RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 PRPF4BQ13523 1007 aaKnown RBP8.95□□□□□ -0.98
BRCA1-208ENST00000468300 KIF22Q14807 665 aa8.95□□□□□ -0.98
BRCA1-208ENST00000468300 KCNA10Q16322 511 aa8.95□□□□□ -0.98
BRCA1-208ENST00000468300 KIZQ2M2Z5 673 aa8.95□□□□□ -0.98
BRCA1-208ENST00000468300 TDRD10Q5VZ19 366 aaKnown RBP8.95□□□□□ -0.98
BRCA1-208ENST00000468300 GDF6Q6KF10 455 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-208ENST00000468300 MPZL3Q6UWV2 235 aa8.95□□□□□ -0.98
BRCA1-208ENST00000468300 ZBTB33Q86T24 672 aa8.95□□□□□ -0.98
BRCA1-208ENST00000468300 ZBTB8OSQ8IWT0 167 aa8.95□□□□□ -0.98
BRCA1-208ENST00000468300 OSBPL7Q9BZF2 842 aa8.95□□□□□ -0.98
BRCA1-208ENST00000468300 CXCL16Q9H2A7 254 aa8.95□□□□□ -0.98
BRCA1-208ENST00000468300 TMEM8AQ9HCN3 771 aa8.95□□□□□ -0.98
BRCA1-208ENST00000468300 GTF2IRD1Q9UHL9 959 aa8.95□□□□□ -0.98
BRCA1-208ENST00000468300 NENFQ9UMX5 172 aa8.95□□□□□ -0.98
BRCA1-208ENST00000468300 INO80B-WBP1J3KQ70 363 aa8.95□□□□□ -0.98
BRCA1-208ENST00000468300 CLDN3O15551 220 aa8.95□□□□□ -0.98
BRCA1-208ENST00000468300 CREB3O43889 395 aa8.95□□□□□ -0.98
BRCA1-208ENST00000468300 GNRH1P01148 92 aa8.95□□□□□ -0.98
BRCA1-208ENST00000468300 ASGR1P07306 291 aa8.95□□□□□ -0.98
BRCA1-208ENST00000468300 KRT13P13646 458 aa8.95□□□□□ -0.98
BRCA1-208ENST00000468300 LMBRD2Q68DH5 695 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-208ENST00000468300 ZNF410Q86VK4 478 aa8.95□□□□□ -0.98
BRCA1-208ENST00000468300 OR5B17Q8NGF7 314 aa8.95□□□□□ -0.98
BRCA1-208ENST00000468300 HELQQ8TDG4 1101 aa8.95□□□□□ -0.98
BRCA1-208ENST00000468300 TAS1R2Q8TE23 839 aa8.95□□□□□ -0.98
BRCA1-208ENST00000468300 DNAJB3Q8WWF6 145 aa8.95□□□□□ -0.98
BRCA1-208ENST00000468300 KAT5Q92993 513 aa8.95□□□□□ -0.98
BRCA1-208ENST00000468300 INO80BQ9C086 356 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-208ENST00000468300 KIAA1586Q9HCI6 787 aa8.95□□□□□ -0.98
BRCA1-208ENST00000468300 XPNPEP3Q9NQH7 507 aa8.95□□□□□ -0.98
BRCA1-208ENST00000468300 TSKSQ9UJT2 592 aa8.95□□□□□ -0.98
BRCA1-208ENST00000468300 TFR2Q9UP52 801 aa8.95□□□□□ -0.98
BRCA1-208ENST00000468300 A0A1B0GUA9 196 aa8.94□□□□□ -0.98
BRCA1-208ENST00000468300 NDUFA10O95299 355 aa8.94□□□□□ -0.98
BRCA1-208ENST00000468300 RARBP10826 455 aa8.94□□□□□ -0.98
BRCA1-208ENST00000468300 CYP2C9P11712 490 aa8.94□□□□□ -0.98
BRCA1-208ENST00000468300 TMOD1P28289 359 aa8.94□□□□□ -0.98
BRCA1-208ENST00000468300 PHKA2P46019 1235 aa8.94□□□□□ -0.98
BRCA1-208ENST00000468300 ZRSR2Q15696 482 aaKnown RBP8.94□□□□□ -0.98
BRCA1-208ENST00000468300 ENOX2Q16206 610 aaKnown RBP8.94□□□□□ -0.98
BRCA1-208ENST00000468300 ZACNQ401N2 412 aa8.94□□□□□ -0.98
BRCA1-208ENST00000468300 SESTD1Q86VW0 696 aa8.94□□□□□ -0.98
BRCA1-208ENST00000468300 KCNV2Q8TDN2 545 aa8.94□□□□□ -0.98
BRCA1-208ENST00000468300 KREMEN1Q96MU8 473 aa8.94□□□□□ -0.98
BRCA1-208ENST00000468300 MTG1Q9BT17 334 aaPredicted RBP8.94□□□□□ -0.98
BRCA1-208ENST00000468300 YY1AP1Q9H869 796 aa8.94□□□□□ -0.98
BRCA1-208ENST00000468300 PRMT7Q9NVM4 692 aaPredicted RBP8.94□□□□□ -0.98
BRCA1-208ENST00000468300 RBAKQ9NYW8 714 aaPredicted RBP8.94□□□□□ -0.98
BRCA1-208ENST00000468300 APEX2Q9UBZ4 518 aa8.94□□□□□ -0.98
BRCA1-208ENST00000468300 DDX20Q9UHI6 824 aaKnown RBP8.94□□□□□ -0.98
BRCA1-208ENST00000468300 TRIP11Q15643 1979 aa8.94□□□□□ -0.98
BRCA1-208ENST00000468300 C17orf102A2RUQ5 167 aa8.94□□□□□ -0.98
BRCA1-208ENST00000468300 F8VZ95 297 aa8.94□□□□□ -0.98
BRCA1-208ENST00000468300 OGTO15294 1046 aa8.94□□□□□ -0.98
BRCA1-208ENST00000468300 KPNA6O60684 536 aa8.94□□□□□ -0.98
BRCA1-208ENST00000468300 FKTNO75072 461 aa8.94□□□□□ -0.98
BRCA1-208ENST00000468300 TPM1P09493 284 aa8.94□□□□□ -0.98
BRCA1-208ENST00000468300 CALRP27797 417 aaKnown RBP8.94□□□□□ -0.98
BRCA1-208ENST00000468300 DMTNQ08495 405 aa8.94□□□□□ -0.98
BRCA1-208ENST00000468300 BRSK2Q8IWQ3 736 aa8.94□□□□□ -0.98
BRCA1-208ENST00000468300 NLRP7Q8WX94 980 aa8.94□□□□□ -0.98
BRCA1-208ENST00000468300 PRIMPOLQ96LW4 560 aa8.94□□□□□ -0.98
BRCA1-208ENST00000468300 KATNAL1Q9BW62 490 aa8.94□□□□□ -0.98
BRCA1-208ENST00000468300 EPN1Q9Y6I3 576 aaPredicted RBP8.94□□□□□ -0.98
BRCA1-208ENST00000468300 MKI67P46013 3256 aaKnown RBP8.94□□□□□ -0.98
BRCA1-208ENST00000468300 OFD1O75665 1012 aa8.93□□□□□ -0.98
BRCA1-208ENST00000468300 LDHAP00338 332 aaKnown RBP8.93□□□□□ -0.98
BRCA1-208ENST00000468300 DLATP10515 647 aaKnown RBP8.93□□□□□ -0.98
BRCA1-208ENST00000468300 DARSP14868 501 aaKnown RBP8.93□□□□□ -0.98
BRCA1-208ENST00000468300 CHMP4BP1P59074 171 aa8.93□□□□□ -0.98
BRCA1-208ENST00000468300 KRT39Q6A163 491 aa8.93□□□□□ -0.98
BRCA1-208ENST00000468300 SRGAP1Q7Z6B7 1085 aa8.93□□□□□ -0.98
BRCA1-208ENST00000468300 EFCAB13Q8IY85 973 aa8.93□□□□□ -0.98
BRCA1-208ENST00000468300 FAM49AQ9H0Q0 323 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-208ENST00000468300 DNAJC12Q9UKB3 198 aa8.93□□□□□ -0.98
BRCA1-208ENST00000468300 MYO6Q9UM54 1294 aa8.93□□□□□ -0.98
BRCA1-208ENST00000468300 INHAP05111 366 aa8.93□□□□□ -0.98
BRCA1-208ENST00000468300 EIF4A3P38919 411 aaKnown RBP8.93□□□□□ -0.98
BRCA1-208ENST00000468300 PRKCIP41743 596 aa8.93□□□□□ -0.98
BRCA1-208ENST00000468300 MXI1P50539 228 aa8.93□□□□□ -0.98
BRCA1-208ENST00000468300 MGAT3Q09327 533 aa8.93□□□□□ -0.98
BRCA1-208ENST00000468300 ZNF571Q7Z3V5 609 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-208ENST00000468300 ZNF397Q8NF99 534 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-208ENST00000468300 TATDN2Q93075 761 aa8.93□□□□□ -0.98
BRCA1-208ENST00000468300 ERO1AQ96HE7 468 aa8.93□□□□□ -0.98
BRCA1-208ENST00000468300 C16orf45Q96MC5 204 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-208ENST00000468300 OSMRQ99650 979 aa8.93□□□□□ -0.98
BRCA1-208ENST00000468300 CGRRF1Q99675 332 aa8.93□□□□□ -0.98
BRCA1-208ENST00000468300 STK33Q9BYT3 514 aa8.93□□□□□ -0.98
BRCA1-208ENST00000468300 APOBEC3GQ9HC16 384 aaKnown RBP8.93□□□□□ -0.98
BRCA1-208ENST00000468300 PTCH2Q9Y6C5 1203 aa8.93□□□□□ -0.98
BRCA1-208ENST00000468300 EIF3CLB5ME19 914 aaKnown RBP8.93□□□□□ -0.98
BRCA1-208ENST00000468300 HOXD10P28358 340 aa8.93□□□□□ -0.98
BRCA1-208ENST00000468300 SFMBT2Q5VUG0 894 aa8.93□□□□□ -0.98
BRCA1-208ENST00000468300 SERINC5Q86VE9 423 aa8.93□□□□□ -0.98
BRCA1-208ENST00000468300 CCDC170Q8IYT3 715 aa8.93□□□□□ -0.98
BRCA1-208ENST00000468300 C7orf31Q8N865 590 aa8.93□□□□□ -0.98
BRCA1-208ENST00000468300 DHX38Q92620 1227 aaKnown RBP8.93□□□□□ -0.98
BRCA1-208ENST00000468300 EIF3CQ99613 913 aaKnown RBP8.93□□□□□ -0.98
BRCA1-208ENST00000468300 PI4K2AQ9BTU6 479 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms