RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 STK4Q13043 487 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 PSMD2Q13200 908 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 GPM6BQ13491 265 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 PNOCQ13519 176 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 ENOX2Q16206 610 aaKnown RBP12.06□□□□□ -0.48
MSH5-212ENST00000467319 SLC10A6Q3KNW5 377 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 SEZ6Q53EL9 994 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 SLFN12LQ6IEE8 588 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 THNSL1Q8IYQ7 743 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 MRPL38Q96DV4 380 aaKnown RBP12.06□□□□□ -0.48
MSH5-212ENST00000467319 CCDC34Q96HJ3 373 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 ZMAT2Q96NC0 199 aaKnown RBP12.06□□□□□ -0.48
MSH5-212ENST00000467319 GAS2L1Q99501 681 aaPredicted RBP12.06□□□□□ -0.48
MSH5-212ENST00000467319 MSTO1Q9BUK6 570 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 VN1R3Q9BXE9 311 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 SLC39A2Q9NP94 309 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 MARCH5Q9NX47 278 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 LMCD1Q9NZU5 365 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 CPSF3Q9UKF6 684 aaKnown RBP12.06□□□□□ -0.48
MSH5-212ENST00000467319 LZTS1Q9Y250 596 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 PCDHB12Q9Y5F1 795 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 MTCH2Q9Y6C9 303 aa12.06□□□□□ -0.48
MSH5-212ENST00000467319 XIRP2A4UGR9 3374 aa12.05□□□□□ -0.48
MSH5-212ENST00000467319 TRIP11Q15643 1979 aa12.05□□□□□ -0.48
MSH5-212ENST00000467319 YARSP54577 528 aaKnown RBP12.05□□□□□ -0.48
MSH5-212ENST00000467319 OSTNP61366 133 aa12.05□□□□□ -0.48
MSH5-212ENST00000467319 POU5F1Q01860 360 aaKnown RBP12.05□□□□□ -0.48
MSH5-212ENST00000467319 TUSC3Q13454 348 aa12.05□□□□□ -0.48
MSH5-212ENST00000467319 GLRA4Q5JXX5 417 aa12.05□□□□□ -0.48
MSH5-212ENST00000467319 CRELD2Q6UXH1 353 aaPredicted RBP12.05□□□□□ -0.48
MSH5-212ENST00000467319 C12orf56Q8IXR9 622 aa12.05□□□□□ -0.48
MSH5-212ENST00000467319 RNF168Q8IYW5 571 aaPredicted RBP12.05□□□□□ -0.48
MSH5-212ENST00000467319 SPPL3Q8TCT6 385 aa12.05□□□□□ -0.48
MSH5-212ENST00000467319 TMEM174Q8WUU8 243 aa12.05□□□□□ -0.48
MSH5-212ENST00000467319 IGSF21Q96ID5 467 aa12.05□□□□□ -0.48
MSH5-212ENST00000467319 ACAP3Q96P50 834 aa12.05□□□□□ -0.48
MSH5-212ENST00000467319 GBP4Q96PP9 640 aa12.05□□□□□ -0.48
MSH5-212ENST00000467319 CBWD1Q9BRT8 395 aa12.05□□□□□ -0.48
MSH5-212ENST00000467319 GBP3Q9H0R5 595 aa12.05□□□□□ -0.48
MSH5-212ENST00000467319 PLEKHA5Q9HAU0 1116 aa12.05□□□□□ -0.48
MSH5-212ENST00000467319 AGPAT3Q9NRZ7 376 aa12.05□□□□□ -0.48
MSH5-212ENST00000467319 SPG21Q9NZD8 308 aa12.05□□□□□ -0.48
MSH5-212ENST00000467319 AGO2Q9UKV8 859 aaKnown RBP12.05□□□□□ -0.48
MSH5-212ENST00000467319 SMIM28A0A1B0GU29 152 aa12.04□□□□□ -0.48
MSH5-212ENST00000467319 FSCN2O14926 492 aa12.04□□□□□ -0.48
MSH5-212ENST00000467319 PRPF40AO75400 957 aaKnown RBP12.04□□□□□ -0.48
MSH5-212ENST00000467319 SLC34A2O95436 690 aa12.04□□□□□ -0.48
MSH5-212ENST00000467319 THP07101 528 aa12.04□□□□□ -0.48
MSH5-212ENST00000467319 ALDH7A1P49419 539 aaKnown RBP12.04□□□□□ -0.48
MSH5-212ENST00000467319 SNRPFP62306 86 aaKnown RBP12.04□□□□□ -0.48
MSH5-212ENST00000467319 SOX4Q06945 474 aaPredicted RBP12.04□□□□□ -0.48
MSH5-212ENST00000467319 TIGD5Q53EQ6 642 aa12.04□□□□□ -0.48
MSH5-212ENST00000467319 SPOUT1Q5T280 376 aaKnown RBP12.04□□□□□ -0.48
MSH5-212ENST00000467319 SYCP3Q8IZU3 236 aa12.04□□□□□ -0.48
MSH5-212ENST00000467319 ZSWIM2Q8NEG5 633 aa12.04□□□□□ -0.48
MSH5-212ENST00000467319 POMGNT1Q8WZA1 660 aa12.04□□□□□ -0.48
MSH5-212ENST00000467319 FBXL18Q96ME1 805 aa12.04□□□□□ -0.48
MSH5-212ENST00000467319 GSDMAQ96QA5 445 aa12.04□□□□□ -0.48
MSH5-212ENST00000467319 PAAF1Q9BRP4 392 aa12.04□□□□□ -0.48
MSH5-212ENST00000467319 KCTD10Q9H3F6 313 aa12.04□□□□□ -0.48
MSH5-212ENST00000467319 ALG13Q9NP73 1137 aaKnown RBP12.04□□□□□ -0.48
MSH5-212ENST00000467319 LMBRD1Q9NUN5 540 aa12.04□□□□□ -0.48
MSH5-212ENST00000467319 F8W810 466 aa12.03□□□□□ -0.48
MSH5-212ENST00000467319 TMEM189-UBE2V1I3L0A0 370 aa12.03□□□□□ -0.48
MSH5-212ENST00000467319 NRP1O14786 923 aa12.03□□□□□ -0.48
MSH5-212ENST00000467319 KIAA0391O15091 583 aaKnown RBP12.03□□□□□ -0.48
MSH5-212ENST00000467319 EXTL3O43909 919 aa12.03□□□□□ -0.48
MSH5-212ENST00000467319 MATR3P43243 847 aaKnown RBP eCLIP12.03□□□□□ -0.48
MSH5-212ENST00000467319 ACOT2P49753 483 aa12.03□□□□□ -0.48
MSH5-212ENST00000467319 WNT7BP56706 349 aa12.03□□□□□ -0.48
MSH5-212ENST00000467319 PPP2R3AQ06190 1150 aa12.03□□□□□ -0.48
MSH5-212ENST00000467319 COL19A1Q14993 1142 aa12.03□□□□□ -0.48
MSH5-212ENST00000467319 ZBTB6Q15916 424 aa12.03□□□□□ -0.48
MSH5-212ENST00000467319 PTPROQ16827 1216 aa12.03□□□□□ -0.48
MSH5-212ENST00000467319 KNOP1Q1ED39 458 aaKnown RBP12.03□□□□□ -0.48
MSH5-212ENST00000467319 ZCWPW2Q504Y3 356 aa12.03□□□□□ -0.48
MSH5-212ENST00000467319 COBLL1Q53SF7 1204 aa12.03□□□□□ -0.48
MSH5-212ENST00000467319 ARMCX5Q6P1M9 558 aa12.03□□□□□ -0.48
MSH5-212ENST00000467319 HS2ST1Q7LGA3 356 aa12.03□□□□□ -0.48
MSH5-212ENST00000467319 BRSK2Q8IWQ3 736 aa12.03□□□□□ -0.48
MSH5-212ENST00000467319 NELFCDQ8IXH7 590 aa12.03□□□□□ -0.48
MSH5-212ENST00000467319 GUF1Q8N442 669 aaKnown RBP12.03□□□□□ -0.48
MSH5-212ENST00000467319 POF1BQ8WVV4 589 aa12.03□□□□□ -0.48
MSH5-212ENST00000467319 CCDC47Q96A33 483 aaKnown RBP12.03□□□□□ -0.48
MSH5-212ENST00000467319 TMEM169Q96HH4 297 aa12.03□□□□□ -0.48
MSH5-212ENST00000467319 TSPAN18Q96SJ8 248 aa12.03□□□□□ -0.48
MSH5-212ENST00000467319 SLC38A7Q9NVC3 462 aa12.03□□□□□ -0.48
MSH5-212ENST00000467319 RMND1Q9NWS8 449 aa12.03□□□□□ -0.48
MSH5-212ENST00000467319 CGNQ9P2M7 1197 aaKnown RBP12.03□□□□□ -0.48
MSH5-212ENST00000467319 CACNG4Q9UBN1 327 aa12.03□□□□□ -0.48
MSH5-212ENST00000467319 TUBGCP4Q9UGJ1 667 aa12.03□□□□□ -0.48
MSH5-212ENST00000467319 HOOK1Q9UJC3 728 aaKnown RBP12.03□□□□□ -0.48
MSH5-212ENST00000467319 PCDHA5Q9Y5H7 936 aa12.03□□□□□ -0.48
MSH5-212ENST00000467319 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.03□□□□□ -0.48
MSH5-212ENST00000467319 UNC80Q8N2C7 3258 aa12.03□□□□□ -0.48
MSH5-212ENST00000467319 BRWD1Q9NSI6 2320 aa12.03□□□□□ -0.48
MSH5-212ENST00000467319 MYO7AQ13402 2215 aa12.02□□□□□ -0.48
MSH5-212ENST00000467319 CASTOR2A6NHX0 329 aa12.02□□□□□ -0.49
MSH5-212ENST00000467319 LACTBL1A8MY62 500 aa12.02□□□□□ -0.49
MSH5-212ENST00000467319 NT5C1B-RDH14C9J2C7 533 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms