RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 SRGAP1Q7Z6B7 1085 aa7.24□□□□□ -1.25
UBXN4-205ENST00000467065 USP37Q86T82 979 aa7.24□□□□□ -1.25
UBXN4-205ENST00000467065 TMEM173Q86WV6 379 aaPredicted RBP7.24□□□□□ -1.25
UBXN4-205ENST00000467065 GJD3Q8N144 294 aa7.24□□□□□ -1.25
UBXN4-205ENST00000467065 SLC39A11Q8N1S5 342 aa7.24□□□□□ -1.25
UBXN4-205ENST00000467065 EFHBQ8N7U6 833 aa7.24□□□□□ -1.25
UBXN4-205ENST00000467065 ANKRD20A12PQ8NF67 263 aa7.24□□□□□ -1.25
UBXN4-205ENST00000467065 VN1R2Q8NFZ6 395 aa7.24□□□□□ -1.25
UBXN4-205ENST00000467065 GOLGA5Q8TBA6 731 aa7.24□□□□□ -1.25
UBXN4-205ENST00000467065 ASAP3Q8TDY4 903 aa7.24□□□□□ -1.25
UBXN4-205ENST00000467065 CPB2Q96IY4 423 aa7.24□□□□□ -1.25
UBXN4-205ENST00000467065 MSLNLQ96KJ4 702 aa7.24□□□□□ -1.25
UBXN4-205ENST00000467065 C7orf25Q9BPX7 421 aa7.24□□□□□ -1.25
UBXN4-205ENST00000467065 TCF25Q9BQ70 676 aa7.24□□□□□ -1.25
UBXN4-205ENST00000467065 ADPGKQ9BRR6 497 aa7.24□□□□□ -1.25
UBXN4-205ENST00000467065 MRPL9Q9BYD2 267 aaKnown RBP7.24□□□□□ -1.25
UBXN4-205ENST00000467065 TRIM6Q9C030 488 aaPredicted RBP7.24□□□□□ -1.25
UBXN4-205ENST00000467065 GBP3Q9H0R5 595 aa7.24□□□□□ -1.25
UBXN4-205ENST00000467065 POLR3FQ9H1D9 316 aaPredicted RBP7.24□□□□□ -1.25
UBXN4-205ENST00000467065 GPRC5CQ9NQ84 441 aa7.24□□□□□ -1.25
UBXN4-205ENST00000467065 TBC1D13Q9NVG8 400 aa7.24□□□□□ -1.25
UBXN4-205ENST00000467065 SPG21Q9NZD8 308 aa7.24□□□□□ -1.25
UBXN4-205ENST00000467065 CLEC1BQ9P126 229 aa7.24□□□□□ -1.25
UBXN4-205ENST00000467065 DNAJB4Q9UDY4 337 aa7.24□□□□□ -1.25
UBXN4-205ENST00000467065 RAPGEFL1Q9UHV5 662 aa7.24□□□□□ -1.25
UBXN4-205ENST00000467065 CD207Q9UJ71 328 aa7.24□□□□□ -1.25
UBXN4-205ENST00000467065 FAM50BQ9Y247 325 aa7.24□□□□□ -1.25
UBXN4-205ENST00000467065 PCDHB2Q9Y5E7 798 aa7.24□□□□□ -1.25
UBXN4-205ENST00000467065 KMT2EQ8IZD2 1858 aa7.24□□□□□ -1.25
UBXN4-205ENST00000467065 TECTAO75443 2155 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 BICDL2A1A5D9 508 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 FAM86C2PA6NEL3 165 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 HIDE1A8MVS5 230 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 BECN2A8MW95 431 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 PSMA7O14818 248 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 B4GALT5O43286 388 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 TSPAN1O60635 241 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 ZNF623O75123 536 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 HIP1RO75146 1068 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 GADD45BO75293 160 aaPredicted RBP7.23□□□□□ -1.25
UBXN4-205ENST00000467065 OFD1O75665 1012 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 GCNT3O95395 438 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 CAVIN2O95810 425 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 SKIP12755 728 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 COL9A1P20849 921 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 GLRA2P23416 452 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 HOXA11P31270 313 aaPredicted RBP7.23□□□□□ -1.25
UBXN4-205ENST00000467065 SLC12A3P55017 1021 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 PEX3P56589 373 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 PTENP60484 403 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 GRIN1Q05586 938 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 RNASELQ05823 741 aaKnown RBP7.23□□□□□ -1.25
UBXN4-205ENST00000467065 MBTD1Q05BQ5 628 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 SMAD2Q15796 467 aaKnown RBP7.23□□□□□ -1.25
UBXN4-205ENST00000467065 DUSP6Q16828 381 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 TMEM119Q4V9L6 283 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 NOMO2Q5JPE7 1267 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 UBXN11Q5T124 520 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 SLFN12LQ6IEE8 588 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 LLGL2Q6P1M3 1020 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 TMC7Q7Z402 723 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 CDR2LQ86X02 465 aaPredicted RBP7.23□□□□□ -1.25
UBXN4-205ENST00000467065 CREBRFQ8IUR6 639 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 FMR1NBQ8N0W7 255 aaPredicted RBP7.23□□□□□ -1.25
UBXN4-205ENST00000467065 TRIML1Q8N9V2 468 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 SMRP1Q8NCR6 262 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 BCL7CQ8WUZ0 217 aaPredicted RBP7.23□□□□□ -1.25
UBXN4-205ENST00000467065 AUTS2Q8WXX7 1259 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 ANP32BQ92688 251 aaKnown RBP7.23□□□□□ -1.25
UBXN4-205ENST00000467065 TMEM169Q96HH4 297 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 ACCSQ96QU6 501 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 TRAIPQ9BWF2 469 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 APOL6Q9BWW8 343 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 APOL5Q9BWW9 433 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 EIF2AQ9BY44 585 aaKnown RBP7.23□□□□□ -1.25
UBXN4-205ENST00000467065 NRDE2Q9H7Z3 1164 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 ANO10Q9NW15 660 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 PUF60Q9UHX1 559 aaKnown RBP7.23□□□□□ -1.25
UBXN4-205ENST00000467065 LZTS1Q9Y250 596 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 HPSEQ9Y251 543 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 WDFY4Q6ZS81 3184 aa7.23□□□□□ -1.25
UBXN4-205ENST00000467065 ZNF318Q5VUA4 2279 aa7.22□□□□□ -1.25
UBXN4-205ENST00000467065 FAM237AA0A1B0GTK4 181 aa7.22□□□□□ -1.25
UBXN4-205ENST00000467065 SFI1A8K8P3 1242 aa7.22□□□□□ -1.25
UBXN4-205ENST00000467065 SMTNL1A8MU46 457 aa7.22□□□□□ -1.25
UBXN4-205ENST00000467065 GOLGA6L19H0YKK7 550 aa7.22□□□□□ -1.25
UBXN4-205ENST00000467065 K7ENM7 598 aa7.22□□□□□ -1.25
UBXN4-205ENST00000467065 CALUO43852 315 aaPredicted RBP7.22□□□□□ -1.25
UBXN4-205ENST00000467065 POMCP01189 267 aa7.22□□□□□ -1.25
UBXN4-205ENST00000467065 MAPTP10636 758 aaKnown RBP7.22□□□□□ -1.25
UBXN4-205ENST00000467065 ARF4P18085 180 aaPredicted RBP7.22□□□□□ -1.25
UBXN4-205ENST00000467065 CDK11BP21127 795 aaKnown RBP7.22□□□□□ -1.25
UBXN4-205ENST00000467065 AXLP30530 894 aa7.22□□□□□ -1.25
UBXN4-205ENST00000467065 ARL2P36404 184 aa7.22□□□□□ -1.25
UBXN4-205ENST00000467065 NAMPTP43490 491 aa7.22□□□□□ -1.25
UBXN4-205ENST00000467065 SLC11A1P49279 550 aa7.22□□□□□ -1.25
UBXN4-205ENST00000467065 ALDH7A1P49419 539 aaKnown RBP7.22□□□□□ -1.25
UBXN4-205ENST00000467065 LIG4P49917 911 aa7.22□□□□□ -1.25
UBXN4-205ENST00000467065 AFF1P51825 1210 aaKnown RBP7.22□□□□□ -1.25
UBXN4-205ENST00000467065 KRT17Q04695 432 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms