RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 SIM1P81133 766 aaPredicted RBP4.88□□□□□ -1.63
SSB-208ENST00000468600 ZNF169Q14929 603 aaPredicted RBP4.88□□□□□ -1.63
SSB-208ENST00000468600 SPDYE7PQ495Y7 208 aa4.88□□□□□ -1.63
SSB-208ENST00000468600 DALRD3Q5D0E6 543 aaKnown RBP4.88□□□□□ -1.63
SSB-208ENST00000468600 PITRM1Q5JRX3 1037 aa4.88□□□□□ -1.63
SSB-208ENST00000468600 FAM102AQ5T9C2 384 aaPredicted RBP4.88□□□□□ -1.63
SSB-208ENST00000468600 ANKS6Q68DC2 871 aa4.88□□□□□ -1.63
SSB-208ENST00000468600 ANKS1AQ92625 1134 aa4.88□□□□□ -1.63
SSB-208ENST00000468600 SLC5A5Q92911 643 aa4.88□□□□□ -1.63
SSB-208ENST00000468600 MFSD3Q96ES6 412 aa4.88□□□□□ -1.63
SSB-208ENST00000468600 PRDM12Q9H4Q4 367 aa4.88□□□□□ -1.63
SSB-208ENST00000468600 ALG13Q9NP73 1137 aaKnown RBP4.88□□□□□ -1.63
SSB-208ENST00000468600 KMT5AQ9NQR1 393 aa4.88□□□□□ -1.63
SSB-208ENST00000468600 LRIT1Q9P2V4 623 aa4.88□□□□□ -1.63
SSB-208ENST00000468600 PJA2O43164 708 aa4.87□□□□□ -1.63
SSB-208ENST00000468600 PRAMEF4O60810 478 aa4.87□□□□□ -1.63
SSB-208ENST00000468600 RAB11FIP3O75154 756 aa4.87□□□□□ -1.63
SSB-208ENST00000468600 FLT3LGP49771 235 aa4.87□□□□□ -1.63
SSB-208ENST00000468600 Q6ZNX1 250 aa4.87□□□□□ -1.63
SSB-208ENST00000468600 DHX37Q8IY37 1157 aaKnown RBP4.87□□□□□ -1.63
SSB-208ENST00000468600 ZNF366Q8N895 744 aa4.87□□□□□ -1.63
SSB-208ENST00000468600 RNF169Q8NCN4 708 aa4.87□□□□□ -1.63
SSB-208ENST00000468600 ZFP28Q8NHY6 868 aa4.87□□□□□ -1.63
SSB-208ENST00000468600 Q96MF0 132 aa4.87□□□□□ -1.63
SSB-208ENST00000468600 C1QTNF7Q9BXJ2 289 aa4.87□□□□□ -1.63
SSB-208ENST00000468600 ATP11BQ9Y2G3 1177 aa4.87□□□□□ -1.63
SSB-208ENST00000468600 RPTORQ8N122 1335 aa4.87□□□□□ -1.63
SSB-208ENST00000468600 GSG1L2A8MUP6 293 aa4.86□□□□□ -1.63
SSB-208ENST00000468600 PHF2O75151 1096 aa4.86□□□□□ -1.63
SSB-208ENST00000468600 ZFPL1O95159 310 aa4.86□□□□□ -1.63
SSB-208ENST00000468600 CFIP05156 583 aa4.86□□□□□ -1.63
SSB-208ENST00000468600 RARRES1P49788 294 aa4.86□□□□□ -1.63
SSB-208ENST00000468600 CACNA2D1P54289 1103 aa4.86□□□□□ -1.63
SSB-208ENST00000468600 GJC2Q5T442 439 aaPredicted RBP4.86□□□□□ -1.63
SSB-208ENST00000468600 KIAA0907Q7Z7F0 614 aaPredicted RBP4.86□□□□□ -1.63
SSB-208ENST00000468600 ZNF480Q8WV37 535 aa4.86□□□□□ -1.63
SSB-208ENST00000468600 CEP95Q96GE4 821 aa4.86□□□□□ -1.63
SSB-208ENST00000468600 KCTD10Q9H3F6 313 aa4.86□□□□□ -1.63
SSB-208ENST00000468600 NOC2LQ9Y3T9 749 aaKnown RBP4.86□□□□□ -1.63
SSB-208ENST00000468600 NOX1Q9Y5S8 564 aa4.86□□□□□ -1.63
SSB-208ENST00000468600 COL3A1P02461 1466 aaPredicted RBP4.86□□□□□ -1.63
SSB-208ENST00000468600 PROP1O75360 226 aa4.85□□□□□ -1.63
SSB-208ENST00000468600 CDC45O75419 566 aa4.85□□□□□ -1.63
SSB-208ENST00000468600 BPIP17213 487 aa4.85□□□□□ -1.63
SSB-208ENST00000468600 LGALS4P56470 323 aa4.85□□□□□ -1.63
SSB-208ENST00000468600 SRSF4Q08170 494 aaKnown RBP4.85□□□□□ -1.63
SSB-208ENST00000468600 FSCN1Q16658 493 aaKnown RBP4.85□□□□□ -1.63
SSB-208ENST00000468600 MST1LQ2TV78 715 aa4.85□□□□□ -1.63
SSB-208ENST00000468600 FAM47AQ5JRC9 791 aa4.85□□□□□ -1.63
SSB-208ENST00000468600 MFSD14BQ5SR56 506 aa4.85□□□□□ -1.63
SSB-208ENST00000468600 LCE1EQ5T753 118 aa4.85□□□□□ -1.63
SSB-208ENST00000468600 AGAP9Q5VTM2 703 aa4.85□□□□□ -1.63
SSB-208ENST00000468600 C1QL2Q7Z5L3 287 aa4.85□□□□□ -1.63
SSB-208ENST00000468600 RHOT2Q8IXI1 618 aa4.85□□□□□ -1.63
SSB-208ENST00000468600 FUBP1Q96AE4 644 aaKnown RBP4.85□□□□□ -1.63
SSB-208ENST00000468600 HEPHQ9BQS7 1158 aa4.85□□□□□ -1.63
SSB-208ENST00000468600 SLC17A6Q9P2U8 582 aa4.85□□□□□ -1.63
SSB-208ENST00000468600 MAPRE3Q9UPY8 281 aa4.85□□□□□ -1.63
SSB-208ENST00000468600 SALL3Q9BXA9 1300 aa4.84□□□□□ -1.63
SSB-208ENST00000468600 A0A087X0B3 334 aa4.84□□□□□ -1.63
SSB-208ENST00000468600 LRRC3CA6NJW4 275 aa4.84□□□□□ -1.63
SSB-208ENST00000468600 DRGXA6NNA5 263 aa4.84□□□□□ -1.63
SSB-208ENST00000468600 MGST3O14880 152 aa4.84□□□□□ -1.63
SSB-208ENST00000468600 C1QL1O75973 258 aa4.84□□□□□ -1.63
SSB-208ENST00000468600 MRPS35P82673 323 aaKnown RBP4.84□□□□□ -1.63
SSB-208ENST00000468600 PDCD1Q15116 288 aa4.84□□□□□ -1.63
SSB-208ENST00000468600 DHCR24Q15392 516 aa4.84□□□□□ -1.63
SSB-208ENST00000468600 ATP13A4Q4VNC1 1196 aa4.84□□□□□ -1.63
SSB-208ENST00000468600 PRAMEF14Q5SWL7 426 aa4.84□□□□□ -1.63
SSB-208ENST00000468600 GPR149Q86SP6 731 aa4.84□□□□□ -1.63
SSB-208ENST00000468600 MDM1Q8TC05 714 aa4.84□□□□□ -1.63
SSB-208ENST00000468600 ACTRT2Q8TDY3 377 aa4.84□□□□□ -1.63
SSB-208ENST00000468600 ACAP3Q96P50 834 aa4.84□□□□□ -1.63
SSB-208ENST00000468600 NEU1Q99519 415 aa4.84□□□□□ -1.63
SSB-208ENST00000468600 ALOXE3Q9BYJ1 711 aa4.84□□□□□ -1.63
SSB-208ENST00000468600 TBCCD1Q9NVR7 557 aa4.84□□□□□ -1.63
SSB-208ENST00000468600 FAM30AQ9NZY2 134 aa4.84□□□□□ -1.63
SSB-208ENST00000468600 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.83□□□□□ -1.64
SSB-208ENST00000468600 ZEB2O60315 1214 aa4.83□□□□□ -1.64
SSB-208ENST00000468600 CLRN1P58418 232 aa4.83□□□□□ -1.64
SSB-208ENST00000468600 SCAPQ12770 1279 aa4.83□□□□□ -1.64
SSB-208ENST00000468600 ZNF572Q7Z3I7 529 aaPredicted RBP4.83□□□□□ -1.64
SSB-208ENST00000468600 MAPKAPK5Q8IW41 473 aa4.83□□□□□ -1.64
SSB-208ENST00000468600 Q8N9P0 234 aaPredicted RBP4.83□□□□□ -1.64
SSB-208ENST00000468600 OR56A1Q8NGH5 318 aa4.83□□□□□ -1.64
SSB-208ENST00000468600 RAX2Q96IS3 184 aa4.83□□□□□ -1.64
SSB-208ENST00000468600 ZNF778Q96MU6 729 aa4.83□□□□□ -1.64
SSB-208ENST00000468600 KLK15Q9H2R5 256 aa4.83□□□□□ -1.64
SSB-208ENST00000468600 CASS4Q9NQ75 786 aa4.83□□□□□ -1.64
SSB-208ENST00000468600 ATRNL1Q5VV63 1379 aa4.82□□□□□ -1.64
SSB-208ENST00000468600 LPLP06858 475 aa4.82□□□□□ -1.64
SSB-208ENST00000468600 SNRPA1P09661 255 aaKnown RBP4.82□□□□□ -1.64
SSB-208ENST00000468600 HOXB6P17509 224 aaKnown RBP4.82□□□□□ -1.64
SSB-208ENST00000468600 ENPP1P22413 925 aa4.82□□□□□ -1.64
SSB-208ENST00000468600 CHN2P52757 468 aa4.82□□□□□ -1.64
SSB-208ENST00000468600 SESN3P58005 492 aa4.82□□□□□ -1.64
SSB-208ENST00000468600 UGT8Q16880 541 aa4.82□□□□□ -1.64
SSB-208ENST00000468600 CT83Q5H943 113 aa4.82□□□□□ -1.64
SSB-208ENST00000468600 ATXN7L2Q5T6C5 722 aaPredicted RBP4.82□□□□□ -1.64
SSB-208ENST00000468600 OR7D4Q8NG98 312 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms