RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 NLRP11P59045 1033 aaKnown RBP10.31□□□□□ -0.76
APOBEC1-202ENST00000467171 CDC42EP1Q00587 391 aa10.31□□□□□ -0.76
APOBEC1-202ENST00000467171 MBTD1Q05BQ5 628 aa10.31□□□□□ -0.76
APOBEC1-202ENST00000467171 SURF1Q15526 300 aa10.31□□□□□ -0.76
APOBEC1-202ENST00000467171 NAB2Q15742 525 aa10.31□□□□□ -0.76
APOBEC1-202ENST00000467171 ZACNQ401N2 412 aa10.31□□□□□ -0.76
APOBEC1-202ENST00000467171 PAPD7Q5XG87 772 aaKnown RBP10.31□□□□□ -0.76
APOBEC1-202ENST00000467171 BRSK2Q8IWQ3 736 aa10.31□□□□□ -0.76
APOBEC1-202ENST00000467171 LRRC71Q8N4P6 559 aa10.31□□□□□ -0.76
APOBEC1-202ENST00000467171 TRIM58Q8NG06 486 aa10.31□□□□□ -0.76
APOBEC1-202ENST00000467171 SLC30A5Q8TAD4 765 aa10.31□□□□□ -0.76
APOBEC1-202ENST00000467171 KCNV2Q8TDN2 545 aa10.31□□□□□ -0.76
APOBEC1-202ENST00000467171 CCDC127Q96BQ5 260 aa10.31□□□□□ -0.76
APOBEC1-202ENST00000467171 FNBP1Q96RU3 617 aa10.31□□□□□ -0.76
APOBEC1-202ENST00000467171 PTPRHQ9HD43 1115 aa10.31□□□□□ -0.76
APOBEC1-202ENST00000467171 UBE2TQ9NPD8 197 aaPredicted RBP10.31□□□□□ -0.76
APOBEC1-202ENST00000467171 PRMT7Q9NVM4 692 aaPredicted RBP10.31□□□□□ -0.76
APOBEC1-202ENST00000467171 RAB20Q9NX57 234 aa10.31□□□□□ -0.76
APOBEC1-202ENST00000467171 TRIM10Q9UDY6 481 aa10.31□□□□□ -0.76
APOBEC1-202ENST00000467171 ADAMTS1Q9UHI8 967 aa10.31□□□□□ -0.76
APOBEC1-202ENST00000467171 CDC23Q9UJX2 597 aa10.31□□□□□ -0.76
APOBEC1-202ENST00000467171 GUCA1BQ9UMX6 200 aa10.31□□□□□ -0.76
APOBEC1-202ENST00000467171 TNFSF13BQ9Y275 285 aa10.31□□□□□ -0.76
APOBEC1-202ENST00000467171 CNTNAP2Q9UHC6 1331 aa10.31□□□□□ -0.76
APOBEC1-202ENST00000467171 OGTO15294 1046 aa10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 FAM189A1O60320 539 aa10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 TACC1O75410 805 aa10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 F2P00734 622 aa10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 C4BPAP04003 597 aaKnown RBP10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 SRGAP2CP0DJJ0 459 aa10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 MFAP3P55082 362 aa10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 TUBB4BP68371 445 aa10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 AMPD2Q01433 879 aa10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 GCNT1Q02742 428 aa10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 MAP2K1Q02750 393 aaPredicted RBP10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 PPFIA1Q13136 1202 aa10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 CRHR2Q13324 411 aa10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 PRPF4BQ13523 1007 aaKnown RBP10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 WHAMMP3Q1A5X7 153 aa10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 ALKBH5Q6P6C2 394 aaKnown RBP10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 MTHFD1LQ6UB35 978 aa10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 MPZL3Q6UWV2 235 aa10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 ZNF410Q86VK4 478 aa10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 RHPN2Q8IUC4 686 aa10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 FAM71AQ8IYT1 594 aa10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 OLIG1Q8TAK6 271 aa10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 HELQQ8TDG4 1101 aa10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 TAS1R2Q8TE23 839 aa10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 TRAPPC12Q8WVT3 735 aa10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 SHC3Q92529 594 aa10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 SEMA4DQ92854 862 aa10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 ZBTB45Q96K62 511 aaPredicted RBP10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 NT5C1BQ96P26 610 aa10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 NOX5Q96PH1 765 aa10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 CGRRF1Q99675 332 aa10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 RBAKQ9NYW8 714 aaPredicted RBP10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 FLRT1Q9NZU1 646 aa10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 NAGPAQ9UK23 515 aa10.3□□□□□ -0.76
APOBEC1-202ENST00000467171 A0A0A6YYK5 440 aaPredicted RBP10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 FOXN3O00409 490 aaPredicted RBP10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 DDX3XO00571 662 aaKnown RBP eCLIP10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 TNPO2O14787 897 aaKnown RBP10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 DYNC1LI2O43237 492 aaPredicted RBP10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 ADCY6O43306 1168 aa10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 ZNF286BP0CG31 522 aa10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 DLATP10515 647 aaKnown RBP10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 PRLRP16471 622 aa10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 MLLT3P42568 568 aaPredicted RBP10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 ACOT2P49753 483 aa10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 CLCN3P51790 818 aa10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 ARID5AQ03989 594 aa10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 GRIK4Q16099 956 aa10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 KYAT1Q16773 422 aa10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 MARCH8Q5T0T0 291 aa10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 SWT1Q5T5J6 900 aaKnown RBP10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 ATF7IP2Q5U623 682 aa10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 TRAPPC11Q7Z392 1133 aa10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 SRGAP1Q7Z6B7 1085 aa10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 TLK2Q86UE8 772 aa10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 WDR49Q8IV35 697 aa10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 ARHGEF19Q8IW93 802 aa10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 METTL13Q8N6R0 699 aa10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 CEP112Q8N8E3 955 aa10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 ZNF516Q92618 1163 aa10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 DHX38Q92620 1227 aaKnown RBP10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 NLRP4Q96MN2 994 aa10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 KREMEN1Q96MU8 473 aa10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 ALS2CR12Q96Q35 445 aa10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 MAP7D2Q96T17 732 aa10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 POP1Q99575 1024 aaKnown RBP10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 IFT122Q9HBG6 1241 aa10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 GPBP1L1Q9HC44 474 aaPredicted RBP10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 TOPORSQ9NS56 1045 aaPredicted RBP10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 ANKFY1Q9P2R3 1169 aa10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 CPSF3Q9UKF6 684 aaKnown RBP10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 JRKLQ9Y4A0 524 aa10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 DUSP10Q9Y6W6 482 aa10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 NRCAMQ92823 1304 aa10.29□□□□□ -0.76
APOBEC1-202ENST00000467171 SMIM35A0A1B0GVV1 85 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms