RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	NT5C1B-RDH14	C9J2C7	533 aa		13.19	□□□□□ -0.3
CTNS-205	ENST00000467663	PI4K2B	G5E9Z4	385 aa		13.19	□□□□□ -0.3
CTNS-205	ENST00000467663	EIF3D	O15371	548 aa	Known RBP eCLIP	13.19	□□□□□ -0.3
CTNS-205	ENST00000467663	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.19	□□□□□ -0.3
CTNS-205	ENST00000467663	FGFR1OP	O95684	399 aa	Known RBP	13.19	□□□□□ -0.3
CTNS-205	ENST00000467663	GALT	P07902	379 aa		13.19	□□□□□ -0.3
CTNS-205	ENST00000467663	PRKCSH	P14314	528 aa	Predicted RBP	13.19	□□□□□ -0.3
CTNS-205	ENST00000467663	CASP1	P29466	404 aa		13.19	□□□□□ -0.3
CTNS-205	ENST00000467663	ZP2	Q05996	745 aa		13.19	□□□□□ -0.3
CTNS-205	ENST00000467663	PAK1	Q13153	545 aa		13.19	□□□□□ -0.3
CTNS-205	ENST00000467663	CLUL1	Q15846	466 aa		13.19	□□□□□ -0.3
CTNS-205	ENST00000467663	SPATA1	Q5VX52	437 aa		13.19	□□□□□ -0.3
CTNS-205	ENST00000467663	PLPP4	Q5VZY2	271 aa		13.19	□□□□□ -0.3
CTNS-205	ENST00000467663	PPP4R3CP	Q6ZMV5	832 aa		13.19	□□□□□ -0.3
CTNS-205	ENST00000467663	TMC7	Q7Z402	723 aa		13.19	□□□□□ -0.3
CTNS-205	ENST00000467663	ADHFE1	Q8IWW8	467 aa		13.19	□□□□□ -0.3
CTNS-205	ENST00000467663	MRPL43	Q8N983	215 aa	Known RBP	13.19	□□□□□ -0.3
CTNS-205	ENST00000467663	SMRP1	Q8NCR6	262 aa		13.19	□□□□□ -0.3
CTNS-205	ENST00000467663	KCNN1	Q92952	543 aa		13.19	□□□□□ -0.3
CTNS-205	ENST00000467663	RSAD1	Q9HA92	442 aa		13.19	□□□□□ -0.3
CTNS-205	ENST00000467663	UBN1	Q9NPG3	1134 aa		13.19	□□□□□ -0.3
CTNS-205	ENST00000467663	GPRC5C	Q9NQ84	441 aa		13.19	□□□□□ -0.3
CTNS-205	ENST00000467663	ENTPD7	Q9NQZ7	604 aa		13.19	□□□□□ -0.3
CTNS-205	ENST00000467663	KANSL3	Q9P2N6	904 aa		13.19	□□□□□ -0.3
CTNS-205	ENST00000467663	BARX2	Q9UMQ3	279 aa	Predicted RBP	13.19	□□□□□ -0.3
CTNS-205	ENST00000467663	INPP5F	Q9Y2H2	1132 aa		13.19	□□□□□ -0.3
CTNS-205	ENST00000467663	IPP	Q9Y573	584 aa		13.19	□□□□□ -0.3
CTNS-205	ENST00000467663	PHLPP2	Q6ZVD8	1323 aa		13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	HIDE1	A8MVS5	230 aa		13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	INPPL1	O15357	1258 aa		13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	B4GALT3	O60512	393 aa		13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	ITGA4	P13612	1032 aa		13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	ARF4	P18085	180 aa	Predicted RBP	13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	CCNE1	P24864	410 aa		13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	SSTR3	P32745	418 aa	Predicted RBP	13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	PRCP	P42785	496 aa		13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	AFF1	P51825	1210 aa	Known RBP	13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	RNASEL	Q05823	741 aa	Known RBP	13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	LRRC63	Q05C16	580 aa		13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	SPAG1	Q07617	926 aa		13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	SMC1A	Q14683	1233 aa	Known RBP	13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	PPP2R5A	Q15172	486 aa		13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	ISM2	Q6H9L7	571 aa		13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	MAEA	Q7L5Y9	396 aa		13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	DDX53	Q86TM3	631 aa	Known RBP	13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	TMEM173	Q86WV6	379 aa	Predicted RBP	13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	ZNF280B	Q86YH2	543 aa		13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	DHX40	Q8IX18	779 aa	Known RBP	13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	RNF214	Q8ND24	703 aa		13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	URGCP	Q8TCY9	931 aa		13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	HVCN1	Q96D96	273 aa		13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	TMEM169	Q96HH4	297 aa		13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	IGSF21	Q96ID5	467 aa		13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	CPB2	Q96IY4	423 aa		13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	TMEM175	Q9BSA9	504 aa		13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	RUSC1	Q9BVN2	902 aa		13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	EIF2A	Q9BY44	585 aa	Known RBP	13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	ST6GALNAC4	Q9H4F1	302 aa		13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	DNAJB4	Q9UDY4	337 aa		13.18	□□□□□ -0.3
CTNS-205	ENST00000467663	PCDHB13	Q9Y5F0	798 aa		13.18	□□□□□ -0.3
CTNS-205	ENST00000467663		A0A1B0GUA9	196 aa		13.17	□□□□□ -0.3
CTNS-205	ENST00000467663	C2orf71	A6NGG8	1288 aa		13.17	□□□□□ -0.3
CTNS-205	ENST00000467663	LRRIQ4	A6NIV6	560 aa		13.17	□□□□□ -0.3
CTNS-205	ENST00000467663	B4GALT5	O43286	388 aa		13.17	□□□□□ -0.3
CTNS-205	ENST00000467663	DDHD2	O94830	711 aa		13.17	□□□□□ -0.3
CTNS-205	ENST00000467663	SLC11A1	P49279	550 aa		13.17	□□□□□ -0.3
CTNS-205	ENST00000467663	SMTN	P53814	917 aa		13.17	□□□□□ -0.3
CTNS-205	ENST00000467663	SNRPF	P62306	86 aa	Known RBP	13.17	□□□□□ -0.3
CTNS-205	ENST00000467663	RBM10	P98175	930 aa	Known RBP	13.17	□□□□□ -0.3
CTNS-205	ENST00000467663	STK4	Q13043	487 aa		13.17	□□□□□ -0.3
CTNS-205	ENST00000467663	FAM187B	Q17R55	369 aa		13.17	□□□□□ -0.3
CTNS-205	ENST00000467663	BMT2	Q1RMZ1	405 aa		13.17	□□□□□ -0.3
CTNS-205	ENST00000467663	CENPP	Q6IPU0	288 aa		13.17	□□□□□ -0.3
CTNS-205	ENST00000467663	SARM1	Q6SZW1	724 aa		13.17	□□□□□ -0.3
CTNS-205	ENST00000467663	LUZP1	Q86V48	1076 aa		13.17	□□□□□ -0.3
CTNS-205	ENST00000467663	FAM114A1	Q8IWE2	563 aa		13.17	□□□□□ -0.3
CTNS-205	ENST00000467663	VPS52	Q8N1B4	723 aa		13.17	□□□□□ -0.3
CTNS-205	ENST00000467663	AOPEP	Q8N6M6	819 aa		13.17	□□□□□ -0.3
CTNS-205	ENST00000467663	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.17	□□□□□ -0.3
CTNS-205	ENST00000467663	PRIMPOL	Q96LW4	560 aa		13.17	□□□□□ -0.3
CTNS-205	ENST00000467663	POP1	Q99575	1024 aa	Known RBP	13.17	□□□□□ -0.3
CTNS-205	ENST00000467663	TSG101	Q99816	390 aa		13.17	□□□□□ -0.3
CTNS-205	ENST00000467663	NTPCR	Q9BSD7	190 aa	Known RBP	13.17	□□□□□ -0.3
CTNS-205	ENST00000467663	ZBP1	Q9H171	429 aa		13.17	□□□□□ -0.3
CTNS-205	ENST00000467663	RNF39	Q9H2S5	420 aa		13.17	□□□□□ -0.3
CTNS-205	ENST00000467663	FZD8	Q9H461	694 aa		13.17	□□□□□ -0.3
CTNS-205	ENST00000467663	CGN	Q9P2M7	1197 aa	Known RBP	13.17	□□□□□ -0.3
CTNS-205	ENST00000467663	IRAK3	Q9Y616	596 aa		13.17	□□□□□ -0.3
CTNS-205	ENST00000467663	HIP1R	O75146	1068 aa		13.16	□□□□□ -0.3
CTNS-205	ENST00000467663	CXCL14	O95715	111 aa		13.16	□□□□□ -0.3
CTNS-205	ENST00000467663	POMC	P01189	267 aa		13.16	□□□□□ -0.3
CTNS-205	ENST00000467663	ALDH2	P05091	517 aa		13.16	□□□□□ -0.3
CTNS-205	ENST00000467663	SRGAP2B	P0DMP2	458 aa		13.16	□□□□□ -0.3
CTNS-205	ENST00000467663	PLS3	P13797	630 aa		13.16	□□□□□ -0.3
CTNS-205	ENST00000467663	NAMPT	P43490	491 aa		13.16	□□□□□ -0.3
CTNS-205	ENST00000467663	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.16	□□□□□ -0.3
CTNS-205	ENST00000467663	BMS1	Q14692	1282 aa	Known RBP	13.16	□□□□□ -0.3
CTNS-205	ENST00000467663	NCAPH	Q15003	741 aa		13.16	□□□□□ -0.3
CTNS-205	ENST00000467663	TPD52L1	Q16890	204 aa	Predicted RBP	13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms