RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 TAS1R3Q7RTX0 852 aa26.94■■□□□ 1.9
PTCH1-210ENST00000468211 CEP120Q8N960 986 aa26.94■■□□□ 1.9
PTCH1-210ENST00000468211 PIK3R5Q8WYR1 880 aa26.94■■□□□ 1.9
PTCH1-210ENST00000468211 PPP1R10Q96QC0 940 aaKnown RBP26.94■■□□□ 1.9
PTCH1-210ENST00000468211 CITO14578 2027 aa26.94■■□□□ 1.9
PTCH1-210ENST00000468211 NARSO43776 548 aaKnown RBP26.93■■□□□ 1.9
PTCH1-210ENST00000468211 HIP1RO75146 1068 aa26.93■■□□□ 1.9
PTCH1-210ENST00000468211 CD2BP2O95400 341 aaKnown RBP26.93■■□□□ 1.9
PTCH1-210ENST00000468211 CD300LGQ6UXG3 332 aa26.93■■□□□ 1.9
PTCH1-210ENST00000468211 RAB34Q9BZG1 259 aa26.93■■□□□ 1.9
PTCH1-210ENST00000468211 PRKD2Q9BZL6 878 aa26.93■■□□□ 1.9
PTCH1-210ENST00000468211 PIDD1Q9HB75 910 aa26.93■■□□□ 1.9
PTCH1-210ENST00000468211 ZDHHC7Q9NXF8 308 aa26.93■■□□□ 1.9
PTCH1-210ENST00000468211 DUSP12Q9UNI6 340 aa26.93■■□□□ 1.9
PTCH1-210ENST00000468211 DNM3Q9UQ16 869 aa26.93■■□□□ 1.9
PTCH1-210ENST00000468211 TNFSF13BQ9Y275 285 aa26.93■■□□□ 1.9
PTCH1-210ENST00000468211 CCDC169A6NNP5 214 aa26.92■■□□□ 1.9
PTCH1-210ENST00000468211 H0Y858 1186 aa26.92■■□□□ 1.9
PTCH1-210ENST00000468211 ZMYND10O75800 440 aa26.92■■□□□ 1.9
PTCH1-210ENST00000468211 PRPHP41219 470 aa26.92■■□□□ 1.9
PTCH1-210ENST00000468211 CREMQ03060 361 aa26.92■■□□□ 1.9
PTCH1-210ENST00000468211 RABEP1Q15276 862 aa26.92■■□□□ 1.9
PTCH1-210ENST00000468211 PSMD5Q16401 504 aa26.92■■□□□ 1.9
PTCH1-210ENST00000468211 KRT79Q5XKE5 535 aa26.92■■□□□ 1.9
PTCH1-210ENST00000468211 CWF19L1Q69YN2 538 aaKnown RBP26.92■■□□□ 1.9
PTCH1-210ENST00000468211 RINT1Q6NUQ1 792 aa26.92■■□□□ 1.9
PTCH1-210ENST00000468211 ACO2Q99798 780 aaKnown RBP26.92■■□□□ 1.9
PTCH1-210ENST00000468211 CDT1Q9H211 546 aa26.92■■□□□ 1.9
PTCH1-210ENST00000468211 GOLGA2P5Q9HBQ8 144 aa26.92■■□□□ 1.9
PTCH1-210ENST00000468211 FBXW11Q9UKB1 542 aa26.92■■□□□ 1.9
PTCH1-210ENST00000468211 STK24Q9Y6E0 443 aa26.92■■□□□ 1.9
PTCH1-210ENST00000468211 NOTCH4Q99466 2003 aa26.91■■□□□ 1.9
PTCH1-210ENST00000468211 LAD1O00515 517 aa26.91■■□□□ 1.9
PTCH1-210ENST00000468211 GALR2O43603 387 aaPredicted RBP26.91■■□□□ 1.9
PTCH1-210ENST00000468211 NPR3P17342 541 aa26.91■■□□□ 1.9
PTCH1-210ENST00000468211 MCTP1Q6DN14 999 aa26.91■■□□□ 1.9
PTCH1-210ENST00000468211 ASTLQ6HA08 431 aaPredicted RBP26.91■■□□□ 1.9
PTCH1-210ENST00000468211 DTHD1Q6ZMT9 781 aa26.91■■□□□ 1.9
PTCH1-210ENST00000468211 C1orf186Q6ZWK4 172 aa26.91■■□□□ 1.9
PTCH1-210ENST00000468211 STAMQ92783 540 aa26.91■■□□□ 1.9
PTCH1-210ENST00000468211 TMX3Q96JJ7 454 aa26.91■■□□□ 1.9
PTCH1-210ENST00000468211 MFSD1Q9H3U5 465 aa26.91■■□□□ 1.9
PTCH1-210ENST00000468211 PTPRHQ9HD43 1115 aa26.91■■□□□ 1.9
PTCH1-210ENST00000468211 IGSF9Q9P2J2 1179 aa26.91■■□□□ 1.9
PTCH1-210ENST00000468211 EPS15L1Q9UBC2 864 aa26.91■■□□□ 1.9
PTCH1-210ENST00000468211 PHLPP2Q6ZVD8 1323 aa26.9■■□□□ 1.9
PTCH1-210ENST00000468211 PDCD11Q14690 1871 aaKnown RBP26.9■■□□□ 1.9
PTCH1-210ENST00000468211 SFI1A8K8P3 1242 aa26.9■■□□□ 1.9
PTCH1-210ENST00000468211 CLCNKBP51801 687 aa26.9■■□□□ 1.9
PTCH1-210ENST00000468211 FLCNQ8NFG4 579 aa26.9■■□□□ 1.9
PTCH1-210ENST00000468211 ST13P5Q8NFI4 369 aaPredicted RBP26.9■■□□□ 1.9
PTCH1-210ENST00000468211 PNMA5Q96PV4 448 aa26.9■■□□□ 1.9
PTCH1-210ENST00000468211 TARS2Q9BW92 718 aaKnown RBP26.9■■□□□ 1.9
PTCH1-210ENST00000468211 ARHGAP28Q9P2N2 729 aa26.9■■□□□ 1.9
PTCH1-210ENST00000468211 PI15O43692 258 aa26.89■■□□□ 1.9
PTCH1-210ENST00000468211 FGFR3P22607 806 aa26.89■■□□□ 1.9
PTCH1-210ENST00000468211 OSTNP61366 133 aa26.89■■□□□ 1.9
PTCH1-210ENST00000468211 ATP2C1P98194 919 aaPredicted RBP26.89■■□□□ 1.9
PTCH1-210ENST00000468211 SOX4Q06945 474 aaPredicted RBP26.89■■□□□ 1.9
PTCH1-210ENST00000468211 RSPO2Q6UXX9 243 aaPredicted RBP26.89■■□□□ 1.9
PTCH1-210ENST00000468211 C3orf58Q8NDZ4 430 aa26.89■■□□□ 1.9
PTCH1-210ENST00000468211 TMEM134Q9H6X4 195 aa26.89■■□□□ 1.9
PTCH1-210ENST00000468211 KMT5AQ9NQR1 393 aa26.89■■□□□ 1.9
PTCH1-210ENST00000468211 MYO15AQ9UKN7 3530 aa26.89■■□□□ 1.9
PTCH1-210ENST00000468211 SMIM28A0A1B0GU29 152 aa26.88■■□□□ 1.89
PTCH1-210ENST00000468211 TMEM189-UBE2V1I3L0A0 370 aa26.88■■□□□ 1.89
PTCH1-210ENST00000468211 I3L4J1 428 aa26.88■■□□□ 1.89
PTCH1-210ENST00000468211 ABLIM1O14639 778 aa26.88■■□□□ 1.89
PTCH1-210ENST00000468211 B3GAT3O94766 335 aa26.88■■□□□ 1.89
PTCH1-210ENST00000468211 GRM5P41594 1212 aa26.88■■□□□ 1.89
PTCH1-210ENST00000468211 CLCN5P51795 746 aa26.88■■□□□ 1.89
PTCH1-210ENST00000468211 NUBP1P53384 320 aa26.88■■□□□ 1.89
PTCH1-210ENST00000468211 ELAVL2Q12926 359 aaKnown RBP26.88■■□□□ 1.89
PTCH1-210ENST00000468211 DMP1Q13316 513 aaPredicted RBP26.88■■□□□ 1.89
PTCH1-210ENST00000468211 ZRSR1Q15695 479 aaKnown RBP26.88■■□□□ 1.89
PTCH1-210ENST00000468211 UPP1Q16831 310 aa26.88■■□□□ 1.89
PTCH1-210ENST00000468211 ZNF568Q3ZCX4 644 aa26.88■■□□□ 1.89
PTCH1-210ENST00000468211 ALKAL1Q6UXT8 129 aa26.88■■□□□ 1.89
PTCH1-210ENST00000468211 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.88■■□□□ 1.89
PTCH1-210ENST00000468211 GET4Q7L5D6 327 aaPredicted RBP26.88■■□□□ 1.89
PTCH1-210ENST00000468211 SLC44A3Q8N4M1 653 aa26.88■■□□□ 1.89
PTCH1-210ENST00000468211 ATOH1Q92858 354 aaPredicted RBP26.88■■□□□ 1.89
PTCH1-210ENST00000468211 ZFHX2Q9C0A1 2572 aaPredicted RBP26.88■■□□□ 1.89
PTCH1-210ENST00000468211 MYH15Q9Y2K3 1946 aa26.87■■□□□ 1.89
PTCH1-210ENST00000468211 SLC16A4O15374 487 aa26.87■■□□□ 1.89
PTCH1-210ENST00000468211 MEFVO15553 781 aaPredicted RBP26.87■■□□□ 1.89
PTCH1-210ENST00000468211 CENPBP07199 599 aaPredicted RBP26.87■■□□□ 1.89
PTCH1-210ENST00000468211 LAMP2P13473 410 aa26.87■■□□□ 1.89
PTCH1-210ENST00000468211 GJB2P29033 226 aa26.87■■□□□ 1.89
PTCH1-210ENST00000468211 BRCC3P46736 316 aa26.87■■□□□ 1.89
PTCH1-210ENST00000468211 NTHL1P78549 312 aa26.87■■□□□ 1.89
PTCH1-210ENST00000468211 RAD51AP2Q09MP3 1159 aa26.87■■□□□ 1.89
PTCH1-210ENST00000468211 RILPL1Q5EBL4 403 aa26.87■■□□□ 1.89
PTCH1-210ENST00000468211 XKR4Q5GH76 650 aa26.87■■□□□ 1.89
PTCH1-210ENST00000468211 DCLRE1AQ6PJP8 1040 aa26.87■■□□□ 1.89
PTCH1-210ENST00000468211 GRASPQ7Z6J2 395 aaPredicted RBP26.87■■□□□ 1.89
PTCH1-210ENST00000468211 SIX5Q8N196 739 aa26.87■■□□□ 1.89
PTCH1-210ENST00000468211 DRC1Q96MC2 740 aa26.87■■□□□ 1.89
PTCH1-210ENST00000468211 ZMAT2Q96NC0 199 aaKnown RBP26.87■■□□□ 1.89
PTCH1-210ENST00000468211 PLIN2Q99541 437 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms