RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 FRMD5Q7Z6J6 570 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 TRIM59Q8IWR1 403 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 OTUD6BQ8N6M0 293 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 TUBGCP2Q9BSJ2 902 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 KIAA1586Q9HCI6 787 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 FAM105AQ9NUU6 356 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 SNTG2Q9NY99 539 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 RBAKQ9NYW8 714 aaPredicted RBP7.45□□□□□ -1.22
SCAF4-204ENST00000467731 PRKAG2Q9UGJ0 569 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 IPPQ9Y573 584 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 AP5Z1O43299 807 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 EVI5O60447 810 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 CXCL8P10145 99 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 DLG4P78352 724 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 FANCCQ00597 558 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 CYP24A1Q07973 514 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 ENOX2Q16206 610 aaKnown RBP7.45□□□□□ -1.22
SCAF4-204ENST00000467731 TCTN1Q2MV58 587 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 UVSSAQ2YD98 709 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 TCERG1LQ5VWI1 586 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 APBB1IPQ7Z5R6 666 aaPredicted RBP7.45□□□□□ -1.22
SCAF4-204ENST00000467731 RTN4RL1Q86UN2 441 aaPredicted RBP7.45□□□□□ -1.22
SCAF4-204ENST00000467731 SMG8Q8ND04 991 aaKnown RBP7.45□□□□□ -1.22
SCAF4-204ENST00000467731 PLEKHO2Q8TD55 490 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 LINC01599Q8WXQ3 324 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 VWCEQ96DN2 955 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 MFSD14AQ96MC6 490 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 APOL6Q9BWW8 343 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 FTHL17Q9BXU8 183 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 METTL14Q9HCE5 456 aaKnown RBP7.45□□□□□ -1.22
SCAF4-204ENST00000467731 TAB2Q9NYJ8 693 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 PCDHB2Q9Y5E7 798 aa7.45□□□□□ -1.22
SCAF4-204ENST00000467731 TDRD15B5MCY1 1934 aaKnown RBP7.45□□□□□ -1.22
SCAF4-204ENST00000467731 LRRC10BA6NIK2 292 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 MEIS3P2A8K0S8 358 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 SERPINC1P01008 464 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 CLTAP09496 248 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 TRIM49P0CI25 452 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 TRIM49CP0CI26 452 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 DLATP10515 647 aaKnown RBP7.44□□□□□ -1.22
SCAF4-204ENST00000467731 IBSPP21815 317 aaPredicted RBP7.44□□□□□ -1.22
SCAF4-204ENST00000467731 AKAP5P24588 427 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 GRM5P41594 1212 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 BRSK2Q8IWQ3 736 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 ANKRD20A12PQ8NF67 263 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 SEPT8Q92599 483 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 APBB2Q92870 758 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 SLC35C1Q96A29 364 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 CCDC127Q96BQ5 260 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 FAM212AQ96EL1 285 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 ACAP3Q96P50 834 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 TRAIPQ9BWF2 469 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 VPS16Q9H269 839 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 TSPYL2Q9H2G4 693 aaPredicted RBP7.44□□□□□ -1.22
SCAF4-204ENST00000467731 RNF39Q9H2S5 420 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 RPF1Q9H9Y2 349 aaKnown RBP7.44□□□□□ -1.22
SCAF4-204ENST00000467731 PDE11AQ9HCR9 933 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 RGS18Q9NS28 235 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 LIMA1Q9UHB6 759 aaKnown RBP7.44□□□□□ -1.22
SCAF4-204ENST00000467731 PDE4DIPQ5VU43 2346 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 A0A0U1RQF3 1178 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 LRRIQ3A6PVS8 624 aaPredicted RBP7.44□□□□□ -1.22
SCAF4-204ENST00000467731 PES1O00541 588 aaKnown RBP7.44□□□□□ -1.22
SCAF4-204ENST00000467731 MEFVO15553 781 aaPredicted RBP7.44□□□□□ -1.22
SCAF4-204ENST00000467731 RECQL4O94761 1208 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 KRT13P13646 458 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 SYN1P17600 705 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 RFC2P35250 354 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 VAMP7P51809 220 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 COPB1P53618 953 aaKnown RBP7.44□□□□□ -1.22
SCAF4-204ENST00000467731 MIIPQ5JXC2 388 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 LMBRD2Q68DH5 695 aaPredicted RBP7.44□□□□□ -1.22
SCAF4-204ENST00000467731 SLC24A5Q71RS6 500 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 TMEM199Q8N511 208 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 PARD3BQ8TEW8 1205 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 POP1Q99575 1024 aaKnown RBP7.44□□□□□ -1.22
SCAF4-204ENST00000467731 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.44□□□□□ -1.22
SCAF4-204ENST00000467731 ATF7P17544 494 aaPredicted RBP7.44□□□□□ -1.22
SCAF4-204ENST00000467731 RAB27AP51159 221 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 UBASH3AP57075 661 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 KCNH2Q12809 1159 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 MAN2A1Q16706 1144 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 KYAT1Q16773 422 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 SLC10A6Q3KNW5 377 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 DPF3Q92784 378 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 BADQ92934 168 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 LPPQ93052 612 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 FAM84AQ96KN4 292 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 FNBP1Q96RU3 617 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 TRIM5Q9C035 493 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 CXCL16Q9H2A7 254 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 MMRN2Q9H8L6 949 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 IFNKQ9P0W0 207 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 CALCOCO1Q9P1Z2 691 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 PARP2Q9UGN5 583 aa7.44□□□□□ -1.22
SCAF4-204ENST00000467731 A0A1B0GTH6 734 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 TTC26A0AVF1 554 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 C9IYK1 514 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 ZNF623O75123 536 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 ACRP10323 421 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms