RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 PLEKHG1Q9ULL1 1385 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 PPLO60437 1756 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 TULP4Q9NRJ4 1543 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 HTR3EA5X5Y0 456 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 BTNL10A8MVZ5 291 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 H0YGN5 161 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 IGF2BP3O00425 579 aaKnown RBP eCLIP5.2□□□□□ -1.58
SF3B1-207ENST00000468925 ELL2O00472 640 aaPredicted RBP5.2□□□□□ -1.58
SF3B1-207ENST00000468925 SH2B2O14492 632 aaPredicted RBP5.2□□□□□ -1.58
SF3B1-207ENST00000468925 CPLX1O14810 134 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 NDUFB5O43674 189 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 TAF5LO75529 589 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 HEXIM1O94992 359 aaKnown RBP5.2□□□□□ -1.58
SF3B1-207ENST00000468925 TJP3O95049 919 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 ZWINTO95229 277 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 OAS1P00973 400 aaKnown RBP5.2□□□□□ -1.58
SF3B1-207ENST00000468925 MMEP08473 750 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 ITGA2BP08514 1039 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 MSL3P1P0C860 447 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 MYBP10242 640 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 CPA1P15085 419 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 KCNA3P22001 575 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 ANXA13P27216 316 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 HPDP32754 393 aaPredicted RBP5.2□□□□□ -1.58
SF3B1-207ENST00000468925 CDK7P50613 346 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 COPB1P53618 953 aaKnown RBP5.2□□□□□ -1.58
SF3B1-207ENST00000468925 MTTPP55157 894 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 CABP4P57796 275 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 KIF23Q02241 960 aaPredicted RBP5.2□□□□□ -1.58
SF3B1-207ENST00000468925 MCL1Q07820 350 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 ZNF844Q08AG5 666 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 C2orf54Q08AI8 447 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 FOXD4Q12950 439 aaPredicted RBP5.2□□□□□ -1.58
SF3B1-207ENST00000468925 STK3Q13188 491 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 BTG3Q14201 252 aaPredicted RBP5.2□□□□□ -1.58
SF3B1-207ENST00000468925 SPCS2Q15005 226 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 CCDC6Q16204 474 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 BCL2A1Q16548 175 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 MCMDC2Q4G0Z9 681 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 TBC1D10BQ4KMP7 808 aaPredicted RBP5.2□□□□□ -1.58
SF3B1-207ENST00000468925 LIN52Q52LA3 116 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 PLEKHG4Q58EX7 1191 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 ODR4Q5SWX8 454 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 MAP3K21Q5TCX8 1036 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 TRIM68Q6AZZ1 485 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 OLFML1Q6UWY5 402 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 CLEC4GQ6UXB4 293 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 TMTC3Q6ZXV5 915 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 APTXQ7Z2E3 356 aaKnown RBP5.2□□□□□ -1.58
SF3B1-207ENST00000468925 PPP1R42Q7Z4L9 355 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 C11orf96Q7Z7L8 435 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 MAP7D3Q8IWC1 876 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 ZNF654Q8IZM8 581 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 SH2D3CQ8N5H7 860 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 SYT2Q8N9I0 419 aaPredicted RBP5.2□□□□□ -1.58
SF3B1-207ENST00000468925 LRRC8CQ8TDW0 803 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 ABHD8Q96I13 439 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 ZNF333Q96JL9 665 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 CCDC42Q96M95 316 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 RUNDC3BQ96NL0 473 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.2□□□□□ -1.584e-6■■□□□ 12.7
SF3B1-207ENST00000468925 FSD1Q9BTV5 496 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 CEP41Q9BYV8 373 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 ANKRD2Q9GZV1 360 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 NACA2Q9H009 215 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 DDX47Q9H0S4 455 aaKnown RBP5.2□□□□□ -1.58
SF3B1-207ENST00000468925 IL25Q9H293 177 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 MRPL46Q9H2W6 279 aaKnown RBP5.2□□□□□ -1.58
SF3B1-207ENST00000468925 EPB41L5Q9HCM4 733 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 SAR1AQ9NR31 198 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 INTS9Q9NV88 658 aaKnown RBP5.2□□□□□ -1.58
SF3B1-207ENST00000468925 INTUQ9ULD6 942 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 CARD8Q9Y2G2 431 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 STXBP5LQ9Y2K9 1186 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 CLIC4Q9Y696 253 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 NFS1Q9Y697 457 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 MST1RQ04912 1400 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 ABCB11O95342 1321 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 MYPNQ86TC9 1320 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 ADGRF5Q8IZF2 1346 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 XRN1Q8IZH2 1706 aaKnown RBP5.2□□□□□ -1.58
SF3B1-207ENST00000468925 ARHGEF28Q8N1W1 1705 aaKnown RBP5.2□□□□□ -1.58
SF3B1-207ENST00000468925 CD163L1Q9NR16 1453 aa5.2□□□□□ -1.58
SF3B1-207ENST00000468925 SETD1BQ9UPS6 1966 aaKnown RBP5.19□□□□□ -1.58
SF3B1-207ENST00000468925 SSU72P8A0A1W2PR75 194 aa5.19□□□□□ -1.58
SF3B1-207ENST00000468925 LGALS16A8MUM7 142 aa5.19□□□□□ -1.58
SF3B1-207ENST00000468925 F8W031 263 aaPredicted RBP5.19□□□□□ -1.58
SF3B1-207ENST00000468925 F8W8V4 182 aa5.19□□□□□ -1.58
SF3B1-207ENST00000468925 GOLGA8TH3BQL2 631 aa5.19□□□□□ -1.58
SF3B1-207ENST00000468925 H3BRJ5 948 aa5.19□□□□□ -1.58
SF3B1-207ENST00000468925 MAPK13O15264 365 aa5.19□□□□□ -1.58
SF3B1-207ENST00000468925 IDH3BO43837 385 aa5.19□□□□□ -1.58
SF3B1-207ENST00000468925 FGFR1OPO95684 399 aaKnown RBP5.19□□□□□ -1.58
SF3B1-207ENST00000468925 PDGFAP04085 211 aa5.19□□□□□ -1.58
SF3B1-207ENST00000468925 CCDC159P0C7I6 412 aa5.19□□□□□ -1.58
SF3B1-207ENST00000468925 GOLGA8HP0CJ92 632 aa5.19□□□□□ -1.58
SF3B1-207ENST00000468925 ALOX15P16050 662 aaPredicted RBP5.19□□□□□ -1.58
SF3B1-207ENST00000468925 NAT1P18440 290 aa5.19□□□□□ -1.58
SF3B1-207ENST00000468925 MARK3P27448 753 aa5.19□□□□□ -1.58
SF3B1-207ENST00000468925 PDIA3P30101 505 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms