RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 SHC3Q92529 594 aa22.81■■□□□ 1.24
PPP1R3F-203ENST00000466508 FAM84AQ96KN4 292 aa22.81■■□□□ 1.24
PPP1R3F-203ENST00000466508 AP5M1Q9H0R1 490 aa22.81■■□□□ 1.24
PPP1R3F-203ENST00000466508 SETD4Q9NVD3 440 aa22.81■■□□□ 1.24
PPP1R3F-203ENST00000466508 CPSF3Q9UKF6 684 aaKnown RBP22.81■■□□□ 1.24
PPP1R3F-203ENST00000466508 CAPN6Q9Y6Q1 641 aa22.81■■□□□ 1.24
PPP1R3F-203ENST00000466508 NRCAMQ92823 1304 aa22.8■■□□□ 1.24
PPP1R3F-203ENST00000466508 CASP8AP2Q9UKL3 1982 aa22.8■■□□□ 1.24
PPP1R3F-203ENST00000466508 TACC1O75410 805 aa22.8■■□□□ 1.24
PPP1R3F-203ENST00000466508 HSPA8P11142 646 aaKnown RBP22.8■■□□□ 1.24
PPP1R3F-203ENST00000466508 PSMC4P43686 418 aa22.8■■□□□ 1.24
PPP1R3F-203ENST00000466508 LACTBP83111 547 aaPredicted RBP22.8■■□□□ 1.24
PPP1R3F-203ENST00000466508 TMEM132AQ24JP5 1023 aa22.8■■□□□ 1.24
PPP1R3F-203ENST00000466508 FAM71AQ8IYT1 594 aa22.8■■□□□ 1.24
PPP1R3F-203ENST00000466508 KIAA0319LQ8IZA0 1049 aa22.8■■□□□ 1.24
PPP1R3F-203ENST00000466508 SLC30A5Q8TAD4 765 aa22.8■■□□□ 1.24
PPP1R3F-203ENST00000466508 TSC1Q92574 1164 aa22.8■■□□□ 1.24
PPP1R3F-203ENST00000466508 ANO9A1A5B4 782 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 SMIM10L2AP0DMW4 78 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 SMIM10L2BP0DMW5 78 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 PIK3CAP42336 1068 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 GCNT1Q02742 428 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 BIRC3Q13489 604 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 AMHR2Q16671 573 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 NFRKBQ6P4R8 1299 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 ENOSF1Q7L5Y1 443 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 LNX1Q8TBB1 728 aaPredicted RBP22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 FAM81BQ96LP2 452 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 PPP1R16BQ96T49 567 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 PACSIN1Q9BY11 444 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 C1orf112Q9NSG2 853 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 SALL4Q9UJQ4 1053 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 TSKSQ9UJT2 592 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 CDC23Q9UJX2 597 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 TRIP12Q14669 1992 aaPredicted RBP22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 MOCS3O95396 460 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 HLA-DRAP01903 254 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 AKR1A1P14550 325 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 AP3M2P53677 418 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 IRX5P78411 483 aaPredicted RBP22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 AMPD2Q01433 879 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 MFSD10Q14728 455 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 EEF1DP3Q658K8 133 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 ZNF410Q86VK4 478 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 WDR49Q8IV35 697 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 GLYCTKQ8IVS8 523 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 NLRP7Q8WX94 980 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 ALS2CR12Q96Q35 445 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 PI4K2AQ9BTU6 479 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 ARHGAP39Q9C0H5 1083 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 PRDM10Q9NQV6 1147 aa22.79■■□□□ 1.24
PPP1R3F-203ENST00000466508 BTNL10A8MVZ5 291 aa22.78■■□□□ 1.24
PPP1R3F-203ENST00000466508 SURF1Q15526 300 aa22.78■■□□□ 1.24
PPP1R3F-203ENST00000466508 COL13A1Q5TAT6 717 aaPredicted RBP22.78■■□□□ 1.24
PPP1R3F-203ENST00000466508 MNS1Q8NEH6 495 aa22.78■■□□□ 1.24
PPP1R3F-203ENST00000466508 OR5B17Q8NGF7 314 aa22.78■■□□□ 1.24
PPP1R3F-203ENST00000466508 TATDN2Q93075 761 aa22.78■■□□□ 1.24
PPP1R3F-203ENST00000466508 NOX5Q96PH1 765 aa22.78■■□□□ 1.24
PPP1R3F-203ENST00000466508 CARD6Q9BX69 1037 aa22.78■■□□□ 1.24
PPP1R3F-203ENST00000466508 CDT1Q9H211 546 aa22.78■■□□□ 1.24
PPP1R3F-203ENST00000466508 HAS3O00219 553 aa22.77■■□□□ 1.24
PPP1R3F-203ENST00000466508 ENC1O14682 589 aa22.77■■□□□ 1.24
PPP1R3F-203ENST00000466508 CSDE1O75534 798 aaKnown RBP22.77■■□□□ 1.24
PPP1R3F-203ENST00000466508 VNN1O95497 513 aa22.77■■□□□ 1.24
PPP1R3F-203ENST00000466508 CHMP4BP1P59074 171 aa22.77■■□□□ 1.24
PPP1R3F-203ENST00000466508 WDR44Q5JSH3 913 aa22.77■■□□□ 1.24
PPP1R3F-203ENST00000466508 LRRN4CLQ8ND94 238 aa22.77■■□□□ 1.24
PPP1R3F-203ENST00000466508 SCLT1Q96NL6 688 aa22.77■■□□□ 1.24
PPP1R3F-203ENST00000466508 RNF186Q9NXI6 227 aa22.77■■□□□ 1.24
PPP1R3F-203ENST00000466508 MBLAC1A4D2B0 266 aaPredicted RBP22.77■■□□□ 1.24
PPP1R3F-203ENST00000466508 TRPA1O75762 1119 aa22.77■■□□□ 1.24
PPP1R3F-203ENST00000466508 ATP1A1P05023 1023 aaKnown RBP22.77■■□□□ 1.24
PPP1R3F-203ENST00000466508 USP8P40818 1118 aa22.77■■□□□ 1.24
PPP1R3F-203ENST00000466508 PSEN2P49810 448 aa22.77■■□□□ 1.24
PPP1R3F-203ENST00000466508 FSCN1Q16658 493 aaKnown RBP22.77■■□□□ 1.24
PPP1R3F-203ENST00000466508 PAPD7Q5XG87 772 aaKnown RBP22.77■■□□□ 1.24
PPP1R3F-203ENST00000466508 CDR2LQ86X02 465 aaPredicted RBP22.77■■□□□ 1.24
PPP1R3F-203ENST00000466508 THNSL1Q8IYQ7 743 aa22.77■■□□□ 1.24
PPP1R3F-203ENST00000466508 U2AF1L4Q8WU68 220 aaKnown RBP22.77■■□□□ 1.24
PPP1R3F-203ENST00000466508 AGPAT1Q99943 283 aa22.77■■□□□ 1.24
PPP1R3F-203ENST00000466508 SAGE1Q9NXZ1 904 aa22.77■■□□□ 1.24
PPP1R3F-203ENST00000466508 INTUQ9ULD6 942 aa22.77■■□□□ 1.24
PPP1R3F-203ENST00000466508 JRKLQ9Y4A0 524 aa22.77■■□□□ 1.24
PPP1R3F-203ENST00000466508 BEX3Q00994 111 aa22.76■■□□□ 1.23
PPP1R3F-203ENST00000466508 TRAPPC11Q7Z392 1133 aa22.76■■□□□ 1.23
PPP1R3F-203ENST00000466508 SRGAP1Q7Z6B7 1085 aa22.76■■□□□ 1.23
PPP1R3F-203ENST00000466508 TRPV1Q8NER1 839 aa22.76■■□□□ 1.23
PPP1R3F-203ENST00000466508 EPS8L1Q8TE68 723 aa22.76■■□□□ 1.23
PPP1R3F-203ENST00000466508 GABRQQ9UN88 632 aa22.76■■□□□ 1.23
PPP1R3F-203ENST00000466508 SMIM35A0A1B0GVV1 85 aa22.75■■□□□ 1.23
PPP1R3F-203ENST00000466508 DUSP11O75319 330 aaKnown RBP22.75■■□□□ 1.23
PPP1R3F-203ENST00000466508 TBC1D8O95759 1140 aa22.75■■□□□ 1.23
PPP1R3F-203ENST00000466508 MYL3P08590 195 aa22.75■■□□□ 1.23
PPP1R3F-203ENST00000466508 H2AFZP0C0S5 128 aa22.75■■□□□ 1.23
PPP1R3F-203ENST00000466508 CYBAP13498 195 aa22.75■■□□□ 1.23
PPP1R3F-203ENST00000466508 TNFAIP3P21580 790 aa22.75■■□□□ 1.23
PPP1R3F-203ENST00000466508 FLT3LGP49771 235 aa22.75■■□□□ 1.23
PPP1R3F-203ENST00000466508 CDC42EP1Q00587 391 aa22.75■■□□□ 1.23
PPP1R3F-203ENST00000466508 NCBP1Q09161 790 aaKnown RBP22.75■■□□□ 1.23
PPP1R3F-203ENST00000466508 MFSD14CQ5VZR4 134 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms