RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 PPP1R11O60927 126 aaPredicted RBP4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 FKTNO75072 461 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 KCNH1O95259 989 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 CETPP11597 493 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 ALAS1P13196 640 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 RPL10P27635 214 aaKnown RBP4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 DDIT3P35638 169 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 KRT2P35908 639 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 GTF2A2P52657 109 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 DUSP4Q13115 394 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 PABPC4Q13310 644 aaKnown RBP eCLIP4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 UBE2SQ16763 222 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 ZNF792Q3KQV3 632 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 GTF2IRD2BQ6EKJ0 949 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 CYP4F22Q6NT55 531 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 BTNL9Q6UXG8 535 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 SPATC1Q76KD6 591 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 PRRT2Q7Z6L0 340 aaPredicted RBP4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 SAPCD2Q86UD0 394 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 GTF2IRD2Q86UP8 949 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 RASAL3Q86YV0 1011 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 DIS3L2Q8IYB7 885 aaKnown RBP4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 ABI1Q8IZP0 508 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 BLIDQ8IZY5 108 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 CCDC148Q8NFR7 591 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 CCDC12Q8WUD4 166 aaPredicted RBP4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 TBC1D5Q92609 795 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 PGBD1Q96JS3 809 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 FCRL2Q96LA5 508 aaPredicted RBP4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 C12orf42Q96LP6 360 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 CDADC1Q9BWV3 514 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 LGR4Q9BXB1 951 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 AMNQ9BXJ7 453 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 RANBP17Q9H2T7 1088 aaKnown RBP4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 PSTPIP2Q9H939 334 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 PRDM7Q9NQW5 492 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 HOMER2Q9NSB8 354 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 MBNL3Q9NUK0 354 aaKnown RBP4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 TMEM260Q9NX78 707 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 BARHL2Q9NY43 387 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 ZMYM5Q9UJ78 669 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 TMEM59LQ9UK28 342 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 ADAMTS6Q9UKP5 1117 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 CCPG1Q9ULG6 757 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 SYNPO2Q9UMS6 1093 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 GPR55Q9Y2T6 319 aaPredicted RBP4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 OAS3Q9Y6K5 1087 aaKnown RBP4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 PASKQ96RG2 1323 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 BAZ2BQ9UIF8 2168 aaKnown RBP4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 NID2Q14112 1375 aa4.64□□□□□ -1.67
TMEM39A-204ENST00000468545 ATAD5Q96QE3 1844 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 DNAJC25-GNG10A0A024R161 153 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 CCDC194A0A1B0GVG4 234 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 BTBD19C9JJ37 291 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 PDHXO00330 501 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 VWA5AO00534 786 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 AURKAO14965 403 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 TBX1O43435 398 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 PLA2G6O60733 806 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 BAG4O95429 457 aaKnown RBP4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 CFBP00751 764 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 MMP1P03956 469 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 RNASE1P07998 156 aaKnown RBP4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 GSTM1P09488 218 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 CYP2C8P10632 490 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 IFNGR1P15260 489 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 CALML3P27482 149 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 GNA11P29992 359 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 HOXA13P31271 388 aaPredicted RBP4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 STAT3P40763 770 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 IRAK1P51617 712 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 ADCY7P51828 1080 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 MRPL12P52815 198 aaKnown RBP4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 PPP2R2AP63151 447 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 HTRA3P83110 453 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 KIF23Q02241 960 aaPredicted RBP4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 FSTL1Q12841 308 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 RESTQ13127 1097 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 HSP90AA2PQ14568 343 aaPredicted RBP4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 TMEM132BQ14DG7 1078 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 ZNF174Q15697 407 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 DPY19L1Q2PZI1 675 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 DEFB115Q30KQ5 88 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 RALGPS1Q5JS13 557 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 RTP2Q5QGT7 225 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 WDR78Q5VTH9 848 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 SNRNP48Q6IEG0 339 aaKnown RBP4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 USP17L6PQ6QN14 398 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 CYP2R1Q6VVX0 501 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 NSMFQ6X4W1 530 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 PIK3AP1Q6ZUJ8 805 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 CCAR1Q8IX12 1150 aaKnown RBP4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 SMCR8Q8TEV9 937 aaPredicted RBP4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 BTN2A2Q8WVV5 523 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 BRI3BPQ8WY22 251 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 CUL5Q93034 780 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 SHISA4Q96DD7 197 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 MTMR8Q96EF0 704 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 ZNF396Q96N95 335 aaPredicted RBP4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 FCRL3Q96P31 734 aaPredicted RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms