RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 SCYL3Q8IZE3 742 aa5.16□□□□□ -1.58
SSR3-204ENST00000467733 IGDCC4Q8TDY8 1250 aa5.16□□□□□ -1.58
SSR3-204ENST00000467733 ATXN2LQ8WWM7 1075 aaKnown RBP5.16□□□□□ -1.58
SSR3-204ENST00000467733 SOCS4Q8WXH5 440 aa5.16□□□□□ -1.58
SSR3-204ENST00000467733 MBD6Q96DN6 1003 aa5.16□□□□□ -1.58
SSR3-204ENST00000467733 UHRF1Q96T88 793 aaPredicted RBP5.16□□□□□ -1.58
SSR3-204ENST00000467733 C1QTNF1Q9BXJ1 281 aa5.16□□□□□ -1.58
SSR3-204ENST00000467733 TRIM55Q9BYV6 548 aa5.16□□□□□ -1.58
SSR3-204ENST00000467733 IFT57Q9NWB7 429 aa5.16□□□□□ -1.58
SSR3-204ENST00000467733 THEGQ9P2T0 379 aa5.16□□□□□ -1.58
SSR3-204ENST00000467733 AKT3Q9Y243 479 aa5.16□□□□□ -1.58
SSR3-204ENST00000467733 TESMINQ9Y4I5 508 aa5.16□□□□□ -1.58
SSR3-204ENST00000467733 AFG3L2Q9Y4W6 797 aa5.16□□□□□ -1.58
SSR3-204ENST00000467733 ZHX2Q9Y6X8 837 aa5.16□□□□□ -1.58
SSR3-204ENST00000467733 ZNF236Q9UL36 1845 aa5.16□□□□□ -1.58
SSR3-204ENST00000467733 RFX7Q2KHR2 1363 aa5.16□□□□□ -1.58
SSR3-204ENST00000467733 TRIM75PA6NK02 468 aa5.15□□□□□ -1.59
SSR3-204ENST00000467733 ELL2O00472 640 aaPredicted RBP5.15□□□□□ -1.59
SSR3-204ENST00000467733 PLIN1O60240 522 aa5.15□□□□□ -1.59
SSR3-204ENST00000467733 ZKSCAN1P17029 563 aaPredicted RBP5.15□□□□□ -1.59
SSR3-204ENST00000467733 STAT5AP42229 794 aa5.15□□□□□ -1.59
SSR3-204ENST00000467733 GNAI1P63096 354 aa5.15□□□□□ -1.59
SSR3-204ENST00000467733 SCRN1Q12765 414 aa5.15□□□□□ -1.59
SSR3-204ENST00000467733 TCP10Q12799 353 aa5.15□□□□□ -1.59
SSR3-204ENST00000467733 TAF7LQ5H9L4 462 aa5.15□□□□□ -1.59
SSR3-204ENST00000467733 TREML2Q5T2D2 321 aa5.15□□□□□ -1.59
SSR3-204ENST00000467733 IQCEQ6IPM2 695 aa5.15□□□□□ -1.59
SSR3-204ENST00000467733 LDHAL6AQ6ZMR3 332 aa5.15□□□□□ -1.59
SSR3-204ENST00000467733 EEPD1Q7L9B9 569 aa5.15□□□□□ -1.59
SSR3-204ENST00000467733 KBTBD2Q8IY47 623 aa5.15□□□□□ -1.59
SSR3-204ENST00000467733 Q8N1Y9 231 aa5.15□□□□□ -1.59
SSR3-204ENST00000467733 KLHL36Q8N4N3 616 aa5.15□□□□□ -1.59
SSR3-204ENST00000467733 C8orf58Q8NAV2 365 aa5.15□□□□□ -1.59
SSR3-204ENST00000467733 RUNDC1Q96C34 613 aa5.15□□□□□ -1.59
SSR3-204ENST00000467733 ASB2Q96Q27 587 aa5.15□□□□□ -1.59
SSR3-204ENST00000467733 TMEM209Q96SK2 561 aa5.15□□□□□ -1.59
SSR3-204ENST00000467733 PCGF6Q9BYE7 350 aa5.15□□□□□ -1.59
SSR3-204ENST00000467733 CNNM1Q9NRU3 951 aa5.15□□□□□ -1.59
SSR3-204ENST00000467733 LRP2BPQ9P2M1 347 aa5.15□□□□□ -1.59
SSR3-204ENST00000467733 MORF4L1Q9UBU8 362 aa5.15□□□□□ -1.59
SSR3-204ENST00000467733 FTSJ1Q9UET6 329 aa5.15□□□□□ -1.59
SSR3-204ENST00000467733 TRIOO75962 3097 aa5.15□□□□□ -1.59
SSR3-204ENST00000467733 SPTBN4Q9H254 2564 aa5.14□□□□□ -1.59
SSR3-204ENST00000467733 LRRC37A2A6NM11 1700 aa5.14□□□□□ -1.59
SSR3-204ENST00000467733 SIPA1L1O43166 1804 aa5.14□□□□□ -1.59
SSR3-204ENST00000467733 PRRC2BQ5JSZ5 2229 aaKnown RBP5.14□□□□□ -1.59
SSR3-204ENST00000467733 AGRPO00253 132 aa5.14□□□□□ -1.59
SSR3-204ENST00000467733 FRAT2O75474 233 aaPredicted RBP5.14□□□□□ -1.59
SSR3-204ENST00000467733 CCND3P30281 292 aaPredicted RBP5.14□□□□□ -1.59
SSR3-204ENST00000467733 RPL11P62913 178 aaKnown RBP5.14□□□□□ -1.59
SSR3-204ENST00000467733 MRPS5P82675 430 aaKnown RBP5.14□□□□□ -1.59
SSR3-204ENST00000467733 CALD1Q05682 793 aaKnown RBP5.14□□□□□ -1.59
SSR3-204ENST00000467733 PABPC4Q13310 644 aaKnown RBP eCLIP5.14□□□□□ -1.596e-9■■□□□ 11.6
SSR3-204ENST00000467733 SF3A1Q15459 793 aaKnown RBP5.14□□□□□ -1.59
SSR3-204ENST00000467733 CCDC57Q2TAC2 916 aa5.14□□□□□ -1.59
SSR3-204ENST00000467733 SV2CQ496J9 727 aa5.14□□□□□ -1.59
SSR3-204ENST00000467733 AKNAD1Q5T1N1 836 aa5.14□□□□□ -1.59
SSR3-204ENST00000467733 CDC42EP5Q6NZY7 148 aa5.14□□□□□ -1.59
SSR3-204ENST00000467733 BVESQ8NE79 360 aa5.14□□□□□ -1.59
SSR3-204ENST00000467733 LINS1Q8NG48 757 aa5.14□□□□□ -1.59
SSR3-204ENST00000467733 HNRNPLLQ8WVV9 542 aaKnown RBP5.14□□□□□ -1.59
SSR3-204ENST00000467733 SNX27Q96L92 541 aa5.14□□□□□ -1.59
SSR3-204ENST00000467733 RNPC3Q96LT9 517 aaKnown RBP5.14□□□□□ -1.59
SSR3-204ENST00000467733 STK31Q9BXU1 1019 aa5.14□□□□□ -1.59
SSR3-204ENST00000467733 SENP6Q9GZR1 1112 aaPredicted RBP5.14□□□□□ -1.59
SSR3-204ENST00000467733 EPN3Q9H201 632 aa5.14□□□□□ -1.59
SSR3-204ENST00000467733 BARX1Q9HBU1 254 aaPredicted RBP5.14□□□□□ -1.59
SSR3-204ENST00000467733 DTLQ9NZJ0 730 aa5.14□□□□□ -1.59
SSR3-204ENST00000467733 EMC9Q9Y3B6 208 aa5.14□□□□□ -1.59
SSR3-204ENST00000467733 HS3ST3A1Q9Y663 406 aa5.14□□□□□ -1.59
SSR3-204ENST00000467733 CDK5RAP2Q96SN8 1893 aa5.13□□□□□ -1.59
SSR3-204ENST00000467733 ZNF318Q5VUA4 2279 aa5.13□□□□□ -1.59
SSR3-204ENST00000467733 SMCHD1A6NHR9 2005 aa5.13□□□□□ -1.59
SSR3-204ENST00000467733 DNM1LO00429 736 aa5.13□□□□□ -1.59
SSR3-204ENST00000467733 MSCO60682 206 aa5.13□□□□□ -1.59
SSR3-204ENST00000467733 CTNND1O60716 968 aaKnown RBP5.13□□□□□ -1.59
SSR3-204ENST00000467733 KCNH1O95259 989 aa5.13□□□□□ -1.59
SSR3-204ENST00000467733 CYP2B6P20813 491 aa5.13□□□□□ -1.59
SSR3-204ENST00000467733 KLF10Q13118 480 aa5.13□□□□□ -1.59
SSR3-204ENST00000467733 HS1BP3Q53T59 392 aa5.13□□□□□ -1.59
SSR3-204ENST00000467733 CAVIN4Q5BKX8 364 aa5.13□□□□□ -1.59
SSR3-204ENST00000467733 EPHA10Q5JZY3 1008 aa5.13□□□□□ -1.59
SSR3-204ENST00000467733 SPDYAQ5MJ70 313 aa5.13□□□□□ -1.59
SSR3-204ENST00000467733 E4F1Q66K89 784 aaPredicted RBP5.13□□□□□ -1.59
SSR3-204ENST00000467733 LMBR1LQ6UX01 489 aa5.13□□□□□ -1.59
SSR3-204ENST00000467733 G2E3Q7L622 706 aa5.13□□□□□ -1.59
SSR3-204ENST00000467733 TSPYL6Q8N831 410 aa5.13□□□□□ -1.59
SSR3-204ENST00000467733 DNAAF4Q8WXU2 420 aa5.13□□□□□ -1.59
SSR3-204ENST00000467733 USP6NLQ92738 828 aa5.13□□□□□ -1.59
SSR3-204ENST00000467733 BADQ92934 168 aa5.13□□□□□ -1.59
SSR3-204ENST00000467733 TOE1Q96GM8 510 aaKnown RBP5.13□□□□□ -1.59
SSR3-204ENST00000467733 GPRC5CQ9NQ84 441 aa5.13□□□□□ -1.59
SSR3-204ENST00000467733 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.13□□□□□ -1.59
SSR3-204ENST00000467733 ATP11BQ9Y2G3 1177 aa5.13□□□□□ -1.59
SSR3-204ENST00000467733 COA3Q9Y2R0 106 aaPredicted RBP5.13□□□□□ -1.59
SSR3-204ENST00000467733 TIMM13Q9Y5L4 95 aaPredicted RBP5.13□□□□□ -1.59
SSR3-204ENST00000467733 LRRFIP2Q9Y608 721 aaKnown RBP5.13□□□□□ -1.59
SSR3-204ENST00000467733 X6R8D5 127 aa5.13□□□□□ -1.59
SSR3-204ENST00000467733 MROH5Q6ZUA9 1318 aa5.13□□□□□ -1.59
SSR3-204ENST00000467733 KIF16BQ96L93 1317 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms