RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 TCHPQ9BT92 498 aa23.92■■□□□ 1.42
TTC28-204ENST00000468807 TTPALQ9BTX7 342 aa23.92■■□□□ 1.42
TTC28-204ENST00000468807 CCDC94Q9BW85 323 aaPredicted RBP23.92■■□□□ 1.42
TTC28-204ENST00000468807 NT5C3AQ9H0P0 336 aa23.92■■□□□ 1.42
TTC28-204ENST00000468807 PIDD1Q9HB75 910 aa23.92■■□□□ 1.42
TTC28-204ENST00000468807 FNIP2Q9P278 1114 aa23.92■■□□□ 1.42
TTC28-204ENST00000468807 MTCL1Q9Y4B5 1905 aaKnown RBP23.92■■□□□ 1.42
TTC28-204ENST00000468807 MAPK7Q13164 816 aa23.91■■□□□ 1.42
TTC28-204ENST00000468807 CMASQ8NFW8 434 aaPredicted RBP23.91■■□□□ 1.42
TTC28-204ENST00000468807 TARS2Q9BW92 718 aaKnown RBP23.91■■□□□ 1.42
TTC28-204ENST00000468807 CDT1Q9H211 546 aa23.91■■□□□ 1.42
TTC28-204ENST00000468807 TMEM134Q9H6X4 195 aa23.91■■□□□ 1.42
TTC28-204ENST00000468807 ARHGAP28Q9P2N2 729 aa23.91■■□□□ 1.42
TTC28-204ENST00000468807 RBM19Q9Y4C8 960 aaKnown RBP23.91■■□□□ 1.42
TTC28-204ENST00000468807 NAB2Q15742 525 aa23.9■■□□□ 1.42
TTC28-204ENST00000468807 PSMD5Q16401 504 aa23.9■■□□□ 1.42
TTC28-204ENST00000468807 IER5LQ5T953 404 aa23.9■■□□□ 1.42
TTC28-204ENST00000468807 TIPINQ9BVW5 301 aa23.9■■□□□ 1.42
TTC28-204ENST00000468807 PLEKHA4Q9H4M7 779 aa23.9■■□□□ 1.42
TTC28-204ENST00000468807 C17orf75Q9HAS0 396 aa23.9■■□□□ 1.42
TTC28-204ENST00000468807 TOPORSQ9NS56 1045 aaPredicted RBP23.9■■□□□ 1.42
TTC28-204ENST00000468807 B3GAT3O94766 335 aa23.89■■□□□ 1.41
TTC28-204ENST00000468807 PDGFBP01127 241 aaPredicted RBP23.89■■□□□ 1.41
TTC28-204ENST00000468807 PLA2G4BP0C869 781 aa23.89■■□□□ 1.41
TTC28-204ENST00000468807 GUCY2CP25092 1073 aa23.89■■□□□ 1.41
TTC28-204ENST00000468807 GBP2P32456 591 aaPredicted RBP23.89■■□□□ 1.41
TTC28-204ENST00000468807 GRM5P41594 1212 aa23.89■■□□□ 1.41
TTC28-204ENST00000468807 CLCNKBP51801 687 aa23.89■■□□□ 1.41
TTC28-204ENST00000468807 CACNB1Q02641 598 aaPredicted RBP23.89■■□□□ 1.41
TTC28-204ENST00000468807 ELAVL2Q12926 359 aaKnown RBP23.89■■□□□ 1.41
TTC28-204ENST00000468807 STRN3Q13033 797 aa23.89■■□□□ 1.41
TTC28-204ENST00000468807 HYIQ5T013 277 aa23.89■■□□□ 1.41
TTC28-204ENST00000468807 ARL6IP4Q66PJ3 421 aaKnown RBP23.89■■□□□ 1.41
TTC28-204ENST00000468807 TAS1R3Q7RTX0 852 aa23.89■■□□□ 1.41
TTC28-204ENST00000468807 GPR65Q8IYL9 337 aa23.89■■□□□ 1.41
TTC28-204ENST00000468807 HDAC7Q8WUI4 952 aa23.89■■□□□ 1.41
TTC28-204ENST00000468807 STAMQ92783 540 aa23.89■■□□□ 1.41
TTC28-204ENST00000468807 GOLGA2P5Q9HBQ8 144 aa23.89■■□□□ 1.41
TTC28-204ENST00000468807 ANKFY1Q9P2R3 1169 aa23.89■■□□□ 1.41
TTC28-204ENST00000468807 CLUHO75153 1309 aa23.88■■□□□ 1.41
TTC28-204ENST00000468807 KMT2EQ8IZD2 1858 aa23.88■■□□□ 1.41
TTC28-204ENST00000468807 HOXD11P31277 338 aaPredicted RBP23.88■■□□□ 1.41
TTC28-204ENST00000468807 SMTNP53814 917 aa23.88■■□□□ 1.41
TTC28-204ENST00000468807 VCPP55072 806 aaKnown RBP23.88■■□□□ 1.41
TTC28-204ENST00000468807 NHLH1Q02575 133 aa23.88■■□□□ 1.41
TTC28-204ENST00000468807 CYP26C1Q6V0L0 522 aa23.88■■□□□ 1.41
TTC28-204ENST00000468807 SYT2Q8N9I0 419 aaPredicted RBP23.88■■□□□ 1.41
TTC28-204ENST00000468807 LNX1Q8TBB1 728 aaPredicted RBP23.88■■□□□ 1.41
TTC28-204ENST00000468807 PIK3R5Q8WYR1 880 aa23.88■■□□□ 1.41
TTC28-204ENST00000468807 PPP1R10Q96QC0 940 aaKnown RBP23.88■■□□□ 1.41
TTC28-204ENST00000468807 WDR6Q9NNW5 1121 aaKnown RBP23.88■■□□□ 1.41
TTC28-204ENST00000468807 DAXXQ9UER7 740 aaPredicted RBP23.88■■□□□ 1.41
TTC28-204ENST00000468807 VWA8A3KMH1 1905 aa23.88■■□□□ 1.41
TTC28-204ENST00000468807 NPHP3-ACAD11A0A0J9YXS1 232 aa23.87■■□□□ 1.41
TTC28-204ENST00000468807 SMIM28A0A1B0GU29 152 aa23.87■■□□□ 1.41
TTC28-204ENST00000468807 VPS37CA5D8V6 355 aaPredicted RBP23.87■■□□□ 1.41
TTC28-204ENST00000468807 MCF2P10911 925 aa23.87■■□□□ 1.41
TTC28-204ENST00000468807 PLS3P13797 630 aa23.87■■□□□ 1.41
TTC28-204ENST00000468807 SLC12A3P55017 1021 aa23.87■■□□□ 1.41
TTC28-204ENST00000468807 LIN9Q5TKA1 542 aa23.87■■□□□ 1.41
TTC28-204ENST00000468807 LILRA6Q6PI73 481 aa23.87■■□□□ 1.41
TTC28-204ENST00000468807 MPZL3Q6UWV2 235 aa23.87■■□□□ 1.41
TTC28-204ENST00000468807 RASSF8Q8NHQ8 419 aa23.87■■□□□ 1.41
TTC28-204ENST00000468807 UROC1Q96N76 676 aa23.87■■□□□ 1.41
TTC28-204ENST00000468807 CLSTN3Q9BQT9 956 aa23.87■■□□□ 1.41
TTC28-204ENST00000468807 PTPRHQ9HD43 1115 aa23.87■■□□□ 1.41
TTC28-204ENST00000468807 ZDHHC7Q9NXF8 308 aa23.87■■□□□ 1.41
TTC28-204ENST00000468807 CITO14578 2027 aa23.86■■□□□ 1.41
TTC28-204ENST00000468807 UBA7P41226 1012 aa23.86■■□□□ 1.41
TTC28-204ENST00000468807 MATR3P43243 847 aaKnown RBP eCLIP23.86■■□□□ 1.41
TTC28-204ENST00000468807 DHX8Q14562 1220 aaKnown RBP23.86■■□□□ 1.41
TTC28-204ENST00000468807 TMEM119Q4V9L6 283 aa23.86■■□□□ 1.41
TTC28-204ENST00000468807 PDXDC1Q6P996 788 aa23.86■■□□□ 1.41
TTC28-204ENST00000468807 DCLRE1AQ6PJP8 1040 aa23.86■■□□□ 1.41
TTC28-204ENST00000468807 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.86■■□□□ 1.41
TTC28-204ENST00000468807 ALYREFQ86V81 257 aaKnown RBP23.86■■□□□ 1.41
TTC28-204ENST00000468807 KCTD17Q8N5Z5 321 aa23.86■■□□□ 1.41
TTC28-204ENST00000468807 PRSS33Q8NF86 280 aa23.86■■□□□ 1.41
TTC28-204ENST00000468807 ZNF707Q96C28 371 aaPredicted RBP23.86■■□□□ 1.41
TTC28-204ENST00000468807 CALML4Q96GE6 196 aa23.86■■□□□ 1.41
TTC28-204ENST00000468807 AK8Q96MA6 479 aa23.86■■□□□ 1.41
TTC28-204ENST00000468807 ACAP3Q96P50 834 aa23.86■■□□□ 1.41
TTC28-204ENST00000468807 PRKD2Q9BZL6 878 aa23.86■■□□□ 1.41
TTC28-204ENST00000468807 KCNG1Q9UIX4 513 aa23.86■■□□□ 1.41
TTC28-204ENST00000468807 C1RP00736 705 aa23.85■■□□□ 1.41
TTC28-204ENST00000468807 IGFBP6P24592 240 aaPredicted RBP23.85■■□□□ 1.41
TTC28-204ENST00000468807 UPP1Q16831 310 aa23.85■■□□□ 1.41
TTC28-204ENST00000468807 GET4Q7L5D6 327 aaPredicted RBP23.85■■□□□ 1.41
TTC28-204ENST00000468807 BRAPQ7Z569 592 aa23.85■■□□□ 1.41
TTC28-204ENST00000468807 SPIRE2Q8WWL2 714 aa23.85■■□□□ 1.41
TTC28-204ENST00000468807 ZBTB45Q96K62 511 aaPredicted RBP23.85■■□□□ 1.41
TTC28-204ENST00000468807 MFSD1Q9H3U5 465 aa23.85■■□□□ 1.41
TTC28-204ENST00000468807 KCNK12Q9HB15 430 aa23.85■■□□□ 1.41
TTC28-204ENST00000468807 SLC38A7Q9NVC3 462 aa23.85■■□□□ 1.41
TTC28-204ENST00000468807 KCND2Q9NZV8 630 aa23.85■■□□□ 1.41
TTC28-204ENST00000468807 PIEZO1Q92508 2521 aa23.85■■□□□ 1.41
TTC28-204ENST00000468807 TMEM189-UBE2V1I3L0A0 370 aa23.84■■□□□ 1.41
TTC28-204ENST00000468807 I3L4J1 428 aa23.84■■□□□ 1.41
TTC28-204ENST00000468807 ADAM12O43184 909 aa23.84■■□□□ 1.41
TTC28-204ENST00000468807 TRAPPC3O43617 180 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms