COL5A1-207ENST00000469093 SMIM28A0A1B0GU29 152 aa13.47□□□□□ -0.25
COL5A1-207ENST00000469093 K7ERI5 159 aa13.47□□□□□ -0.25
COL5A1-207ENST00000469093 TKTP29401 623 aaKnown RBP13.47□□□□□ -0.25
COL5A1-207ENST00000469093 PRKCQQ04759 706 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms