RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 KAT5Q92993 513 aa7.12□□□□□ -1.27
XRN1-207ENST00000468894 AASDHPPTQ9NRN7 309 aa7.12□□□□□ -1.27
XRN1-207ENST00000468894 SLC23A1Q9UHI7 598 aa7.12□□□□□ -1.27
XRN1-207ENST00000468894 PNPLA7Q6ZV29 1317 aa7.11□□□□□ -1.27
XRN1-207ENST00000468894 LEFTY2O00292 366 aa7.11□□□□□ -1.27
XRN1-207ENST00000468894 ABLIM3O94929 683 aa7.11□□□□□ -1.27
XRN1-207ENST00000468894 SNRPA1P09661 255 aaKnown RBP7.11□□□□□ -1.27
XRN1-207ENST00000468894 APOBEC3AP31941 199 aaPredicted RBP7.11□□□□□ -1.27
XRN1-207ENST00000468894 CDC42EP1Q00587 391 aa7.11□□□□□ -1.27
XRN1-207ENST00000468894 PTH1RQ03431 593 aa7.11□□□□□ -1.27
XRN1-207ENST00000468894 FOXE3Q13461 319 aa7.11□□□□□ -1.27
XRN1-207ENST00000468894 PIN1Q13526 163 aaPredicted RBP7.11□□□□□ -1.27
XRN1-207ENST00000468894 OTUD7BQ6GQQ9 843 aa7.11□□□□□ -1.27
XRN1-207ENST00000468894 MYOCQ99972 504 aa7.11□□□□□ -1.27
XRN1-207ENST00000468894 NDC1Q9BTX1 674 aa7.11□□□□□ -1.27
XRN1-207ENST00000468894 MRI1Q9BV20 369 aa7.11□□□□□ -1.27
XRN1-207ENST00000468894 ZNF747Q9BV97 191 aa7.11□□□□□ -1.27
XRN1-207ENST00000468894 TCF7L1Q9HCS4 588 aa7.11□□□□□ -1.27
XRN1-207ENST00000468894 CLCA2Q9UQC9 943 aa7.11□□□□□ -1.27
XRN1-207ENST00000468894 RUVBL1Q9Y265 456 aaKnown RBP7.11□□□□□ -1.27
XRN1-207ENST00000468894 THRAP3Q9Y2W1 955 aaKnown RBP7.11□□□□□ -1.27
XRN1-207ENST00000468894 ATP5JP18859 108 aa7.1□□□□□ -1.27
XRN1-207ENST00000468894 DDCP20711 480 aa7.1□□□□□ -1.27
XRN1-207ENST00000468894 RAP2BP61225 183 aa7.1□□□□□ -1.27
XRN1-207ENST00000468894 RRP12Q5JTH9 1297 aaKnown RBP7.1□□□□□ -1.27
XRN1-207ENST00000468894 EFCAB12Q6NXP0 572 aa7.1□□□□□ -1.27
XRN1-207ENST00000468894 DBX2Q6ZNG2 339 aa7.1□□□□□ -1.27
XRN1-207ENST00000468894 SEM1Q6ZVN7 128 aa7.1□□□□□ -1.27
XRN1-207ENST00000468894 MIER2Q8N344 545 aa7.1□□□□□ -1.27
XRN1-207ENST00000468894 DCBLD1Q8N8Z6 715 aa7.1□□□□□ -1.27
XRN1-207ENST00000468894 ZFP28Q8NHY6 868 aa7.1□□□□□ -1.27
XRN1-207ENST00000468894 TMX3Q96JJ7 454 aa7.1□□□□□ -1.27
XRN1-207ENST00000468894 PLEKHG4BQ96PX9 1271 aa7.1□□□□□ -1.27
XRN1-207ENST00000468894 RTFDC1Q9BY42 306 aaPredicted RBP7.1□□□□□ -1.27
XRN1-207ENST00000468894 CSRNP2Q9H175 543 aa7.1□□□□□ -1.27
XRN1-207ENST00000468894 VPS11Q9H270 941 aa7.1□□□□□ -1.27
XRN1-207ENST00000468894 TDP1Q9NUW8 608 aa7.1□□□□□ -1.27
XRN1-207ENST00000468894 PARPBPQ9NWS1 579 aa7.1□□□□□ -1.27
XRN1-207ENST00000468894 IP6K2Q9UHH9 426 aa7.1□□□□□ -1.27
XRN1-207ENST00000468894 PCDHB1Q9Y5F3 818 aa7.1□□□□□ -1.27
XRN1-207ENST00000468894 TRIM24O15164 1050 aa7.09□□□□□ -1.27
XRN1-207ENST00000468894 TEX33O43247 280 aa7.09□□□□□ -1.27
XRN1-207ENST00000468894 SGTAO43765 313 aa7.09□□□□□ -1.27
XRN1-207ENST00000468894 FAM20BO75063 409 aa7.09□□□□□ -1.27
XRN1-207ENST00000468894 IL33O95760 270 aa7.09□□□□□ -1.27
XRN1-207ENST00000468894 AMHP03971 560 aa7.09□□□□□ -1.27
XRN1-207ENST00000468894 RABL3Q5HYI8 236 aa7.09□□□□□ -1.27
XRN1-207ENST00000468894 ODR4Q5SWX8 454 aa7.09□□□□□ -1.27
XRN1-207ENST00000468894 ATXN7L2Q5T6C5 722 aaPredicted RBP7.09□□□□□ -1.27
XRN1-207ENST00000468894 LCE5AQ5TCM9 118 aa7.09□□□□□ -1.27
XRN1-207ENST00000468894 CRIP3Q6Q6R5 217 aa7.09□□□□□ -1.27
XRN1-207ENST00000468894 PLXDC1Q8IUK5 500 aa7.09□□□□□ -1.27
XRN1-207ENST00000468894 RAVER1Q8IY67 606 aaKnown RBP7.09□□□□□ -1.27
XRN1-207ENST00000468894 DRC7Q8IY82 874 aa7.09□□□□□ -1.27
XRN1-207ENST00000468894 ANKRD13AQ8IZ07 590 aa7.09□□□□□ -1.27
XRN1-207ENST00000468894 IFI44Q8TCB0 444 aa7.09□□□□□ -1.27
XRN1-207ENST00000468894 HSPBAP1Q96EW2 488 aa7.09□□□□□ -1.27
XRN1-207ENST00000468894 NEU1Q99519 415 aa7.09□□□□□ -1.27
XRN1-207ENST00000468894 RHOBTB2Q9BYZ6 727 aa7.09□□□□□ -1.27
XRN1-207ENST00000468894 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.09□□□□□ -1.27
XRN1-207ENST00000468894 SORCS3Q9UPU3 1222 aa7.09□□□□□ -1.27
XRN1-207ENST00000468894 CHST2Q9Y4C5 530 aa7.09□□□□□ -1.27
XRN1-207ENST00000468894 AHRRA9YTQ3 701 aa7.08□□□□□ -1.28
XRN1-207ENST00000468894 AKAP10O43572 662 aa7.08□□□□□ -1.28
XRN1-207ENST00000468894 MGAT1P26572 445 aa7.08□□□□□ -1.28
XRN1-207ENST00000468894 NHLH2Q02577 135 aa7.08□□□□□ -1.28
XRN1-207ENST00000468894 METRNLQ641Q3 311 aa7.08□□□□□ -1.28
XRN1-207ENST00000468894 ZNF529Q6P280 563 aa7.08□□□□□ -1.28
XRN1-207ENST00000468894 MRGPRX4Q96LA9 322 aa7.08□□□□□ -1.28
XRN1-207ENST00000468894 FBXO34Q9NWN3 711 aa7.08□□□□□ -1.28
XRN1-207ENST00000468894 POGKQ9P215 609 aa7.08□□□□□ -1.28
XRN1-207ENST00000468894 EIF2B4Q9UI10 523 aaKnown RBP7.08□□□□□ -1.28
XRN1-207ENST00000468894 CFAP20Q9Y6A4 193 aaKnown RBP7.08□□□□□ -1.28
XRN1-207ENST00000468894 PF4V1P10720 104 aa7.07□□□□□ -1.28
XRN1-207ENST00000468894 ZSCAN20P17040 1043 aaPredicted RBP7.07□□□□□ -1.28
XRN1-207ENST00000468894 FXR1P51114 621 aaKnown RBP eCLIP7.07□□□□□ -1.28
XRN1-207ENST00000468894 RAB27AP51159 221 aa7.07□□□□□ -1.28
XRN1-207ENST00000468894 CHN2P52757 468 aa7.07□□□□□ -1.28
XRN1-207ENST00000468894 EPHB1P54762 984 aa7.07□□□□□ -1.28
XRN1-207ENST00000468894 CTXN1P60606 82 aa7.07□□□□□ -1.28
XRN1-207ENST00000468894 DSC2Q02487 901 aa7.07□□□□□ -1.28
XRN1-207ENST00000468894 CATIPQ7Z7H3 387 aa7.07□□□□□ -1.28
XRN1-207ENST00000468894 RSPH3Q86UC2 560 aa7.07□□□□□ -1.28
XRN1-207ENST00000468894 Q8N1X5 172 aa7.07□□□□□ -1.28
XRN1-207ENST00000468894 CPT1CQ8TCG5 803 aa7.07□□□□□ -1.28
XRN1-207ENST00000468894 NSUN6Q8TEA1 469 aaKnown RBP7.07□□□□□ -1.28
XRN1-207ENST00000468894 DMRTA2Q96SC8 542 aa7.07□□□□□ -1.28
XRN1-207ENST00000468894 ZNF768Q9H5H4 540 aaKnown RBP7.07□□□□□ -1.28
XRN1-207ENST00000468894 DRGXA6NNA5 263 aa7.06□□□□□ -1.28
XRN1-207ENST00000468894 SCAF4O95104 1147 aaKnown RBP7.06□□□□□ -1.28
XRN1-207ENST00000468894 TACR2P21452 398 aa7.06□□□□□ -1.28
XRN1-207ENST00000468894 NR4A1P22736 598 aa7.06□□□□□ -1.28
XRN1-207ENST00000468894 ZFP36P26651 326 aaKnown RBP7.06□□□□□ -1.28
XRN1-207ENST00000468894 RNASE9P60153 205 aaKnown RBP7.06□□□□□ -1.28
XRN1-207ENST00000468894 FAM189BP81408 668 aa7.06□□□□□ -1.28
XRN1-207ENST00000468894 TUBA3CQ13748 450 aa7.06□□□□□ -1.28
XRN1-207ENST00000468894 DACT2Q5SW24 774 aa7.06□□□□□ -1.28
XRN1-207ENST00000468894 FAM102AQ5T9C2 384 aaPredicted RBP7.06□□□□□ -1.28
XRN1-207ENST00000468894 FNDC7Q5VTL7 733 aa7.06□□□□□ -1.28
XRN1-207ENST00000468894 IGFL4Q6B9Z1 124 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms