RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 ISCUQ9H1K1 167 aa16.58■□□□□ 0.24
SNED1-208ENST00000466618 XPNPEP3Q9NQH7 507 aa16.58■□□□□ 0.24
SNED1-208ENST00000466618 SLC12A4Q9UP95 1085 aa16.58■□□□□ 0.24
SNED1-208ENST00000466618 POTEB3A0JP26 581 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 MYADML2A6NDP7 307 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 CCT8L1PA6NM43 557 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 DCDC2CA8MYV0 355 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 AKR1B10O60218 316 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 ZNF862O60290 1169 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 RHOBTB3O94955 611 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 ANP32DO95626 131 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 PGK1P00558 417 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 STAT6P42226 847 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 CPT1AP50416 773 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 PSMC5P62195 406 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 CTTNQ14247 550 aaKnown RBP16.57■□□□□ 0.24
SNED1-208ENST00000466618 ASTE1Q2TB18 679 aaPredicted RBP16.57■□□□□ 0.24
SNED1-208ENST00000466618 AGBL2Q5U5Z8 902 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 CCSAPQ6IQ19 270 aaPredicted RBP16.57■□□□□ 0.24
SNED1-208ENST00000466618 POTEBQ6S5H4 581 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 KCTD17Q8N5Z5 321 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 KLHDC9Q8NEP7 349 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 ZNF570Q96NI8 536 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 LXNQ9BS40 222 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 C16orf70Q9BSU1 422 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 NDST4Q9H3R1 872 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 GABBR1Q9UBS5 961 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 L3MBTL1Q9Y468 752 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 KDM3AQ9Y4C1 1321 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 SMNDC1O75940 238 aaKnown RBP eCLIP16.57■□□□□ 0.24
SNED1-208ENST00000466618 STBD1O95210 358 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 CCL5P13501 91 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 ATP4AP20648 1035 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 CST5P28325 142 aaPredicted RBP16.57■□□□□ 0.24
SNED1-208ENST00000466618 FSCN1Q16658 493 aaKnown RBP16.57■□□□□ 0.24
SNED1-208ENST00000466618 DGKDQ16760 1214 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 PLPPR4Q7Z2D5 763 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 C4orf19Q8IY42 314 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 MICAL1Q8TDZ2 1067 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.57■□□□□ 0.247e-9■■■■■ 72.6
SNED1-208ENST00000466618 CCDC47Q96A33 483 aaKnown RBP16.57■□□□□ 0.24
SNED1-208ENST00000466618 SIK3Q9Y2K2 1263 aa16.57■□□□□ 0.24
SNED1-208ENST00000466618 LGALS2P05162 132 aa16.56■□□□□ 0.24
SNED1-208ENST00000466618 CTNNA1P35221 906 aaKnown RBP16.56■□□□□ 0.24
SNED1-208ENST00000466618 PEX19P40855 299 aa16.56■□□□□ 0.24
SNED1-208ENST00000466618 MTIF2P46199 727 aaKnown RBP16.56■□□□□ 0.24
SNED1-208ENST00000466618 STAT5BP51692 787 aa16.56■□□□□ 0.24
SNED1-208ENST00000466618 BEX3Q00994 111 aa16.56■□□□□ 0.24
SNED1-208ENST00000466618 GFPT1Q06210 699 aaPredicted RBP16.56■□□□□ 0.24
SNED1-208ENST00000466618 POTEGQ6S5H5 508 aa16.56■□□□□ 0.24
SNED1-208ENST00000466618 KCNK18Q7Z418 384 aa16.56■□□□□ 0.24
SNED1-208ENST00000466618 TPH2Q8IWU9 490 aa16.56■□□□□ 0.24
SNED1-208ENST00000466618 RNF10Q8N5U6 811 aaKnown RBP16.56■□□□□ 0.24
SNED1-208ENST00000466618 EIF1ADQ8N9N8 165 aaKnown RBP16.56■□□□□ 0.24
SNED1-208ENST00000466618 PARD3BQ8TEW8 1205 aa16.56■□□□□ 0.24
SNED1-208ENST00000466618 CALML4Q96GE6 196 aa16.56■□□□□ 0.24
SNED1-208ENST00000466618 SPAG5Q96R06 1193 aa16.56■□□□□ 0.24
SNED1-208ENST00000466618 NT5C3AQ9H0P0 336 aa16.56■□□□□ 0.24
SNED1-208ENST00000466618 NEUROG2Q9H2A3 272 aa16.56■□□□□ 0.24
SNED1-208ENST00000466618 ZNF302Q9NR11 478 aa16.56■□□□□ 0.24
SNED1-208ENST00000466618 NOVA2Q9UNW9 492 aaKnown RBP16.56■□□□□ 0.24
SNED1-208ENST00000466618 KIAA1024Q9UPX6 916 aa16.56■□□□□ 0.24
SNED1-208ENST00000466618 BHMG1C9JSJ3 638 aaPredicted RBP16.55■□□□□ 0.24
SNED1-208ENST00000466618 GSTA1P08263 222 aa16.55■□□□□ 0.24
SNED1-208ENST00000466618 C6orf222P0C671 652 aaPredicted RBP16.55■□□□□ 0.24
SNED1-208ENST00000466618 PLCG1P19174 1290 aa16.55■□□□□ 0.24
SNED1-208ENST00000466618 DNA2P51530 1060 aa16.55■□□□□ 0.24
SNED1-208ENST00000466618 AP1ARQ63HQ0 302 aa16.55■□□□□ 0.24
SNED1-208ENST00000466618 ANKRD40Q6AI12 368 aa16.55■□□□□ 0.24
SNED1-208ENST00000466618 RUFY4Q6ZNE9 571 aa16.55■□□□□ 0.24
SNED1-208ENST00000466618 CPLX4Q7Z7G2 160 aa16.55■□□□□ 0.24
SNED1-208ENST00000466618 TRIM50Q86XT4 487 aa16.55■□□□□ 0.24
SNED1-208ENST00000466618 CCDC63Q8NA47 563 aa16.55■□□□□ 0.24
SNED1-208ENST00000466618 ATP6V0A1Q93050 837 aa16.55■□□□□ 0.24
SNED1-208ENST00000466618 P2RX5Q93086 422 aa16.55■□□□□ 0.24
SNED1-208ENST00000466618 IQCDQ96DY2 449 aa16.55■□□□□ 0.24
SNED1-208ENST00000466618 DHTKD1Q96HY7 919 aaPredicted RBP16.55■□□□□ 0.24
SNED1-208ENST00000466618 TMEM59LQ9UK28 342 aa16.55■□□□□ 0.24
SNED1-208ENST00000466618 DOCK5Q9H7D0 1870 aa16.55■□□□□ 0.24
SNED1-208ENST00000466618 LRRC53A6NM62 1247 aa16.55■□□□□ 0.24
SNED1-208ENST00000466618 CCNE1P24864 410 aa16.55■□□□□ 0.24
SNED1-208ENST00000466618 PSMC6P62333 389 aa16.55■□□□□ 0.24
SNED1-208ENST00000466618 AGAP11Q8TF27 550 aa16.55■□□□□ 0.24
SNED1-208ENST00000466618 TCP11Q8WWU5 503 aa16.55■□□□□ 0.24
SNED1-208ENST00000466618 PLIN2Q99541 437 aa16.55■□□□□ 0.24
SNED1-208ENST00000466618 SMARCAD1Q9H4L7 1026 aa16.55■□□□□ 0.24
SNED1-208ENST00000466618 SPC25Q9HBM1 224 aa16.55■□□□□ 0.24
SNED1-208ENST00000466618 LRRC4CQ9HCJ2 640 aa16.55■□□□□ 0.24
SNED1-208ENST00000466618 BLOC1S4Q9NUP1 217 aa16.55■□□□□ 0.24
SNED1-208ENST00000466618 ETAA1Q9NY74 926 aa16.55■□□□□ 0.24
SNED1-208ENST00000466618 PALMO75781 387 aa16.54■□□□□ 0.24
SNED1-208ENST00000466618 FTCDO95954 541 aa16.54■□□□□ 0.24
SNED1-208ENST00000466618 ALADP13716 330 aa16.54■□□□□ 0.24
SNED1-208ENST00000466618 CDC25CP30307 473 aa16.54■□□□□ 0.24
SNED1-208ENST00000466618 SLC26A2P50443 739 aa16.54■□□□□ 0.24
SNED1-208ENST00000466618 HLTFQ14527 1009 aaKnown RBP eCLIP16.54■□□□□ 0.24
SNED1-208ENST00000466618 BRDTQ58F21 947 aaPredicted RBP16.54■□□□□ 0.24
SNED1-208ENST00000466618 ODF2Q5BJF6 829 aa16.54■□□□□ 0.24
SNED1-208ENST00000466618 GNASQ5JWF2 1037 aa16.54■□□□□ 0.24
SNED1-208ENST00000466618 FAM160B1Q5W0V3 765 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms